Affinage

ATRN

Attractin · UniProt O75882

Length
1429 aa
Mass
158.5 kDa
Annotated
2026-06-09
27 papers in source corpus 8 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/5 claims corpus-supported (80%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ATRN (Attractin) is a multidomain glycoprotein produced as functionally distinct secreted and membrane-bound isoforms whose roles span immune cell interaction, CNS myelination, and receptor regulation (PMID:10811918, PMID:11444801). The two isoforms arise by alternative splicing: a soluble form terminating at a LINE-1 retrotransposon-derived exon, and a membrane form that splices over this exon to add transmembrane and cytoplasmic domains (PMID:10811918); activated leukocytes first display the membrane isoform on the surface and then release the soluble form (PMID:10811918). The secreted protein, a 175 kDa serum glycoprotein with DPPIV enzymatic activity, is released by activated T lymphocytes and drives monocyte spreading, T cell clustering, and co-stimulation of T-cell antigen responses (PMID:9736737, PMID:8596018). The membrane isoform acts as a transmembrane adapter, recruiting the E3 ubiquitin ligase MGRN1 through MGRN1's RING domain to the melanocortin receptors MC1R and MC4R, enabling their ubiquitination and degradation [PMID:bio_10.1101_2025.03.25.645338]. Loss-of-function mutations establish ATRN as essential for CNS integrity: mouse mutants develop spongiform vacuolization across the brain and spinal cord (PMID:11444801), and a homozygous human splice-site mutation causes hypomyelinating leukodystrophy (PMID:28493104). In zebrafish embryos, Atrn binds the demethylase Alkbh4 and is required for actomyosin contractile ring formation during epiboly (PMID:28924386), and transmembrane ATRN additionally serves as a shared cell-surface entry receptor for a modular family of bacterial exotoxins [PMID:bio_10.1101_2025.10.08.681221].

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 1996 Medium

    Established that the serum 175-kDa DPPT-L species is distinct from CD26/DPPIV yet retains DPPIV enzymatic activity and co-stimulates T-cell responses, defining an immune-modulatory secreted protein.

    Evidence Biochemical characterization, enzymatic assay, and T-cell co-stimulation assay with recall antigen

    PMID:8596018

    Open questions at the time
    • Catalytic mechanism and physiological substrates of the DPPIV activity not defined
    • Receptor/ligand mediating co-stimulation not identified
  2. 1998 Medium

    Cloning identified ATRN as a T-cell-secreted glycoprotein that mediates monocyte spreading and T cell clustering, and sequence analysis defined its multidomain architecture (protease serine, EGF, CUB, C-type lectin, gamma-chain-like motifs).

    Evidence Protein/cDNA cloning with cell adhesion/clustering functional assays and sequence-based domain mapping

    PMID:9736737

    Open questions at the time
    • Binding partners mediating clustering not identified
    • Functional contributions of individual domains untested
  3. 2000 High

    Resolved how a single gene yields opposing forms by showing alternative splicing—gated by a LINE-1-derived exon—produces secreted versus membrane isoforms, with surface membrane ATRN preceding soluble release upon leukocyte activation.

    Evidence Genomic exon mapping, RT-PCR isoform quantification, and secretion assay on PHA-activated leukocytes

    PMID:10811918

    Open questions at the time
    • Mechanism cleaving/releasing the soluble form from membrane ATRN not defined
    • Regulation of the splicing switch unknown
  4. 2001 High

    Demonstrated that ATRN is required for CNS integrity independent of its coat-color role, since loss-of-function mouse alleles produce spongiform neurodegeneration.

    Evidence Allelism tests, Northern/Southern blot, and histopathology of three independent mouse Atrn mutant alleles

    PMID:11444801

    Open questions at the time
    • Molecular pathway linking ATRN loss to vacuolization not established
    • Cell type responsible not pinpointed
  5. 2017 Medium

    Confirmed in humans that ATRN loss-of-function causes hypomyelinating leukodystrophy, translating the mouse CNS phenotype to human disease.

