Affinage

CACNB2

Voltage-dependent L-type calcium channel subunit beta-2 · UniProt Q08289

Length
660 aa
Mass
73.6 kDa
Annotated
2026-06-09
25 papers in source corpus 12 papers cited in narrative 12 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CACNB2 encodes the CaVβ2 auxiliary subunit of L-type voltage-gated calcium channels, where it controls L-type calcium current and channel inactivation kinetics in cardiomyocytes (PMID:21357697, PMID:24752249). Its functional importance is developmentally staged: embryonic cardiomyocyte deletion is lethal with up to 75% loss of L-type current, whereas conditional excision in adult myocytes reduces current density by less than 29% without compensatory CaVβ upregulation or loss of CaV1.2 protein, indicating a moderate modulatory role in mature heart (PMID:21357697). As a MAGUK-family scaffold with conserved SH3 and guanylate kinase domains, CACNB2 also maintains N-cadherin-based adherens junctions and supports cardiac contractility, proliferation, and chamber morphogenesis, phenotypes that are at least partly dependent on L-type channel activity (PMID:22274990, PMID:18419826). Beyond its channel-associated functions, CACNB2 drives cell proliferation through the RAS-MAPK pathway independently of channel activity (PMID:30992131) and attenuates atrial fibrosis via modulation of TGF-β/Smad signaling (PMID:41748049). CACNB2 expression is post-transcriptionally repressed by miR-499/miR-499-5p binding to its 3' UTR—reducing CaV1.2 surface expression in both cardiomyocytes and neurons—and is silenced by promoter hypermethylation, with allele-specific promoter variants further tuning its expression (PMID:28239561, PMID:35969184, PMID:35894107, PMID:23744328). Disease-associated missense variants alter channel inactivation and cause loss-of-function, linking CACNB2 to short QT syndrome (S480L) and Brugada syndrome (S142F), with isogenic CRISPR correction rescuing the electrophysiological defects (PMID:35894107, PMID:35955449).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 2008 Medium

    Establishing that CACNB2 is a MAGUK-family protein with defined modular architecture framed it as more than a simple channel modulator, raising the possibility of scaffolding functions.

    Evidence cDNA cloning, sequence analysis, and RT-PCR of zebrafish and human loci

    PMID:18419826

    Open questions at the time
    • Domain architecture inferred from sequence without functional assignment of SH3/GK domains
    • Functional consequence of alternative splice variants not tested
  2. 2011 High

    Conditional adult cardiomyocyte knockout resolved whether CACNB2 is essential throughout life, showing its requirement for L-type current is developmentally staged—critical in embryo, only moderately modulatory in adult.

    Evidence Cre-lox conditional knockout with patch-clamp and protein quantification in adult mouse cardiomyocytes

    PMID:21357697

    Open questions at the time
    • Mechanism of the embryonic-to-adult shift in dependence unresolved
    • Why no compensatory CaVβ upregulation occurs not explained
  3. 2012 High

    Zebrafish loss-of-function dissected channel-dependent versus scaffolding roles, showing CACNB2 maintains N-cadherin adherens junctions and supports contractility, proliferation, and chamber morphogenesis.

    Evidence Morpholino knockdown with pharmacological LTCC modulation/rescue and N-cadherin immunostaining in zebrafish

    PMID:22274990

    Open questions at the time
    • Direct physical interaction of CACNB2 with N-cadherin complex not mapped
    • Extent to which scaffolding is separable from channel function not quantified
  4. 2013 Medium

    Allele-specific promoter reporter assays established that regulatory-region variants tune CACNB2 transcription, introducing expression-level control as a disease-relevant variable.

    Evidence Luciferase reporter assay of CACNB2 promoter fragment carrying rs7069292

    PMID:23744328

    Open questions at the time
    • In vivo physiological consequence of allele-specific expression not shown
    • Transcription factors mediating allelic difference unidentified
  5. 2014 High

    Recombinant electrophysiology of ASD-associated missense variants showed CACNB2 mutations alter channel inactivation kinetics, providing a biophysical basis for variant pathogenicity.

    Evidence Site-directed mutagenesis and whole-cell patch-clamp in HEK-293 cells

    PMID:24752249

    Open questions at the time
    • Phenotypic relevance in neurons or patients not demonstrated
    • Single heterologous system without native cell context
  6. 2017 High

    Identification of direct miR-499 binding to the CACNB2 3' UTR revealed a post-transcriptional control layer that also lowers the pore-forming CACNA1C subunit.

    Evidence Luciferase reporter, Argonaute pull-down, and bidirectional miRNA manipulation in HL-1 cardiomyocytes

    PMID:28239561

    Open questions at the time
    • Physiological contexts where miR-499 regulates CACNB2 in vivo not defined
    • Mechanism by which CACNB2 loss reduces CACNA1C protein not established
  7. 2019 Medium

    Overexpression experiments uncovered a channel-independent function, showing CACNB2 drives proliferation through RAS-MAPK without requiring LTCC activity.

