Affinage

ASB1

Ankyrin repeat and SOCS box protein 1 · UniProt Q9Y576

Length
335 aa
Mass
37.0 kDa
Annotated
2026-04-28
39 papers in source corpus 8 papers cited in narrative 8 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ASB1 is an ankyrin repeat and SOCS box-containing protein that functions as the substrate-recognition subunit of a Cullin5-Rbx2-Elongin B/C (CRL5) E3 ubiquitin ligase complex, targeting substrates including SQOR and CHCHD3 for K48-linked polyubiquitination and proteasomal degradation (PMID:16325183, PMID:39733518, PMID:39113857). In the testis, ASB1-mediated degradation of SQOR maintains hydrogen sulfide homeostasis and redox balance during spermiogenesis, and Asb1 knockout mice exhibit diminished spermatogenesis (PMID:11509662, PMID:39733518). ASB1 also possesses a non-canonical, E3 ligase-independent function in which it binds TAB2 and inhibits its K48-linked ubiquitination, stabilizing TAB2 to promote NF-κB and MAPK inflammatory signaling downstream of cytokine and LPS stimulation (PMID:33431678). In prostate cancer cells, ASB1-directed ubiquitination and degradation of the mitochondrial protein CHCHD3 suppresses proliferation and migration through modulation of reactive oxygen species (PMID:39113857).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 1998 Medium

    ASB1 was classified within a new protein family defined by ankyrin repeats and a C-terminal SOCS box, establishing it as part of the SOCS box superfamily and predicting a role in protein-protein interaction and possible Elongin-mediated degradation pathways.

    Evidence Database homology search and structural domain classification

    PMID:9419338

    Open questions at the time
    • No direct biochemical activity demonstrated for ASB1
    • Substrates unknown
    • Expression pattern only partially characterized
  2. 2000 Medium

    Molecular cloning of ASB1 confirmed its domain architecture and suggested its SOCS box couples binding partners to Elongin B/C for potential degradation, providing a mechanistic framework before direct biochemical evidence existed.

    Evidence Molecular cloning, expression analysis, and sequence characterization

    PMID:11111040

    Open questions at the time
    • Elongin B/C interaction not directly demonstrated for ASB1
    • No functional assay performed
  3. 2001 High

    Genetic loss-of-function established that ASB1 is dispensable for hematopoiesis and general development but specifically required for normal spermatogenesis, identifying its principal physiological context.

    Evidence Asb1 knockout and overexpression mouse models with histological analysis of testes and hematopoietic compartments

    PMID:11509662

    Open questions at the time
    • Molecular substrate(s) in the testis not identified
    • Mechanism linking ASB1 to spermatogenic defect unknown
  4. 2005 High

    Biochemical demonstration that ASB1 assembles with Cullin5 and Rbx2 via its BC box and Cul5 box to form a functional E3 ubiquitin ligase complex resolved the catalytic mechanism predicted by domain homology.

    Evidence Co-immunoprecipitation, BC box and Cul5 box mutagenesis, and in vitro ubiquitin ligase activity assay

    PMID:16325183

    Open questions at the time
    • No physiological substrate identified for the ASB1-CRL5 complex
    • Ubiquitin chain linkage type not determined
  5. 2013 High

    Structural determination of the homologous ASB9-Elongin B/C-Cul5 ternary complex revealed the architecture by which ASB ankyrin repeat domains present substrates toward the E2-ubiquitin active site, providing a generalizable structural model for ASB1.

    Evidence X-ray crystallography of ASB9-ElonginB/C complex with structural modeling

    PMID:23806657

    Open questions at the time
    • No ASB1-specific structure solved
    • Substrate docking geometry for ASB1 ankyrin repeats not determined
  6. 2021 High

    Discovery that ASB1 stabilizes TAB2 by inhibiting its K48-linked ubiquitination — rather than promoting degradation — revealed a non-canonical anti-degradative function that activates NF-κB and MAPK inflammatory signaling in vivo.