    Evidence Whole exome sequencing and patient cDNA analysis of an aberrant splice product (c.3068+5G>A)

    PMID:28493104

    Open questions at the time
    • Single family limits genotype-phenotype generalization
    • Mechanistic role of ATRN in myelin formation not defined
  6. 2017 Medium

    Identified a morphogenetic role by showing Atrn binds the demethylase Alkbh4 and is required for actomyosin contractile ring formation during embryonic epiboly.

    Evidence Zebrafish CRISPR maternal mutants and morpholino knockdown, actin/NMII immunofluorescence, and yeast two-hybrid interaction with preference for active Alkbh4

    PMID:28924386

    Open questions at the time
    • Whether the Atrn-Alkbh4 axis operates in mammals or CNS unknown
    • Direct biochemical demethylation mechanism not reconstituted
  7. 2025 Medium

    Defined a mechanistic role for membrane ATRN as an adapter that recruits the E3 ligase MGRN1 to drive ubiquitination and degradation of melanocortin receptors MC1R and MC4R, controlling receptor surface levels.

    Evidence Co-IP of ATRN-MGRN1 (RING domain), receptor ubiquitination/degradation assays, and surface/ciliary receptor imaging (preprint)

    PMID:bio_10.1101_2025.03.25.645338

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • Whether this pathway underlies the CNS or coat-color phenotypes not tested
  8. 2025 Medium

    Established transmembrane ATRN as a shared cell-surface entry receptor for a modular family of bacterial exotoxins with diverse effector domains.

    Evidence Insect CRISPR screen and functional toxin entry assays across multiple toxins (preprint)

    PMID:bio_10.1101_2025.10.08.681221

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • ATRN domain mediating toxin binding not mapped
    • Relevance to mammalian/human ATRN not confirmed

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ATRN's distinct activities—immune adhesion, MGRN1-mediated receptor degradation, CNS myelination, and actomyosin regulation—are mechanistically connected through its domain architecture remains unresolved.
  • No unifying molecular mechanism links the immune, neural, and receptor-regulation roles
  • Functional roles of individual ATRN domains untested
  • Mechanism by which ATRN loss causes hypomyelination undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0001618 virus receptor activity 1 GO:0016787 hydrolase activity 1 GO:0060090 molecular adaptor activity 1
Localization
GO:0005576 extracellular region 3 GO:0005886 plasma membrane 3
Pathway
R-HSA-168256 Immune System 2 R-HSA-392499 Metabolism of proteins 1

