Affinage

CACNB2

Voltage-dependent L-type calcium channel subunit beta-2 · UniProt Q08289

Length
660 aa
Mass
73.6 kDa
Annotated
2026-04-28
25 papers in source corpus 12 papers cited in narrative 12 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CACNB2 encodes Cavβ2, an auxiliary β-subunit of voltage-gated calcium channels that functions as both an essential regulator of L-type calcium channel trafficking and gating, and a MAGUK-family scaffolding protein with channel-independent roles. Cavβ2 chaperones the CaV1.2 pore-forming α1C subunit to the plasma membrane and modulates channel activation voltage, inactivation kinetics, and recovery from inactivation, with loss-of-function mutations causing Brugada syndrome and short QT syndrome through reduced L-type calcium current (PMID:35955449, PMID:35894107, PMID:21357697). Beyond its channel function, Cavβ2 maintains N-cadherin–based adherens junctions in cardiomyocytes through its SH3 and guanylate kinase MAGUK domains, and its loss disrupts cardiac morphogenesis in zebrafish (PMID:22274990, PMID:18419826). CACNB2 expression is post-transcriptionally repressed by miR-499-5p, which directly targets its 3′ UTR to reduce CaV1.2 surface expression in both cardiomyocytes and hippocampal neurons, where this pathway regulates dendritogenesis and memory (PMID:28239561, PMID:35969184).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2008 Medium

    Establishing that Cavβ2 subunits belong to the MAGUK protein family with conserved SH3 and guanylate kinase domains, and undergo developmentally regulated alternative splicing, provided the structural basis for understanding both channel-dependent and channel-independent functions.

    Evidence cDNA cloning, RT-PCR, and comparative genomic analysis of zebrafish Cavβ2 splice variants

    PMID:18419826

    Open questions at the time
    • Domain-deletion studies mapping which domains mediate channel-independent scaffolding were not performed
    • Functional consequences of individual splice variants were not tested electrophysiologically
  2. 2011 High

    Resolving why embryonic Cavβ2 loss is lethal while adult cardiomyocytes tolerate >96% Cavβ2 depletion with only modest (~29%) L-type current reduction demonstrated that Cavβ2's role as the dominant β-subunit regulating CaV1.2 current is developmentally stage-dependent.

    Evidence Conditional cardiomyocyte-specific knockout in adult mice with patch clamp and western blot

    PMID:21357697

    Open questions at the time
    • Mechanism of residual L-type current in adult cardiomyocytes lacking Cavβ2 is unknown
    • Whether other β-subunits compensate functionally without changing protein levels was not resolved
  3. 2012 Medium

    Demonstrating that Cavβ2 depletion impairs both cardiac contractility (rescued by L-type channel agonism) and N-cadherin membrane accumulation (not rescued by channel modulation) established a dual function: channel-dependent excitation-contraction coupling and channel-independent MAGUK-mediated cell adhesion.

    Evidence Morpholino knockdown in zebrafish with pharmacological epistasis and N-cadherin immunofluorescence

    PMID:22274990

    Open questions at the time
    • Morpholino off-target effects not excluded by genetic mutant
    • Direct physical interaction between Cavβ2 and N-cadherin was not demonstrated biochemically
  4. 2014 High

    Showing that ASD-associated CACNB2 missense mutations differentially accelerate or decelerate channel inactivation kinetics established that Cavβ2 is a tunable modulator of CaV1.2 gating, not merely an on/off trafficking switch.

    Evidence Whole-cell patch clamp of mutant β2 subunits co-expressed with α1C in HEK-293 cells

    PMID:24752249

    Open questions at the time
    • Neuronal consequences of these mutations were not tested
    • Whether altered kinetics translate to altered calcium signaling in cardiomyocytes or neurons in vivo is unknown
  5. 2017 High

    Identifying miR-499 as a direct post-transcriptional repressor of CACNB2 that secondarily reduces CACNA1C protein revealed a miRNA-mediated mechanism for coordinated downregulation of the calcium channel complex.

    Evidence Luciferase reporter assay and Argonaute pulldown in HL-1 atrial cardiomyocytes

    PMID:28239561

    Open questions at the time
    • In vivo cardiac phenotype of miR-499-mediated CACNB2 suppression was not assessed
    • Whether miR-499 regulates other β-subunit family members was not tested
  6. 2022 High

    Three parallel studies established disease-causal mechanisms for CACNB2 variants: a Brugada syndrome S142F variant causes L-type current loss-of-function (rescued by CRISPR correction), an SQT5 S480L variant downregulates CACNB2 via promoter hypermethylation (rescued by demethylase overexpression), and miR-499-5p targeting of CACNB2 in hippocampal neurons impairs dendritogenesis and memory in a Cacna1c-dependent epistatic manner.

