Affinage

ARPC2

Actin-related protein 2/3 complex subunit 2 · UniProt O15144

Round 2 corrected
Length
300 aa
Mass
34.3 kDa
Annotated
2026-04-28
52 papers in source corpus 18 papers cited in narrative 18 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ARPC2 is a core structural subunit of the heptameric Arp2/3 complex that, together with ARPC4, forms the central scaffold of the complex through long C-terminal α-helices and is essential for branched actin filament nucleation, cell migration, endocytosis, and metastasis (PMID:9230079, PMID:11721045, PMID:18381280, PMID:30710516). The Arp2/3 complex containing ARPC2 is recruited to sites of actin remodeling through direct interactions with cortactin, vinculin, and E-cadherin, coupling actin polymerization to lamellipodial protrusion, focal adhesion dynamics, and cell–cell adhesion (PMID:11018051, PMID:12473693, PMID:11882288). Small-molecule inhibitors benproperine and pimozide bind directly to ARPC2 at a pocket defined by residues F225, F247, and Y250, suppressing actin nucleation, lamellipodium formation, and tumor metastasis in vivo (PMID:30710516, PMID:31571309, PMID:36558913). ARPC2 also functions independently of the full Arp2/3 complex to promote TGF-β1–induced MRTFA nuclear translocation and fibrotic gene expression in lung fibroblasts (PMID:41898590).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 1997 High

    Identification of ARPC2 as a subunit of the Arp2/3 complex and its localization to lamellipodia established its role in dynamic actin assembly at the cell periphery, answering the question of which proteins compose the mammalian Arp2/3 complex.

    Evidence Protein purification, sequencing, and immunofluorescence microscopy in human fibroblasts and Listeria actin tails

    PMID:9230079

    Open questions at the time
    • No structural information on how ARPC2 integrates into the complex
    • Functional requirement for ARPC2 in actin nucleation not yet tested
  2. 2000 High

    Demonstration that cortactin directly interacts with the Arp2/3 complex and that this interaction is required for peripheral actin assembly revealed a key upstream recruitment mechanism for ARPC2-containing complexes.

    Evidence Affinity chromatography and immunoprecipitation with purified proteins, deletion mutagenesis, and immunofluorescence in fibroblasts

    PMID:11018051

    Open questions at the time
    • Specific ARPC2 contacts within the cortactin–Arp2/3 interface not mapped
    • Functional consequences of disrupting cortactin–Arp2/3 binding on actin nucleation kinetics not measured
  3. 2001 High

    The 2.0 Å crystal structure of the Arp2/3 complex resolved ARPC2 and ARPC4 as the central structural scaffold, answering how the seven subunits are architecturally organized and establishing ARPC2's core role.

    Evidence X-ray crystallography of the bovine Arp2/3 complex

    PMID:11721045

    Open questions at the time
    • Structure captured in the inactive conformation; how ARPC2 rearranges upon activation was unresolved
    • No mutational validation of predicted subunit contacts in this study
  4. 2002 High

    Physical associations of the Arp2/3 complex with vinculin and E-cadherin demonstrated that ARPC2-containing complexes are recruited to both integrin-based adhesions and cadherin-based cell–cell contacts, broadening its functional scope beyond lamellipodia.

    Evidence Co-immunoprecipitation, direct binding assays with purified proteins, mutagenesis of vinculin, and E-cadherin ligation assays

    PMID:11882288 PMID:12473693

    Open questions at the time
    • Whether ARPC2 itself directly contacts vinculin or E-cadherin was not distinguished from contacts through other subunits
  5. 2004 High

    Mutagenesis of yeast ARPC2 (arc35) defined three functionally separable surfaces—for actin nucleation, ARPC4 contact, and endocytosis—establishing that ARPC2 has distinct, non-overlapping roles in Arp2/3 complex functions.

    Evidence Integrated yeast mutant alleles, purification of mutant Arp2/3 complexes, in vitro actin assembly with WASp, and in vivo endocytosis assays

    PMID:18381280

    Open questions at the time
    • Whether mammalian ARPC2 retains identical functional surfaces was not tested
    • Structural basis of the endocytosis-specific surface unresolved
  6. 2015 Medium

    Discovery that ARPC2 binds microtubules in addition to actin, with mapping of a microtubule-binding domain, revealed an unexpected cytoskeletal crosstalk function.

    Evidence In vitro co-sedimentation with truncated ARPC2, GFP-ARPC2 live imaging in plant cells, pharmacological validation

    PMID:26706062

    Open questions at the time
    • Demonstrated in plant orthologs; confirmation of microtubule binding for mammalian ARPC2 not shown
    • Physiological consequence of microtubule binding unclear
  7. 2019 High

    Identification of benproperine and pimozide as direct ARPC2-binding inhibitors, with mutagenesis defining a drug-binding pocket at F225/F247/Y250, provided both pharmacological tools and a druggable surface on ARPC2 for anti-metastasis therapy.

    Evidence DARTS, CETSA, SPR, site-directed mutagenesis, actin polymerization assays, and in vivo metastasis models

    PMID:30710516 PMID:31571309 PMID:36558913

    Open questions at the time
    • Co-crystal structure of drug–ARPC2 complex not available
    • Selectivity for ARPC2 over other Arp2/3 subunits in vivo not fully characterized
  8. 2019 Medium

    ARPC2 mRNA was found to contain an IRES element with a G-quadruplex motif enabling cap-independent translation under stress, and RBM3 was shown to post-transcriptionally regulate ARPC2 protein levels via its 3ʹ-UTR, revealing multi-layered translational control of ARPC2 expression.

