Affinage

CASP2

Caspase-2 · UniProt P42575

Length
452 aa
Mass
50.7 kDa
Annotated
2026-06-09
43 papers in source corpus 13 papers cited in narrative 13 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CASP2 (ICH-1/Nedd2) is a cysteine protease that functions as a pro-apoptotic regulator, with alternative splicing of the locus producing both a death-inducing long isoform and a death-suppressing short isoform (PMID:8087842). The enzyme is synthesized as an inactive precursor that must dimerize—a step requiring both the prodomain and the carboxyl-terminal residues—before undergoing proteolytic processing at defined aspartate residues to generate active p19+p12 subunits, with dimerization preceding processing and self-processing correlating with death induction (PMID:9506977). The prodomain additionally serves as a nuclear localization signal, sufficient to redirect normally cytoplasmic caspase-3 to the nucleus (PMID:9733748). CASP2 is activated early in apoptosis, ahead of effector caspases (PMID:9148927), and cleaves PARP in a manner identical to that seen in apoptotic cells (PMID:7642516); its own precursor is processed by caspase-1, caspase-3, and granzyme B, integrating it into both intrinsic apoptotic and cytotoxic lymphocyte killing pathways (PMID:9078393). Genetic loss-of-function studies establish CASP2 as a required mediator of trophic factor (NGF/serum) deprivation-induced death in neurons, but not of all apoptotic stimuli, and in this paradigm it acts independently of caspase-3-like activity (PMID:9045720, PMID:9801360). Beyond apoptosis, CASP2 acts as an endogenous repressor of autophagy through the AMPK/mTOR/MAPK pathway, with its loss elevating ROS as an upstream autophagy-inducing signal (PMID:24879153). Biallelic truncating CASP2 variants cause a neurodevelopmental disorder with lissencephaly and pachygyria, implicating its PIDDosome activity in human cortical development (PMID:37880421).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 1994 High

    Established that a single caspase locus can encode opposing regulators of cell death, defining CASP2's dual potential through alternative splicing.

    Evidence Overexpression of ICH-1L vs ICH-1S isoforms in mammalian cells with death assays

    PMID:8087842

    Open questions at the time
    • Physiological balance of the two isoforms in vivo not established
    • Substrates and catalytic mechanism not yet defined
  2. 1994 High

    Positioned CASP2 within the apoptotic hierarchy by showing BCL-2 suppresses CASP2-induced death.

    Evidence Overexpression in fibroblast and neuroblastoma cells with BCL-2 rescue

    PMID:7958843

    Open questions at the time
    • Whether BCL-2 acts directly on CASP2 or upstream not resolved
    • Endogenous requirement not tested by this gain-of-function approach
  3. 1995 Medium

    Demonstrated an endogenous pro-apoptotic requirement for CASP2 beyond overexpression, and identified PARP as a substrate.

    Evidence Antisense suppression in FDC-P1 cells; COS co-transfection and in vitro cleavage of PARP with recombinant enzyme

    PMID:7615091 PMID:7642516

    Open questions at the time
    • Antisense specificity from a single lab/method
    • Full substrate repertoire unknown
  4. 1996 High

    Defined how the CASP2 precursor is activated, placing it as a substrate of upstream proteases including granzyme B.

    Evidence In vitro cleavage of the p51 precursor by caspase-3, caspase-1, Mch2, Nedd2, and granzyme B with inhibitor controls

    PMID:9078393

    Open questions at the time
    • Relative physiological contribution of each protease unknown
    • Order of CASP2 relative to these proteases in cells not resolved
  5. 1997 High

    Established a stimulus-specific, non-redundant role for CASP2 in neuronal apoptosis driven by trophic factor withdrawal.

    Evidence Antisense knockdown in PC12 cells and sympathetic neurons; comparison across distinct death stimuli

    PMID:9045720

    Open questions at the time
    • Molecular trigger linking trophic deprivation to CASP2 activation unknown
    • Downstream effectors in neurons not mapped
  6. 1997 Medium

    Provided temporal evidence that CASP2 activation precedes effector caspase activation, implying an apical position.