    Evidence hiPSC-CM electrophysiology with isogenic CRISPR correction, bisulfite sequencing with demethylase rescue, and in vivo hippocampal miR-499-5p injection with behavioral testing in Cacna1c haploinsufficient rats

    PMID:35894107 PMID:35955449 PMID:35969184

    Open questions at the time
    • Structural basis for how S142F and S480L mutations alter β2-α1C interaction is unknown
    • Whether promoter hypermethylation is a general mechanism for CACNB2 silencing beyond SQT5 is untested
    • Whether miR-499-5p-CACNB2 axis operates in human neurons is unconfirmed
  7. 2026 Medium

    Demonstrating that CACNB2 overexpression attenuates atrial fibrosis and suppresses TGF-β/Smad signaling in an atrial fibrillation model extended Cavβ2's role beyond channel gating to anti-fibrotic signaling in atrial tissue.

    Evidence In vivo rat AF model and primary atrial fibroblast culture with CACNB2 overexpression, western blot for TGF-β/Smad pathway

    PMID:41748049

    Open questions at the time
    • Gain-of-function only; loss-of-function confirmation needed
    • Whether anti-fibrotic effect is channel-dependent or channel-independent was not resolved
    • No domain mapping for TGF-β/Smad suppression

Open questions

Synthesis pass · forward-looking unresolved questions
  • The structural basis of Cavβ2's dual function — how the same protein switches between channel auxiliary subunit and MAGUK scaffolding roles — remains unresolved, as does the in vivo relevance of its channel-independent RAS-MAPK signaling and anti-fibrotic activities.
  • No high-resolution structure of Cavβ2 in complex with N-cadherin or other junctional partners
  • Channel-independent signaling (RAS-MAPK, TGF-β/Smad) lacks loss-of-function and domain-mapping validation
  • Relative contribution of individual splice variants to cardiac versus neuronal functions is unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 4 GO:0005198 structural molecule activity 2 GO:0060090 molecular adaptor activity 2
Localization
GO:0005886 plasma membrane 4
Pathway
R-HSA-382551 Transport of small molecules 4 R-HSA-1266738 Developmental Biology 2 R-HSA-112316 Neuronal System 1 R-HSA-162582 Signal Transduction 1
Partners
Complex memberships
L-type voltage-gated calcium channel (CaV1.2 complex)

