Affinage

C17ORF75

Protein Njmu-R1 · UniProt Q9HAS0

Length
396 aa
Mass
44.6 kDa
Annotated
2026-06-11
7 papers in source corpus 2 papers cited in narrative 2 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 1/1 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

C17orf75 is a poorly characterized protein known primarily through its dependence on upstream regulatory inputs rather than any autonomous activity. Its expression requires functional minor spliceosome activity: loss of the U12 intron-splicing factor SCNM1 severely reduces C17orf75 expression, which is restored upon SCNM1 re-introduction, indicating that C17orf75 transcript maturation depends on minor spliceosome–mediated splicing (PMID:36084634). No direct enzymatic activity, binding partners, substrates, or cellular function have been established for C17orf75 itself in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2022 Medium

    Established that C17orf75 expression is governed by the minor spliceosome, identifying it as a downstream-regulated gene rather than characterizing its own function.

    Evidence CRISPR-Cas9 knockout and siRNA knockdown of SCNM1 with retroviral rescue and comparative transcriptome analysis in human fibroblasts and RPE-1 cells

    PMID:36084634

    Open questions at the time
    • C17orf75 is one of several SCNM1-affected genes; its direct function was not characterized
    • no protein-level mechanism, partners, or activity defined for C17orf75
    • whether reduced C17orf75 contributes to any SCNM1-loss phenotype is unknown
  2. 2022 Low

    Placed C17orf75 protein downstream of the metal cation transporter ZIP8 in a proteomic dependency, hinting at a connection to metal-transport-linked cellular state.

    Evidence CRISPR/Cas9 ZIP8 knockout with iTRAQ-based quantitative proteomics in human cells

    PMID:36330220

    Open questions at the time
    • single proteomics screen from one lab with no functional follow-up on C17orf75
    • mechanism linking ZIP8 to C17orf75 abundance unknown
    • direct versus indirect regulation not distinguished

Open questions

Synthesis pass · forward-looking unresolved questions
  • The autonomous molecular function of C17orf75 — its biochemical activity, localization, and physical partners — remains entirely undefined.
  • no enzymatic or binding activity established
  • no subcellular localization determined
  • no interaction partners or complex membership identified

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
No controlled-vocabulary terms were assigned to this entry.

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2022 C17orf75 expression is regulated by the minor spliceosome component SCNM1 through U12 intron splicing; loss of SCNM1 (knockout or knockdown) severely reduces C17orf75 expression, and re-introduction of SCNM1 restores it. CRISPR-Cas9 knockout of SCNM1, siRNA knockdown, comparative transcriptome analysis, retroviral rescue in human fibroblasts and RPE-1 cells American journal of human genetics Medium 36084634
2022 C17orf75 protein is downregulated in ZIP8-knockout human cells, placing it downstream of the metal cation transporter ZIP8 in a proteomic dependency relationship. CRISPR/Cas9 ZIP8 knockout, iTRAQ-based quantitative proteomics in human cells Frontiers in molecular biosciences Low 36330220

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1999 CD36, a novel receptor for oxidized low-density lipoproteins, is highly expressed on lipid-laden macrophages in human atherosclerotic aorta. Arteriosclerosis, thrombosis, and vascular biology 147 10323787
2023 Reconstruction of Solid Electrolyte Interphase with SrI2 Reactivates Dead Li for Durable Anode-Free Li-Metal Batteries. Angewandte Chemie (International ed. in English) 22 37011095
2021 A novel immunodiagnosis panel for hepatocellular carcinoma based on bioinformatics and the autoantibody-antigen system. Cancer science 22 34821436
2022 Mutations in SCNM1 cause orofaciodigital syndrome due to minor intron splicing defects affecting primary cilia. American journal of human genetics 14 36084634
2013 Calcium phosphate cements with strontium halides as radiopacifiers. Journal of biomedical materials research. Part B, Applied biomaterials 10 23997030
2022 Single-gene knockout-coupled omics analysis identifies C9orf85 and CXorf38 as two uncharacterized human proteins associated with ZIP8 malfunction. Frontiers in molecular biosciences 4 36330220
2019 Developing new SrI2 and β-D-fructopyranose-based metal-organic frameworks with nonlinear optical properties. Acta crystallographica Section B, Structural science, crystal engineering and materials 2 32830746

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