    Evidence HEK293 overexpression with nifedipine dissection and Dahl Salt-Sensitive rat kidney expression analysis

    PMID:30992131

    Open questions at the time
    • Mechanistic link to RAS-MAPK is correlative without direct pathway reconstitution
    • Direct molecular partner connecting CACNB2 to RAS-MAPK unidentified
  8. 2019 Low

    Pharmacological work in retinal pigment epithelial cells extended CACNB2-containing channels to VEGF secretion, implicating them in proliferative diabetic retinopathy.

    Evidence Pharmacological LTCC blockade and VEGF measurement in ARPE19 cells

    PMID:31439644

    Open questions at the time
    • CACNB2-specific role not isolated from general LTCC activity
    • Single cell line, no loss-of-function for CACNB2 itself
  9. 2022 High

    Patient-derived hiPSC-CM models with isogenic CRISPR correction established CACNB2 missense variants (S142F, S480L) as causative loss-of-function alleles in Brugada and short QT syndromes, and identified promoter hypermethylation as an additional silencing mechanism.

    Evidence hiPSC-CM generation, CRISPR/Cas9 isogenic correction, patch-clamp, bisulfite sequencing, and demethylase rescue

    PMID:35894107 PMID:35955449

    Open questions at the time
    • Trigger for promoter hypermethylation and DNMT upregulation unknown
    • Generalizability across patient backgrounds not established
  10. 2022 High

    Neuronal studies generalized miR-499-5p repression of CACNB2 beyond heart, showing it reduces CaV1.2 surface expression and impairs dendritogenesis and memory in a Cacna1c-dependent manner.

    Evidence miRNA overexpression in rat hippocampal neurons in vitro and in vivo with genetic epistasis against Cacna1c haploinsufficiency and behavioral testing

    PMID:35969184

    Open questions at the time
    • Direct biochemical mechanism linking CACNB2 loss to dendritic deficits not resolved
    • Whether scaffolding versus channel role drives the neuronal phenotype unclear
  11. 2026 Medium

    An atrial fibrillation rat model defined a fibrosis-protective role, with CACNB2 overexpression attenuating Ang II profibrotic signaling through modulation of the TGF-β/Smad pathway.

    Evidence In vivo rat AF overexpression model plus primary atrial fibroblast/cardiomyocyte assays with TGF-β/Smad western blotting

    PMID:41748049

    Open questions at the time
    • Link to TGF-β/Smad is correlative without direct pathway reconstitution
    • Whether the antifibrotic effect requires channel activity not tested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How CACNB2's channel-dependent and channel-independent (RAS-MAPK, TGF-β/Smad, scaffolding) functions are molecularly partitioned and co-regulated remains unresolved.
  • No direct physical partner identified for the RAS-MAPK or TGF-β/Smad effects
  • Structural basis distinguishing channel modulation from scaffolding not established
  • Tissue-specific balance of the multiple functions not mapped

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2 GO:0098772 molecular function regulator activity 2
Localization
GO:0005886 plasma membrane 3
Partners
Complex memberships
L-type voltage-gated calcium channel (CaV1.2)