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 Conditional cardiomyocyte-specific excision of cacnb2 in adult mice reduced CaVβ2 protein expression by >96% in isolated cardiac myocytes and >74% in heart protein fractions, resulting in <29% reduction in L-type calcium current density and a slight depolarizing shift in half-maximal activation voltage, without compensation by other CaVβ proteins or changes in CaV1.2 protein levels. This contrasts with embryonic cardiomyocytes where CaVβ2 loss reduces L-type calcium current by up to 75% and is lethal. Conditional knockout (Cre-lox), patch clamp electrophysiology, western blot, protein fractionation The Journal of biological chemistry High 21357697
2014 Three rare missense mutations of CACNB2 (G167S, S197F, F240L) found in ASD-affected families alter L-type calcium channel kinetics when expressed in HEK-293 cells: G167S and S197F displayed significantly decelerated time-dependent inactivation and increased sensitivity of voltage-dependent inactivation, while F240L showed significantly accelerated time-dependent inactivation, demonstrating that CaVβ2 modulates calcium channel inactivation kinetics. Whole-cell patch clamp (Ba2+ currents) in HEK-293 recombinant expression system with mutant subunits PloS one High 24752249
2012 Morpholino-mediated depletion of β2.1 in zebrafish caused compromised cardiac contractility (rescued by L-type calcium channel stimulation), reduced ventricular cell proliferation, failure to accumulate N-cadherin at the cardiomyocyte membrane, and dissociation of cardiomyocytes under stress, indicating CaVβ2 functions both in L-type calcium channel-dependent contractility and as a MAGUK scaffolding protein maintaining N-cadherin-based adherens junctions. Morpholino knockdown in zebrafish, pharmacological rescue (LTCC agonist/antagonist), immunofluorescence for N-cadherin localization, morphological analysis of heart development Developmental dynamics Medium 22274990
2017 miR-499 directly targets the 3' UTR of CACNB2, as confirmed by luciferase reporter assay and Argonaute pulldown of CACNB2 mRNA after miR-499 mimic transfection. Downregulation of CACNB2 by miR-499 in HL-1 atrial cardiomyocytes leads to secondary downregulation of the pore-forming α-subunit CACNA1C protein. Luciferase reporter assay, Argonaute pulldown (RISC immunoprecipitation), miRNA mimic/inhibitor transfection, western blot BBA clinical High 28239561
2022 miR-499-5p directly targets CACNB2 in rat hippocampal neurons, reducing surface expression and activity of the L-type calcium channel CaV1.2, and impairing dendritogenesis. In vivo overexpression of miR-499-5p in the hippocampus induced short-term memory impairments selectively in rats haploinsufficient for Cacna1c, placing CACNB2 downstream of miR-499-5p in a pathway regulating neuroplasticity. Luciferase reporter assay, live-cell surface expression imaging, patch clamp, morpholino/miRNA overexpression in primary neurons, in vivo hippocampal injection, behavioral testing, genetic epistasis (Cacna1c haploinsufficient rats) EMBO reports High 35969184
2022 A CACNB2 variant (c.425C>T/p.S142F) in a Brugada syndrome patient causes loss-of-function of L-type calcium channels in hiPSC-CMs, with reduced ICa-L, shifted inactivation curve to more positive potential, accelerated recovery from inactivation, and decreased CACNB2 protein expression. CRISPR/Cas9 correction of the variant rescued all these changes to normal, confirming pathogenicity of the variant. hiPSC-CM generation, patch clamp electrophysiology, western blot, CRISPR/Cas9 isogenic correction International journal of molecular sciences High 35955449
2022 In SQT5 hiPSC-CMs carrying the CACNB2-S480L variant, reduced L-type Ca2+ current and shortened action potential duration result from decreased CACNB2 protein expression caused by enhanced DNA methylation of CpG islands in the CACNB2 promoter region. Overexpression of a demethylation enzyme rescued CACNB2 expression and L-type Ca2+ current, identifying promoter hypermethylation as the epigenetic mechanism of CACNB2 downregulation. hiPSC-CM model, patch clamp, western blot, dot blotting, bisulfite sequencing, CRISPR/Cas9 isogenic correction, demethylase overexpression rescue Europace High 35894107
2019 CACNB2 overexpression in HEK293 cells triggers cell proliferation via upregulation of the RAS-MAPK pathway, and this effect is independent of L-type calcium channel activity since nifedipine (LTCC blocker) failed to inhibit RAS-MAPK pathway gene expression or apoptosis markers in CACNB2-overexpressing cells. Transient overexpression in HEK293, gene expression analysis, pharmacological inhibition with nifedipine, proliferation assay Biochemical and biophysical research communications Low 30992131
2019 L-type calcium channels (containing CaVβ2/CACNB2) regulate VEGF expression and secretion from retinal pigment epithelial cells (ARPE19), placing CACNB2 upstream of VEGF in retinal cell biology. Cell-based VEGF secretion assay in ARPE19 cells with calcium channel manipulation Diabetes Low 31439644
2026 CACNB2 overexpression in a rat atrial fibrillation model improved electrophysiological parameters and reduced atrial fibrosis; in vitro, CACNB2 overexpression in primary atrial fibroblasts attenuated Ang II-induced profibrotic effects (reduced α-SMA, collagen I, collagen III), modulated calcium handling and oxidative stress in atrial cardiomyocytes, and suppressed the TGF-β/Smad signaling pathway. In vivo rat AF model with CACNB2 overexpression, primary atrial fibroblast culture, western blot for fibrotic markers and TGF-β/Smad pathway components, electrophysiology (AERP measurement), calcium handling assay Cellular signalling Medium 41748049
2008 Zebrafish CaVβ2 (β2.1 and β2.2) subunits are membrane-associated guanylate kinase (MAGUK)-family proteins with conserved SH3 and guanylate kinase domains, and undergo alternative splicing at the N-terminus and internal HOOK domain. A different subset of β2 splice variants is expressed in embryonic versus adult heart, suggesting developmental regulation of channel composition. cDNA cloning, RT-PCR, comparative genomic analysis, domain analysis BMC molecular biology Medium 18419826
2013 The rs7069292 T>C SNP in the 5' regulatory region of CACNB2 affects promoter activity: allele C showed significantly increased promoter activity compared to allele T in luciferase reporter assay, suggesting a regulatory role for this variant in controlling CACNB2 expression. Luciferase reporter gene assay with promoter fragment containing rs7069292 Chinese journal of medical genetics Low 23744328