    Evidence Reciprocal Co-IP; K48-linkage-specific ubiquitination assays; Asb1 KO mice challenged with Salmonella typhimurium, LPS, and DSS colitis model; cycloheximide chase

    PMID:33431678

    Open questions at the time
    • Mechanism by which ASB1 blocks TAB2 ubiquitination (competitive, allosteric, or E3 ligase recruitment inhibition) not defined
    • Identity of the E3 ligase that ubiquitinates TAB2 in the absence of ASB1 unknown
  7. 2024 High

    Identification of SQOR as a direct ASB1-CRL5 substrate ubiquitinated at K207 and K344 linked the spermatogenesis defect of Asb1 KO mice to accumulation of SQOR, disrupted H₂S homeostasis, and oxidative stress during spermiogenesis.

    Evidence Co-IP of ASB1-ELOB; K48-linked ubiquitination assay with K207/K344 mutagenesis; Asb1 KO mouse with NaHS rescue; H₂S and oxidative stress measurements

    PMID:39733518

    Open questions at the time
    • Whether SQOR is the sole spermatogenesis-relevant substrate is unknown
    • Contribution of Cul5/Rbx2 vs. other E3 components not re-examined in testis
  8. 2024 High

    Identification of CHCHD3 as a second direct ASB1 substrate extended the CRL5-dependent degradation mechanism to a mitochondrial target whose accumulation drives ROS-dependent prostate cancer cell proliferation.

    Evidence Quantitative MS interactome; Co-IP; cycloheximide chase; ubiquitination assay; knockdown/overexpression rescue in prostate cancer cells

    PMID:39113857

    Open questions at the time
    • Specific ubiquitination sites on CHCHD3 not mapped
    • In vivo tumor suppression by ASB1 not tested
    • Whether CHCHD3 degradation is relevant outside prostate cancer unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include how ASB1 switches between its canonical E3 ligase substrate-degradation mode and its non-canonical TAB2-stabilizing function, whether additional substrates exist, and how ASB1 activity is itself regulated.
  • No structural model of ASB1 itself or ASB1-substrate complexes
  • Regulatory inputs controlling ASB1 expression or activity (post-translational modification, transcriptional regulation beyond initial cloning data) poorly defined
  • Mechanism distinguishing degradative vs. stabilizing modes unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016874 ligase activity 3 GO:0140096 catalytic activity, acting on a protein 3 GO:0098772 molecular function regulator activity 1
Pathway
R-HSA-392499 Metabolism of proteins 3 R-HSA-1474165 Reproduction 2 R-HSA-162582 Signal Transduction 1 R-HSA-168256 Immune System 1
Complex memberships
CRL5 (Cullin5-Rbx2-ElonginB/C-ASB1)