    Evidence Western detection of processed subunits across multiple stimuli and resistant cell lines

    PMID:9148927

    Open questions at the time
    • No direct epistasis experiment
    • Activation timing differs by stimulus
  7. 1998 High

    Resolved the activation mechanism—dimerization requiring prodomain and C-terminus precedes aspartate processing—and uncovered prodomain-directed nuclear targeting.

    Evidence Yeast two-hybrid dimerization, aspartate mutagenesis, in vitro processing; GFP fusions and caspase-3 domain swaps

    PMID:9506977 PMID:9733748

    Open questions at the time
    • Physiological dimerization platform (e.g. activating complex) not identified here
    • Functional consequence of nuclear localization for specific substrates unclear
  8. 1998 High

    Showed CASP2-dependent neuronal death and D333 processing proceed independently of caspase-3-like activity, refining the apical-vs-effector question.

    Evidence Selective caspase inhibitors and antisense in trophic-deprived PC12 cells and sympathetic neurons

    PMID:9801360

    Open questions at the time
    • Identity of the executioner downstream of CASP2 in neurons unresolved
    • Apparent conflict with general upstream-of-caspase-3 model not reconciled across paradigms
  9. 2014 Medium

    Identified a non-apoptotic function: CASP2 represses autophagy via AMPK/mTOR/MAPK signaling, with ROS as an upstream cue.

    Evidence Casp2 knockout/knockdown/re-insertion in MEFs and tissues; autophagy and ROS markers

    PMID:24879153

    Open questions at the time
    • Direct substrate or protein target linking CASP2 to the pathway not identified
    • Single-lab finding
  10. 2023 Medium

    Linked CASP2 loss-of-function to human disease, implicating its PIDDosome role in cortical development.

    Evidence Exome sequencing, RNA splice analysis, and family segregation in lissencephaly/pachygyria patients

    PMID:37880421

    Open questions at the time
    • No in vitro reconstitution of PIDDosome dysfunction
    • Mechanism connecting CASP2 to neuronal migration not established
  11. 2024 Low

    Described dual transcriptional/post-transcriptional control of CASP2 in cancer cells uncoupling its mRNA induction from protein output.

    Evidence Reporter assays, knockdown/overexpression of E2F1 and HuR in esophageal adenocarcinoma cells

    PMID:39524140

    Open questions at the time
    • Single study with limited orthogonal validation
    • Generality beyond esophageal adenocarcinoma unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • The molecular composition and activating platform of the human CASP2/PIDDosome and how it connects to both cortical development and autophagy repression remain unresolved.
  • No reconstituted human PIDDosome in the corpus
  • Direct CASP2 substrate(s) in autophagy and neurodevelopment not identified

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 3 GO:0016787 hydrolase activity 2
Localization
GO:0005634 nucleus 1 GO:0005829 cytosol 1
Pathway
R-HSA-5357801 Programmed Cell Death 3 R-HSA-9612973 Autophagy 1
Complex memberships
PIDDosome