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 Conditional cardiomyocyte-specific excision of the cacnb2 gene in adult mice reduced CaVβ2 protein expression by >96% in isolated cardiac myocytes and reduced L-type calcium current density by <29% at 0 mV, with a slight (non-significant) depolarizing shift in voltage for half-maximal activation, without compensation by other CaVβ proteins or changes in CaV1.2 protein levels. This contrasts with embryonic cardiomyocytes where cacnb2 deletion reduces L-type calcium currents by up to 75% and is lethal. Conditional knockout (Cre-lox), patch-clamp electrophysiology, western blotting, immunofluorescence in adult mouse cardiomyocytes The Journal of biological chemistry High 21357697
2012 Depletion of β2.1 (CACNB2) in zebrafish using morpholinos caused compromised cardiac function, reduced ventricular cell proliferation, failure of outer curvature cells to elongate during chamber ballooning, and failure of cardiomyocytes to accumulate N-cadherin at the membrane with dissociation under stress. Pharmacological depression of L-type calcium channels (LTCC) mimicked these contractility defects, and LTCC stimulation rescued them, indicating β2.1 phenotypes are at least partly LTCC-dependent. β2.1 also functions as a MAGUK scaffolding protein to maintain N-cadherin-based adherens junctions. Morpholino knockdown in zebrafish, pharmacological LTCC modulation, morphological/histological analysis, immunostaining for N-cadherin Developmental dynamics : an official publication of the American Association of Anatomists High 22274990
2008 Zebrafish CACNB2 (β2.1 and β2.2) are membrane-associated guanylate kinase (MAGUK)-family proteins with conserved SH3 and guanylate kinase domains. The genes undergo alternative splicing at the N-terminus and within the internal HOOK domain, and splicing is temporally and spatially regulated with distinct transcript variant subsets in embryonic versus adult heart. cDNA cloning, sequence analysis, RT-PCR, comparative genomics of teleost and human loci BMC molecular biology Medium 18419826
2014 Three rare missense mutations in CACNB2 (G167S, S197F, F240L) found in ASD-affected families alter whole-cell Ba2+ currents through calcium channels in HEK-293 cells. G167S and S197F displayed significantly decelerated time-dependent inactivation and increased sensitivity of voltage-dependent inactivation, while F240L showed significantly accelerated time-dependent inactivation. Recombinant expression in HEK-293 cells, whole-cell patch-clamp electrophysiology, site-directed mutagenesis PloS one High 24752249
2017 miR-499 directly targets the 3' UTR of CACNB2, as confirmed by luciferase reporter assay and Argonaute pull-down of CACNB2 mRNA in miR-499 mimic-transfected HL-1 cells. miR-499 mimic transfection downregulated CACNB2 protein expression, while miR-499 inhibitor upregulated it. Downregulation of CACNB2 also led to downregulation of the pore-forming α-subunit (CACNA1C) protein levels. Luciferase reporter assay, Argonaute pull-down, miRNA mimic/inhibitor transfection, western blotting in HL-1 cardiomyocytes BBA clinical High 28239561
2022 miR-499-5p directly targets CACNB2 in rat hippocampal neurons, reducing surface expression and activity of the L-type calcium channel Cav1.2, impairing dendritogenesis. miR-499-5p overexpression in the hippocampus in vivo induced short-term memory impairments selectively in rats haploinsufficient for Cacna1c (the Cav1.2 pore-forming subunit), establishing a CACNB2-Cav1.2 functional epistatic interaction. miRNA overexpression in rat hippocampal neurons (in vitro and in vivo), surface expression assays, calcium channel activity recordings, behavioral testing, genetic epistasis with Cacna1c haploinsufficient rats EMBO reports High 35969184
2022 In hiPSC-CMs from an SQT5 patient carrying the CACNB2 S480L variant, decreased L-type Ca2+ current and shortened action potential duration were associated with increased DNA methylation of CpG islands in the CACNB2 promoter and upregulated DNA methyltransferases. Overexpression of a demethylation enzyme rescued decreased CACNB2 expression and L-type Ca2+ current, establishing promoter hypermethylation as an epigenetic mechanism of CACNB2 loss-of-function. hiPSC-CM generation, CRISPR/Cas9 isogenic correction, patch-clamp electrophysiology, western blotting, dot blotting, bisulfite sequencing, demethylase overexpression rescue Europace High 35894107
2022 The CACNB2 variant S142F causes loss-of-function of L-type calcium channels in hiPSC-CMs from a Brugada syndrome patient: reduced ICa-L, shifted inactivation curve to more positive potential, accelerated recovery from inactivation, and decreased CACNB2 protein expression. CRISPR/Cas9 correction of the variant rescued all these changes to normal. hiPSC-CM generation, CRISPR/Cas9 isogenic correction, patch-clamp electrophysiology, western blotting, arrhythmia event monitoring International journal of molecular sciences High 35955449
2019 CACNB2 overexpression in HEK293 cells triggers cell proliferation via upregulation of the RAS-MAPK pathway. This effect was independent of LTCC activity, as nifedipine (LTCC blocker) failed to inhibit RAS-MAPK pathway gene expression or affect apoptosis markers in CACNB2-overexpressing cells. In hypertensive Dahl Salt-Sensitive rat kidneys on high-salt diet, CACNB2 expression and RAS-MAPK mRNA levels were both elevated. HEK293 overexpression, cell proliferation assay, gene expression analysis, pharmacological LTCC blockade (nifedipine), in vivo rat model gene expression Biochemical and biophysical research communications Medium 30992131
2019 L-type calcium channels (containing CACNB2 as β2 subunit) regulate VEGF expression and secretion from retinal pigment epithelial cells (ARPE19), supporting a role for CACNB2 in regulation of VEGF in proliferative diabetic retinopathy pathogenesis. Pharmacological L-type calcium channel blockade in ARPE19 cells, VEGF expression and secretion measurement Diabetes Low 31439644
2013 The rs7069292 SNP in the 5' regulatory region of CACNB2 affects promoter activity: the C allele showed significantly increased promoter activity compared to the T allele in luciferase reporter assays, indicating that a T>C mutation in the regulatory region can modulate CACNB2 expression. Luciferase reporter gene assay with CACNB2 promoter fragment containing rs7069292 Zhonghua yi xue yi chuan xue za zhi Medium 23744328
2026 CACNB2 overexpression in a rat AF model improved electrophysiological parameters, reduced atrial fibrosis and inflammation, and attenuated profibrotic effects of Ang II on primary atrial fibroblasts. In primary atrial cardiomyocytes, CACNB2 overexpression modulated calcium handling and oxidative stress. The protective effect was accompanied by modulation of the TGF-β/Smad pathway, indicating CACNB2 directly regulates this fibrotic signaling axis. In vivo rat AF model with CACNB2 overexpression, electrophysiological measurements, histology, fibrotic marker expression (α-SMA, collagen I/III), primary atrial fibroblast culture with Ang II stimulation, western blotting for TGF-β/Smad pathway Cellular signalling Medium 41748049