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1998 ASB1 was identified as a member of a new family of proteins containing ankyrin repeats N-terminal of a SOCS box motif, placing it in the SOCS box protein superfamily alongside SOCS, WSB, and SSB families. Database sequence homology search using SOCS box consensus; structural classification Proceedings of the National Academy of Sciences of the United States of America Medium 9419338
2000 ASB1 (Asb-1) was cloned and characterized as an ankyrin repeat and SOCS box-containing protein; the SOCS box was proposed to couple ASB proteins and their binding partners to the elongin B/C complex, potentially targeting them for degradation. Molecular cloning, expression analysis, sequence characterization Gene Medium 11111040
2001 Asb-1 knockout mice develop normally with normal hematopoiesis, but display diminished spermatogenesis with less complete filling of seminiferous tubules, establishing a specific role for Asb-1 in testicular spermatogenesis. Genetic knockout and overexpression mouse models; histological analysis of testes and hematopoietic compartment Molecular and cellular biology High 11509662
2005 ASB proteins, including ASB1, interact with Cullin5 (Cul5) and Rbx2 to form E3 ubiquitin ligase complexes; the BC box and Cul5 box sequences within the SOCS box of ASB1 are essential for interaction with Cul5-Rbx2, and the resulting complex has E3 ubiquitin ligase activity. Co-immunoprecipitation in cells; mutational analysis of BC box and Cul5 box; in vitro ubiquitin ligase activity assay FEBS letters High 16325183
2013 Crystal structures of the related family member ASB9 in ternary complex with Elongin B/C and the N-terminal domain of Cul5 revealed that ASB ankyrin domains are positioned coaxial to the SOCS box-Elongin B/C complex, providing a model for how the ankyrin substrate-binding domain is presented toward the E2-ubiquitin in the complete Cul5-based E3 ligase; this architecture is distinct from other repeat-domain E3 ligases. X-ray crystallography of ASB9-ElonginB/C ternary complex; structural comparison modeling Journal of molecular biology High 23806657
2021 ASB1 positively regulates inflammatory responses by binding TAB2 and inhibiting its K48-linked polyubiquitination, thereby stabilizing TAB2 protein and promoting downstream NF-κB and MAPK signaling upon cytokine and LPS stimulation; this is a non-canonical function distinct from the typical E3 ligase-mediated degradation role of ASB family members. Co-immunoprecipitation; ubiquitination assays (K48-linkage specific); Asb1 knockout mice challenged with Salmonella typhimurium or LPS; dextran sodium sulfate colitis model; cycloheximide chase; Western blot Proceedings of the National Academy of Sciences of the United States of America High 33431678
2024 ASB1 acts as the substrate recognition subunit of a CRL5 E3 ubiquitin ligase that interacts with Elongin B (ELOB) and targets sulfide-quinone oxidoreductase (SQOR) for K48-linked ubiquitination at residues K207 and K344, leading to proteasomal degradation of SQOR; this process maintains H2S homeostasis and redox balance during spermiogenesis. Co-immunoprecipitation (ASB1-ELOB interaction); K48-linked ubiquitination assay; site-directed mutagenesis of SQOR ubiquitination sites (K207, K344); Asb1 knockout mouse model; NaHS rescue experiment; oxidative stress and H2S level measurements Redox biology High 39733518
2024 ASB1 interacts with CHCHD3 and promotes its degradation via K48-linked ubiquitination, thereby suppressing prostate cancer cell proliferation, clonogenicity, and migration through the CHCHD3/ROS pathway. Quantitative mass spectrometry interactome analysis; co-immunoprecipitation; cycloheximide chase assay; ubiquitination assay; ASB1 knockdown/overexpression with phenotypic readout; cell rescue experiments American journal of cancer research High 39113857