Evidence

Reading pass · 13 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1994 CASP2 (ICH-1/Nedd2) encodes a cysteine protease that induces programmed cell death when overexpressed (ICH-1L isoform), while the alternatively spliced short isoform (ICH-1S/312 aa) suppresses serum deprivation-induced cell death, demonstrating that alternative splicing produces both positive and negative regulators of apoptosis from the same locus. Overexpression of alternatively spliced isoforms in mammalian cells; cell death assays Cell High 8087842
1994 Overexpression of Nedd2 (CASP2) in cultured fibroblast and neuroblastoma cells induces apoptosis, and this apoptosis is suppressed by co-expression of human BCL-2, placing CASP2 downstream of or in parallel with BCL-2 in the apoptotic pathway. Overexpression in cultured cells; BCL-2 rescue experiment Genes & development High 7958843
1995 CASP2 (Nedd2) is required for apoptosis: antisense suppression of Nedd2 in factor-dependent FDC-P1 cells significantly inhibits cell death upon cytokine withdrawal, demonstrating a direct pro-apoptotic role. Antisense expression; cell death assay upon cytokine withdrawal FEBS letters Medium 7615091
1995 CASP2 (Nedd2) can cleave poly(ADP-ribose) polymerase (PARP) in a manner identical to that observed in apoptotic cells, both in a co-transfection assay and in vitro with purified recombinant enzyme, establishing PARP as a substrate of CASP2. COS cell co-transfection assay; in vitro cleavage with purified recombinant enzyme The Journal of biological chemistry High 7642516
1996 The p51 Nedd2 precursor (pro-CASP2) is processed in vitro by active CPP32 (caspase-3) and ICE (caspase-1), and to a lesser extent by Mch2 and Nedd2 itself, into p19+p12 subunits; granzyme B also cleaves pro-Nedd2, placing CASP2 as a downstream effector in cytotoxic T lymphocyte-mediated killing. In vitro cleavage assay using cell extracts and purified proteases; inhibitor studies Genes to cells : devoted to molecular & cellular mechanisms High 9078393
1997 CASP2 (Nedd2) is required for apoptosis induced by trophic factor (NGF/serum) deprivation in PC12 cells and sympathetic neurons; antisense oligonucleotide-mediated knockdown of Nedd2 rescues these cells from death. Nedd2 is not required for apoptosis induced by SOD1 downregulation, demonstrating stimulus-specific roles for distinct caspases. Antisense oligonucleotide knockdown; Western immunoblotting; immunohistochemistry; cell death assays The Journal of neuroscience : the official journal of the Society for Neuroscience High 9045720
1997 CASP2 (Nedd2) is activated early during apoptosis induced by multiple stimuli, prior to activation of caspase-3 (CPP32), suggesting CASP2 acts upstream of effector caspases. Western blot detection of processed subunits; comparison of activation kinetics across multiple apoptotic stimuli and resistant cell lines The Journal of biological chemistry Medium 9148927
1998 Dimerization of the Nedd2/CASP2 precursor requires both the prodomain and the carboxyl-terminal residues; dimerization precedes processing; in vitro processing by recombinant active Nedd2 defined aspartate residues critical for processing, and self-processing correlates with induction of cell death. Yeast two-hybrid dimerization assay; site-directed mutagenesis of aspartate residues; in vitro processing with recombinant enzyme; cell death assays The Journal of biological chemistry High 9506977
1998 The prodomain of CASP2 (Nedd2) is required for nuclear localization of the precursor; both precursor and processed caspase-2 localize to cytoplasmic and nuclear compartments. The prodomain fused to caspase-3 (normally cytoplasmic) is sufficient to transport caspase-3 to the nucleus, demonstrating a novel nuclear transport function for the CASP2 prodomain. GFP fusion constructs; live-cell fluorescence microscopy; domain-swap experiments with caspase-3 The Journal of biological chemistry High 9733748
1998 CASP2 processing at D333 (forming a 37 kDa N-terminal product) and cell death in trophic factor-deprived PC12 cells and sympathetic neurons occur independently of caspase-3-like activity; caspase-3-like activity is neither necessary nor sufficient for death in this paradigm, and CASP2 is not upstream of caspase-3-like activity. Selective caspase inhibitors (DEVD-FMK vs. BAF/zVAD); antisense oligonucleotides; Western blot detection of processing; cell death assays The Journal of neuroscience : the official journal of the Society for Neuroscience High 9801360
2014 CASP2 is an endogenous repressor of autophagy; knockout or knockdown of CASP2 upregulates autophagy in multiple cell types and tissues via the canonical AMP-activated protein kinase/mTOR/MAPK pathway, and re-insertion of Casp2 in casp2−/− MEFs suppresses autophagy. Enhanced ROS production following CASP2 loss acts as an upstream signal for autophagy induction. Casp2 knockout MEFs; knockdown; Casp2 re-insertion rescue; autophagy pathway markers (AMPK, mTOR, MAPK, ATG proteins); ROS measurement Autophagy Medium 24879153
2023 Biallelic truncating variants in CASP2 cause a neurodevelopmental disorder with lissencephaly and pachygyria, phenotypically similar to CRADD- and PIDD1-related disorders, demonstrating that CASP2 function as a component of the PIDDosome complex is required for normal human cortical development. Exome sequencing; RNA splice analysis (cryptic splice sites); family-based segregation analysis; clinical neuroimaging European journal of human genetics : EJHG Medium 37880421
2024 CCN1 upregulates CASP2 mRNA transcription via E2F1 (through RB1 phosphorylation mediated by downregulation of p16/p21), but simultaneously upregulates HuR which binds CASP2 mRNA and blocks its protein translation, resulting in no CASP2 protein contribution to CCN1-induced apoptosis in esophageal adenocarcinoma cells. Reporter assays; Western blot; knockdown/overexpression; mRNA-protein level dissection Journal of cell communication and signaling Low 39524140