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1998 Attractin (DPPT-L/ATRN) is a 175 kDa serum glycoprotein secreted by activated T lymphocytes that mediates monocyte spreading and the clustering of non-proliferating T lymphocytes around those monocytes, establishing its role in modulating immune cell interactions. Protein cloning, functional cell adhesion/clustering assays with recombinant protein Proceedings of the National Academy of Sciences of the United States of America Medium 9736737
1998 Attractin protein contains a putative serine protease catalytic serine, four EGF-like motifs, a CUB domain, a C-type lectin domain, and a domain homologous to the ligand-binding region of the common gamma cytokine chain, defining its domain architecture. cDNA cloning and sequence analysis Proceedings of the National Academy of Sciences of the United States of America Medium 9736737
1996 The 175-kDa serum form of DPPT-L (ATRN) is antigenically and biochemically distinct from the 105-kDa CD26/DPPIV, yet possesses DPPIV enzymatic activity and functions as a co-stimulatory molecule for T-cell responses to recall antigen (tetanus toxoid). Biochemical characterization, enzymatic activity assay, T-cell co-stimulation functional assay Journal of immunology (Baltimore, Md. : 1950) Medium 8596018
2000 Soluble and membrane-bound isoforms of human ATRN arise from alternative splicing: the soluble form uses 25 sequential exons with a terminal LINE-1 retrotransposon-derived exon providing a stop codon and polyadenylation signal, while the membrane form splices over this LINE-1 exon to include five additional exons encoding transmembrane and cytoplasmic domains. Genomic structure determination, RT-PCR isoform quantification, sequence analysis Proceedings of the National Academy of Sciences of the United States of America High 10811918
2000 Activation of peripheral blood leukocytes with PHA induces strong surface expression of membrane ATRN followed by its release as soluble ATRN into the medium, establishing the sequential relationship between membrane and secreted isoforms during an inflammatory response. RT-PCR and functional secretion assay on PHA-activated leukocytes Proceedings of the National Academy of Sciences of the United States of America Medium 10811918
2001 Loss-of-function mutations in the mouse Atrn (mahogany) gene cause severe spongiform vacuolization of the cerebrum, brainstem, granular layer of cerebellum, and spinal cord, establishing ATRN as required for CNS integrity independent of its coat-color and energy-metabolism roles. Genetic allelism tests, Northern blot (no Atrn expression), Southern blot (gene deletion), histopathological analysis of three independent Atrn mutant alleles Journal of neuropathology and experimental neurology High 11444801
2017 A homozygous splice-site mutation (c.3068+5G>A) in ATRN causing intronic sequence insertion and premature termination results in hypomyelinating leukodystrophy in humans, confirming that ATRN plays a critical role in central nervous system myelination. Whole exome sequencing, cDNA analysis of aberrant splicing product in patient samples Neurogenetics Medium 28493104
2017 Zebrafish maternal Atrn depletion causes severe epiboly defects by impairing actomyosin contractile ring formation; Atrn was identified as a binding partner of the demethylase Alkbh4 by yeast two-hybrid assay, and Atrn preferentially interacts with the active form of Alkbh4 to cooperatively regulate actin demethylation and actomyosin formation. CRISPR/Cas9 maternal mutant generation, morpholino knockdown, immunofluorescence of actin/NMII, yeast two-hybrid interaction assay International journal of biological sciences Medium 28924386
2025 Transmembrane ATRN (Attractin) functions as the cell-surface receptor for the bacterial exotoxin Nigritoxin (Ntx) from Vibrio, mediating toxin entry into cells; this ATRN-targeting entry domain is shared by at least two other toxins with unrelated effector domains (Rho-GTPase AMPylation and actin-targeting/proteolysis), establishing ATRN as a common entry receptor for a modular toxin family. Insect CRISPR screen identifying ATRN as required for toxin entry, functional toxin entry assays bioRxivpreprint Medium bio_10.1101_2025.10.08.681221
2025 Transmembrane ATRN acts as an adapter that recruits the E3 ubiquitin ligase MGRN1 (via interaction with MGRN1's RING domain) to melanocortin receptors MC1R and MC4R, enabling MGRN1-dependent ubiquitination and degradation of these receptors at the cell surface; loss of MGRN1 increases surface/ciliary MC4R in fibroblasts and elevates MC1R levels in melanocytes, enhancing eumelanin production. Co-immunoprecipitation (ATRN–MGRN1 interaction), functional ubiquitination/degradation assays for MC1R and MC4R, receptor surface localization by imaging bioRxivpreprint Medium bio_10.1101_2025.03.25.645338