Source papers

Stage 0 corpus · 25 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Genetic variations in CYP17A1, CACNB2 and PLEKHA7 are associated with blood pressure and/or hypertension in She ethnic minority of China. Atherosclerosis 56 21963141
2011 Moderate calcium channel dysfunction in adult mice with inducible cardiomyocyte-specific excision of the cacnb2 gene. The Journal of biological chemistry 46 21357697
2014 Integrated pathway-based approach identifies association between genomic regions at CTCF and CACNB2 and schizophrenia. PLoS genetics 45 24901509
2014 Rare mutations of CACNB2 found in autism spectrum disease-affected families alter calcium channel function. PloS one 39 24752249
2015 CACNB2: An Emerging Pharmacological Target for Hypertension, Heart Failure, Arrhythmia and Mental Disorders. Current molecular pharmacology 35 25966706
2017 Regulation of cardiac CACNB2 by microRNA-499: Potential role in atrial fibrillation. BBA clinical 34 28239561
2012 Voltage-gated calcium channel CACNB2 (β2.1) protein is required in the heart for control of cell proliferation and heart tube integrity. Developmental dynamics : an official publication of the American Association of Anatomists 30 22274990
2022 Bipolar-associated miR-499-5p controls neuroplasticity by downregulating the Cav1.2 subunit CACNB2. EMBO reports 20 35969184
2019 Variation in the CACNB2 gene is associated with functional connectivity of the Hippocampus in bipolar disorder. BMC psychiatry 18 30744588
2019 CACNB2 Is a Novel Susceptibility Gene for Diabetic Retinopathy in Type 1 Diabetes. Diabetes 17 31439644
2022 Epigenetic mechanism of L-type calcium channel β-subunit downregulation in short QT human induced pluripotent stem cell-derived cardiomyocytes with CACNB2 mutation. Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology 11 35894107
2022 A Preclinical Study on Brugada Syndrome with a CACNB2 Variant Using Human Cardiomyocytes from Induced Pluripotent Stem Cells. International journal of molecular sciences 11 35955449
2008 The calcium channel beta2 (CACNB2) subunit repertoire in teleosts. BMC molecular biology 11 18419826
2020 CACNB2 rs11013860 polymorphism correlates of prefrontal cortex thickness in bipolar patients with first-episode mania. Journal of affective disorders 8 32158010
1999 The Mycobacterium tuberculosis mysB gene product is a functional equivalent of the Escherichia coli sigma factor, KatF. Gene 7 10580156
2019 CACNB2 is associated with aberrant RAS-MAPK signaling in hypertensive Dahl Salt-Sensitive rats. Biochemical and biophysical research communications 6 30992131
2018 Association between ATP2B1 and CACNB2 polymorphisms and high blood pressure in a population of Lithuanian children and adolescents: a cross-sectional study. BMJ open 5 29982197
2018 Bifid T waves on the ECG and genetic variation in calcium channel voltage-dependent beta 2 subunit gene (CACNB2) in acute Kawasaki disease. Congenital heart disease 3 30395415
2023 Sudden cardiac arrest in a patient with malignant mitral valve prolapse with CACNB2 gene mutation: a simple coincidence or coexistence?-a case report. European heart journal. Case reports 2 37123658
2022 A Post-GWAS Functional Analysis Confirming Effects of Three BTA13 Genes CACNB2, SLC39A12, and ZEB1 on Dairy Cattle Reproduction. Frontiers in genetics 1 35754833
2026 CACNB2 overexpression suppresses atrial fibroblast activation and atrial fibrosis to mitigate atrial fibrillation. Cellular signalling 0 41748049
2025 Genetic evidence for amlodipine's protective role in gastroesophageal reflux disease: A focus on CACNB2. PloS one 0 39965006
2025 The impact of the CACNB2 Rs11013860 polymorphism on grey matter volume and brain function in bipolar disorder. BMC psychiatry 0 40016690
2021 Association study of hypertension susceptibility genes ITGA9, MOV10, and CACNB2 with preeclampsia in Chinese Han population. The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 0 33491517
2013 [Association between CACNB2 gene polymorphisms and essential hypertension]. Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics 0 23744328

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