Source papers

Stage 0 corpus · 43 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1994 Ich-1, an Ice/ced-3-related gene, encodes both positive and negative regulators of programmed cell death. Cell 824 8087842
1994 Induction of apoptosis by the mouse Nedd2 gene, which encodes a protein similar to the product of the Caenorhabditis elegans cell death gene ced-3 and the mammalian IL-1 beta-converting enzyme. Genes & development 601 7958843
1998 Alteration of proteins regulating apoptosis, Bcl-2, Bcl-x, Bax, Bak, Bad, ICH-1 and CPP32, in Alzheimer's disease. Brain research 226 9507158
1995 Cleavage of poly(ADP-ribose) polymerase by interleukin-1 beta converting enzyme and its homologs TX and Nedd-2. The Journal of biological chemistry 161 7642516
1997 Nedd2 is required for apoptosis after trophic factor withdrawal, but not superoxide dismutase (SOD1) downregulation, in sympathetic neurons and PC12 cells. The Journal of neuroscience : the official journal of the Society for Neuroscience 145 9045720
1998 Prodomain-dependent nuclear localization of the caspase-2 (Nedd2) precursor. A novel function for a caspase prodomain. The Journal of biological chemistry 139 9733748
1997 Functional activation of Nedd2/ICH-1 (caspase-2) is an early process in apoptosis. The Journal of biological chemistry 130 9148927
2005 T25 repeat in the 3' untranslated region of the CASP2 gene: a sensitive and specific marker for microsatellite instability in colorectal cancer. Cancer research 123 16166278
1998 Dimerization and autoprocessing of the Nedd2 (caspase-2) precursor requires both the prodomain and the carboxyl-terminal regions. The Journal of biological chemistry 100 9506977
1998 Caspase-2 (Nedd-2) processing and death of trophic factor-deprived PC12 cells and sympathetic neurons occur independently of caspase-3 (CPP32)-like activity. The Journal of neuroscience : the official journal of the Society for Neuroscience 95 9801360
1997 Evaluation of the CASP2 docking section. Proteins 62 9485512
2014 A nonapoptotic role for CASP2/caspase 2: modulation of autophagy. Autophagy 61 24879153
2014 Combined suppression of CASP2 and CASP6 protects retinal ganglion cells from apoptosis and promotes axon regeneration through CNTF-mediated JAK/STAT signalling. Brain : a journal of neurology 57 24727569
1996 Processing of the Nedd2 precursor by ICE-like proteases and granzyme B. Genes to cells : devoted to molecular & cellular mechanisms 57 9078393
1997 Inhibitors of trypsin-like serine proteases inhibit processing of the caspase Nedd-2 and protect PC12 cells and sympathetic neurons from death evoked by withdrawal of trophic support. Journal of neurochemistry 56 9326271
2017 BECN1-dependent CASP2 incomplete autophagy induction by binding to rabies virus phosphoprotein. Autophagy 55 28129024
2000 Tumor necrosis factor-alpha-induced apoptosis in olfactory epithelium in vitro: possible roles of caspase 1 (ICE), caspase 2 (ICH-1), and caspase 3 (CPP32). Experimental neurology 55 10964483
1997 Up-regulation of the Nedd2 gene encoding an ICE/Ced-3-like cysteine protease in the gerbil brain after transient global ischemia. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism 55 9183288
1995 Inhibition of apoptosis by the expression of antisense Nedd2. FEBS letters 55 7615091