Source papers

Stage 0 corpus · 25 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Genetic variations in CYP17A1, CACNB2 and PLEKHA7 are associated with blood pressure and/or hypertension in She ethnic minority of China. Atherosclerosis 56 21963141
2011 Moderate calcium channel dysfunction in adult mice with inducible cardiomyocyte-specific excision of the cacnb2 gene. The Journal of biological chemistry 46 21357697
2014 Integrated pathway-based approach identifies association between genomic regions at CTCF and CACNB2 and schizophrenia. PLoS genetics 45 24901509
2014 Rare mutations of CACNB2 found in autism spectrum disease-affected families alter calcium channel function. PloS one 38 24752249
2015 CACNB2: An Emerging Pharmacological Target for Hypertension, Heart Failure, Arrhythmia and Mental Disorders. Current molecular pharmacology 35 25966706
2017 Regulation of cardiac CACNB2 by microRNA-499: Potential role in atrial fibrillation. BBA clinical 33 28239561
2012 Voltage-gated calcium channel CACNB2 (β2.1) protein is required in the heart for control of cell proliferation and heart tube integrity. Developmental dynamics : an official publication of the American Association of Anatomists 30 22274990
2022 Bipolar-associated miR-499-5p controls neuroplasticity by downregulating the Cav1.2 subunit CACNB2. EMBO reports 19 35969184
2019 Variation in the CACNB2 gene is associated with functional connectivity of the Hippocampus in bipolar disorder. BMC psychiatry 18 30744588
2019 CACNB2 Is a Novel Susceptibility Gene for Diabetic Retinopathy in Type 1 Diabetes. Diabetes 17 31439644
2022 Epigenetic mechanism of L-type calcium channel β-subunit downregulation in short QT human induced pluripotent stem cell-derived cardiomyocytes with CACNB2 mutation. Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology 11 35894107
2022 A Preclinical Study on Brugada Syndrome with a CACNB2 Variant Using Human Cardiomyocytes from Induced Pluripotent Stem Cells. International journal of molecular sciences 11 35955449
2008 The calcium channel beta2 (CACNB2) subunit repertoire in teleosts. BMC molecular biology 11 18419826
2020 CACNB2 rs11013860 polymorphism correlates of prefrontal cortex thickness in bipolar patients with first-episode mania. Journal of affective disorders 8 32158010
1999 The Mycobacterium tuberculosis mysB gene product is a functional equivalent of the Escherichia coli sigma factor, KatF. Gene 7 10580156
2019 CACNB2 is associated with aberrant RAS-MAPK signaling in hypertensive Dahl Salt-Sensitive rats. Biochemical and biophysical research communications 5 30992131
2018 Association between ATP2B1 and CACNB2 polymorphisms and high blood pressure in a population of Lithuanian children and adolescents: a cross-sectional study. BMJ open 5 29982197
2018 Bifid T waves on the ECG and genetic variation in calcium channel voltage-dependent beta 2 subunit gene (CACNB2) in acute Kawasaki disease. Congenital heart disease 3 30395415
2023 Sudden cardiac arrest in a patient with malignant mitral valve prolapse with CACNB2 gene mutation: a simple coincidence or coexistence?-a case report. European heart journal. Case reports 2 37123658
2022 A Post-GWAS Functional Analysis Confirming Effects of Three BTA13 Genes CACNB2, SLC39A12, and ZEB1 on Dairy Cattle Reproduction. Frontiers in genetics 1 35754833
2026 CACNB2 overexpression suppresses atrial fibroblast activation and atrial fibrosis to mitigate atrial fibrillation. Cellular signalling 0 41748049
2025 Genetic evidence for amlodipine's protective role in gastroesophageal reflux disease: A focus on CACNB2. PloS one 0 39965006
2025 The impact of the CACNB2 Rs11013860 polymorphism on grey matter volume and brain function in bipolar disorder. BMC psychiatry 0 40016690
2021 Association study of hypertension susceptibility genes ITGA9, MOV10, and CACNB2 with preeclampsia in Chinese Han population. The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 0 33491517
2013 [Association between CACNB2 gene polymorphisms and essential hypertension]. Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics 0 23744328