Source papers

Stage 0 corpus · 27 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1998 Attractin (DPPT-L), a member of the CUB family of cell adhesion and guidance proteins, is secreted by activated human T lymphocytes and modulates immune cell interactions. Proceedings of the National Academy of Sciences of the United States of America 132 9736737
2010 Corrosion resistance and surface biocompatibility of a microarc oxidation coating on a Mg-Ca alloy. Acta biomaterialia 113 21145440
1996 Serum high molecular weight dipeptidyl peptidase IV (CD26) is similar to a novel antigen DPPT-L released from activated T cells. Journal of immunology (Baltimore, Md. : 1950) 74 8596018
2000 Secreted and membrane attractin result from alternative splicing of the human ATRN gene. Proceedings of the National Academy of Sciences of the United States of America 70 10811918
2009 Influence of artificial biological fluid composition on the biocorrosion of potential orthopedic Mg-Ca, AZ31, AZ91 alloys. Biomedical materials (Bristol, England) 48 19966381
2009 In vitro degradation and cytotoxicity of Mg/Ca composites produced by powder metallurgy. Acta biomaterialia 41 19815098
2001 Mice with mutations in the mahogany gene Atrn have cerebral spongiform changes. Journal of neuropathology and experimental neurology 29 11444801
2015 Anion inhibition studies of the dandruff-producing fungus Malassezia globosa β-carbonic anhydrase MgCA. Bioorganic & medicinal chemistry letters 26 26459213
2018 Characterization of unusual MgCa particles involved in the formation of foraminifera shells using a novel quantitative cryo SEM/EDS protocol. Acta biomaterialia 24 30026104
2019 PEO coatings design for Mg-Ca alloy for cardiovascular stent and bone regeneration applications. Materials science & engineering. C, Materials for biological applications 20 31546411
1975 The functional groups of the Mg-Ca ATPase from Escherichia coli. Canadian journal of biochemistry 18 237621
2015 Electrochemical characteristics of bioresorbable binary MgCa alloys in Ringer's solution: Revealing the impact of local pH distributions during in-vitro dissolution. Materials science & engineering. C, Materials for biological applications 17 26706546
2011 Microstructure and characteristics of the metal-ceramic composite (MgCa-HA/TCP) fabricated by liquid metal infiltration. Journal of biomedical materials research. Part B, Applied biomaterials 16 21887765
2010 Effects of degradable Mg-Ca alloys on dendritic cell function. Journal of biomaterials applications 16 20207778
2017 Alkbh4 and Atrn Act Maternally to Regulate Zebrafish Epiboly. International journal of biological sciences 12 28924386
2013 Effect of sterilization process on surface characteristics and biocompatibility of pure Mg and MgCa alloys. Materials science & engineering. C, Materials for biological applications 12 23910326
2024 In vitro and in vivo degradation, biocompatibility and bone repair performance of strontium-doped montmorillonite coating on Mg-Ca alloy. Regenerative biomaterials 9 38605854
2017 Hypomyelinating leukodystrophy associated with a deleterious mutation in the ATRN gene. Neurogenetics 9 28493104
2019 Hierarchical Functionalized Polymeric-Ceramic Coatings on Mg-Ca Alloys for Biodegradable Implant Applications. Macromolecular bioscience 7 31490621
2004 PCR-based genotyping of the rat Atrn(mv) mutation. Experimental animals 6 14993747
2025 Manipulating Mg/Ca ratios in MgO-CaO-SiO2 bioactive glass for achieving accelerated osteogenic differentiation of human adipose-derived stem cells. Biomaterials advances 3 39826260
2024 MgCa-Based Alloys Modified with Zn- and Ga-Doped CaP Coatings Lead to Controlled Degradation and Enhanced Bone Formation in a Sheep Cranium Defect Model. ACS biomaterials science & engineering 2 38875708
2026 DUW-MGCA: A Dynamic Uncertainty-Weighted Multi-Granularity Coattention Framework for Protein-Ligand Interaction Prediction from Hybrid QM/MD Data. Journal of chemical information and modeling 0 41941312
2026 Predictive In Vitro Diagnostic Screening of Strontium-Enriched Biodegradable Mg-Ca Alloys for Emerging Dental Applications. Diagnostics (Basel, Switzerland) 0 41975773
2024 The effect of carbonic anhydrase on foraminiferal Mg/Ca. PeerJ 0 39624125
2004 [Genetic linkage between Atrn gene and microsatellite markers and the effects to some economic traits in pigs]. Yi chuan xue bao = Acta genetica Sinica 0 15633643
2003 [Progress in Attractin(mahogany/ATRN) gene]. Yi chuan = Hereditas 0 15639969

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