2022 miR-150-3p enhances neuroprotective effects of neural stem cell exosomes after hypoxic-ischemic brain injury by targeting CASP2. Neuroscience letters 52 35436510
1998 The ich1 gene of the mushroom Coprinus cinereus is essential for pileus formation in fruiting. Development (Cambridge, England) 46 9671586
1997 Meeting review: the Second meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP2), Asilomar, California, December 13-16, 1996. Folding & design 43 9135979
1997 CASP2: report on ab initio predictions. Proteins 40 9485507
1995 Apoptosis regulatory gene NEDD2 maps to human chromosome segment 7q34-35, a region frequently affected in haematological neoplasms. Human genetics 38 7789948
1997 CASP2 experiences with docking flexible ligands using FlexX. Proteins 37 9485516
2019 MiR-494 acts as a tumor promoter by targeting CASP2 in non-small cell lung cancer. Scientific reports 31 30816202
2017 Aging and calorie restriction regulate the expression of miR-125a-5p and its target genes Stat3, Casp2 and Stard13. Aging 31 28783714
1996 Chromosomal localization of the human genes, CPP32, Mch2, Mch3, and Ich-1, involved in cellular apoptosis. Biochemical and biophysical research communications 22 8780721
1997 A retrospective analysis of CASP2 threading predictions. Proteins 19 9485499
2001 CASP2 knowledge-based approach to distant homology recognition and fold prediction in CASP4. Proteins 18 11835484
1997 Characterization of the avian Ich-1 cDNA and expression of Ich-1L mRNA in the hen ovary. Gene 17 9224894
2000 Reactivation of Nedd-2, a developmentally down-regulated apoptotic gene, in apoptosis induced by a street strain of rabies virus. Journal of medical microbiology 16 11073159
1997 Cysteine protease CPP32, but not Ich1-L, is expressed in germinal center B cells and their neoplastic counterparts. Human pathology 16 9269827
1997 Blind predictions of local protein structure in CASP2 targets using the I-sites library. Proteins 15 9485508
1997 CASP2 molecular docking predictions with the LIGIN software. Proteins 15 9485514
1997 Fold assignments for amino acid sequences of the CASP2 experiment. Proteins 14 9485502
2023 Bi-allelic truncating variants in CASP2 underlie a neurodevelopmental disorder with lissencephaly. European journal of human genetics : EJHG 12 37880421
1998 Expression of Nedd2/ICH-1 (caspase-2) in the developing rat retina. Neuroscience research 12 9809666
1997 Characterization of a mammalian cell death gene Nedd2. Leukemia 11 9209399
2022 MiR-17-5p protects neonatal mice from hypoxic-ischemic brain damage by targeting Casp2. Neuroscience letters 9 35085690
2024 PANoptosis-related molecule CASP2 affects the immune microenvironment and immunotherapy response of hepatocellular carcinoma. Heliyon 6 38509889
2024 Cellular communication network 1 promotes CASP2 mRNA expression but suppresses its protein translation in esophageal adenocarcinoma. Journal of cell communication and signaling 1 39524140
2002 [Relationship between hepatitis C virus infection and expression of apoptosis-related gene bcl-2, bax and ICH-1 in hepatocellular carcinoma tissues]. Di 1 jun yi da xue xue bao = Academic journal of the first medical college of PLA 1 12297434

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