Source papers

Stage 0 corpus · 39 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1998 Twenty proteins containing a C-terminal SOCS box form five structural classes. Proceedings of the National Academy of Sciences of the United States of America 621 9419338
2005 A Link between ethylene and auxin uncovered by the characterization of two root-specific ethylene-insensitive mutants in Arabidopsis. The Plant cell 328 15980261
2013 Spatial coordination between stem cell activity and cell differentiation in the root meristem. Developmental cell 104 23987513
2005 ASB proteins interact with Cullin5 and Rbx2 to form E3 ubiquitin ligase complexes. FEBS letters 98 16325183
1993 Suppressors of trp1 fluorescence identify a new arabidopsis gene, TRP4, encoding the anthranilate synthase beta subunit. The Plant cell 93 8400875
2015 Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals. PLoS genetics 73 26588211
2005 Identification of differentially expressed genes in metastatic and non-metastatic nasopharyngeal carcinoma cells by suppression subtractive hybridization. Cellular oncology : the official journal of the International Society for Cellular Oncology 66 16308470
2001 Functional analysis of Asb-1 using genetic modification in mice. Molecular and cellular biology 54 11509662
2017 Indole-3-butyric acid promotes adventitious rooting in Arabidopsis thaliana thin cell layers by conversion into indole-3-acetic acid and stimulation of anthranilate synthase activity. BMC plant biology 50 28693423
2000 Cloning and characterization of the genes encoding the ankyrin repeat and SOCS box-containing proteins Asb-1, Asb-2, Asb-3 and Asb-4. Gene 48 11111040
2011 Helicobacter heilmannii sp. nov., isolated from feline gastric mucosa. International journal of systematic and evolutionary microbiology 45 21421932
2005 Expression of the Arabidopsis feedback-insensitive anthranilate synthase holoenzyme and tryptophan decarboxylase genes in Catharanthus roseus hairy roots. Journal of biotechnology 38 16188339
1996 Clara cell protein (CC-16) and surfactant-associated protein A (SP-A) in asbestos-exposed workers. Chest 38 8620724
2017 Anxiety Associated Increased CpG Methylation in the Promoter of Asb1: A Translational Approach Evidenced by Epidemiological and Clinical Studies and a Murine Model. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 34 28540928
2016 Liuwei Dihuang Pill () Treats Postmenopausal Osteoporosis with Shen (Kidney) Yin Deficiency via Janus Kinase/Signal Transducer and Activator of Transcription Signal Pathway by Up-regulating Cardiotrophin-Like Cytokine Factor 1 Expression. Chinese journal of integrative medicine 33 28028720
2013 Molecular architecture of the ankyrin SOCS box family of Cul5-dependent E3 ubiquitin ligases. Journal of molecular biology 30 23806657
2023 Biosynthesis- and transport-mediated dynamic auxin distribution during seed development controls seed size in Arabidopsis. The Plant journal : for cell and molecular biology 28 36648165
2021 Coordinated cytokinin signaling and auxin biosynthesis mediates arsenate-induced root growth inhibition. Plant physiology 25 33793921
2021 An unconventional role of an ASB family protein in NF-κB activation and inflammatory response during microbial infection and colitis. Proceedings of the National Academy of Sciences of the United States of America 23 33431678
2006 Two new behavioral QTLs, Emo4 and Reb1, map to mouse Chromosome 1: Congenic strains and candidate gene identification studies. Mammalian genome : official journal of the International Mammalian Genome Society 23 16465591
2006 Lactobacillus apodemi sp. nov., a tannase-producing species isolated from wild mouse faeces. International journal of systematic and evolutionary microbiology 22 16825652
1967 Glutaraldehyde activation of nuclear acid phosphatase in cultured plant cells. Science (New York, N.Y.) 19 6020287
2024 ASB1 engages with ELOB to facilitate SQOR ubiquitination and H2S homeostasis during spermiogenesis. Redox biology 18 39733518
2006 ASB-1, a germline-specific isoform of mitochondrial ATP synthase b subunit, is required to maintain the rate of germline development in Caenorhabditis elegans. Mechanisms of development 17 17223323
2018 ASB1 differential methylation in ischaemic cardiomyopathy: relationship with left ventricular performance in end-stage heart failure patients. ESC heart failure 15 29667349
2021 Comprehensive Analysis of mRNA Expression Profiling and Identification of Potential Diagnostic Biomarkers in Coronary Artery Disease. ACS omega 14 34568680
2020 Integrating GWAS and eQTL to predict genes and pathways for non-syndromic cleft lip with or without palate. Oral diseases 14 33128317
2021 Function of histone H2B monoubiquitination in transcriptional regulation of auxin biosynthesis in Arabidopsis. Communications biology 12 33589721
2004 Molecular characterisation and ovine live vaccine 1B evaluation toward a Chlamydophila abortus strain isolated from springbok antelope abortion. Veterinary microbiology 10 15504594
1987 Zymograms of Kurloff cell acid phosphatases. Thin layer isoelectric focusing and native polyacrylamide 4-15% gradient gel electrophoresis. Biology of the cell 9 2955838
2020 New aryl Schiff bases of thiadiazole derivative of ibuprofen as DNA binders and potential anticancer drug candidates. Journal of biomolecular structure & dynamics 7 32397836
2023 4.5SH RNA counteracts deleterious exonization of SINE B1 in mice. Molecular cell 6 38096826
2010 Specific inhibition of protein kinase Cbeta expression by antisense RNA affects the activation of Jurkat T lymphoma cells. Journal of biological regulators and homeostatic agents 4 20846475
1978 The cytochemical demonstration of beta-glucuronidase in colon neoplasms of rats exposed to azoxymethane. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 4 621376
2024 ASB1 inhibits prostate cancer progression by destabilizing CHCHD3 via K48-linked ubiquitination. American journal of cancer research 3 39113857
2025 Characterization of three novel Helicobacter species infecting stomachs of dogs and cats: Helicobacter gastrocanis sp. nov., Helicobacter gastrofelis sp. nov., and Helicobacter felistomachi sp. nov. Frontiers in microbiology 2 39895936
2023 The Cytotoxicity of Cotyledon orbiculata Aqueous Extract and the Biogenic Silver Nanoparticles Derived from the Extract. Current issues in molecular biology 2 38132477
2022 Expression and Significance of Cyclin-Dependent Protein Kinase 6 in Diffuse Large B-Cell Lymphoma. International journal of general medicine 1 36133914
2025 Identification and validation of a thirteen-gene signature based on ubiquitin related genes in cervical cancer. Discover oncology 0 40465099