    Evidence Bicistronic reporters, RNA structural probing, RBM3 knockdown with 3ʹ-UTR binding analysis

    PMID:30720048 PMID:31387452

    Open questions at the time
    • In vivo relevance of IRES-mediated ARPC2 translation not tested
    • RBM3–ARPC2 axis validated only in breast cancer cells
  9. 2023 Medium

    Pharmacological ARPC2 inhibition disrupted intestinal stem cell homeostasis and activated YAP signaling, demonstrating that Arp2/3-dependent actin dynamics are required for ISC maintenance and Paneth cell differentiation.

    Evidence Benproperine treatment in vivo and in intestinal organoids, BrdU/EdU incorporation, IHC, flow cytometry

    PMID:37849945

    Open questions at the time
    • Genetic ARPC2 deletion in ISCs not performed
    • Whether YAP activation is a direct or indirect consequence of actin disruption not resolved
  10. 2025 Medium

    ARPC2 was shown to promote TGF-β1–induced MRTFA nuclear translocation and fibrotic gene expression independently of other Arp2/3 subunits, establishing a non-canonical, complex-independent function for ARPC2 in fibroblast-to-myofibroblast transition.

    Evidence ARPC2 overexpression and knockdown with separate ACTR2 depletion, nuclear/cytoplasmic fractionation, transcriptomics in MRC-5 fibroblasts

    PMID:41898590

    Open questions at the time
    • Mechanism by which ARPC2 alone modulates G-actin/MRTFA not defined
    • In vivo relevance in fibrotic disease models not tested
    • Single-lab finding requires independent replication

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key open questions include the structural basis of drug binding to ARPC2, whether ARPC2's complex-independent MRTFA regulation occurs in vivo, and whether ARPC2's microtubule-binding activity is conserved and functionally relevant in mammalian cells.
  • No co-crystal structure of any small molecule bound to ARPC2
  • Complex-independent ARPC2 functions demonstrated only in cultured fibroblasts
  • Microtubule binding shown only for plant orthologs

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 5 GO:0005198 structural molecule activity 2
Localization
GO:0005856 cytoskeleton 5 GO:0005886 plasma membrane 3 GO:0005829 cytosol 2
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-1500931 Cell-Cell communication 2 R-HSA-5653656 Vesicle-mediated transport 1
Complex memberships
Arp2/3 complex

Evidence

Reading pass · 18 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1997 ARPC2 (p34-Arc) was identified as a subunit of the human Arp2/3 complex, localized to lamellipodia of stationary and locomoting fibroblasts and to Listeria monocytogenes actin tails, implicating it in dynamic actin filament assembly at the cell periphery. Protein purification, sequence determination, and immunolocalization by immunofluorescence microscopy The Journal of cell biology High 9230079
2001 Crystal structure of the Arp2/3 complex at 2.0 Å resolution revealed that ARPC2 (p34) and ARPC4 (p20) form the structural core of the complex through long C-terminal alpha helices, with similarly folded N-terminal alpha/beta domains, positioning ARPC2 as a central scaffolding subunit. X-ray crystallography of bovine Arp2/3 complex Science High 11721045
2002 The Arp2/3 complex (containing ARPC2) was shown to bind directly to vinculin at its hinge region in a PIP2- and Rac1-dependent manner, coupling actin polymerization to integrin-mediated adhesion and lamellipodial protrusion. Co-immunoprecipitation, direct binding assays with purified proteins, point mutagenesis of vinculin, cell biological assays in vinculin-null cells The Journal of cell biology High 12473693
2002 E-cadherin physically associates with the Arp2/3 complex (including ARPC2) and can direct actin assembly at nascent adhesive contacts, demonstrating an instructive role for cadherin ligation in Arp2/3-mediated actin polymerization. Co-immunoprecipitation, affinity chromatography, functional recombinant E-cadherin ligation assay Current biology High 11882288
2000 Cortactin localizes with the Arp2/3 complex (including ARPC2) at lamellipodia via direct interaction through its N-terminal acidic (NTA) region, and this interaction is required for cortactin's peripheral localization and influences Arp2/3 actin nucleation activity. Affinity chromatography, immunoprecipitation, binding assays with purified components, deletion mutagenesis, immunofluorescence The Journal of cell biology High 11018051
2004 The yeast ortholog of ARPC2 (p35/arc35) was shown to be required for cell growth, actin organization, and endocytosis. Mutagenesis identified three key functional surfaces: one face required for actin nucleation and endocytosis, a contact surface with ARPC4 required for nucleation and endocytosis, and a distal surface critical for endocytosis but not nucleation. Yeast mutagenesis with integrated alleles, purification of mutant Arp2/3 complexes, in vitro actin assembly assays with and without WASp, endocytosis assays The Journal of biological chemistry High 18381280
2019 Benproperine (Benp) was identified as a direct inhibitor of ARPC2 that suppresses cancer cell migration and tumor metastasis. Benp binds directly to ARPC2 in cells, disrupts lamellipodial structure, and inhibits Arp2/3-dependent actin polymerization. ARPC2 knockdown phenocopied Benp treatment in suppressing migration and metastasis. Affinity column chromatography (Benp-Sepharose beads), pull-down assay with Benp-biotin, DARTS, CETSA, actin polymerization assay, wound-healing assay, animal metastasis models, siRNA knockdown Biochemical pharmacology High 30710516
2019 Pimozide directly binds to ARPC2 and inhibits cancer cell migration and invasion by increasing the lag phase of Arp2/3 complex-dependent actin polymerization and inhibiting vinculin-mediated recruitment of ARPC2 to focal adhesions. ARPC2 point mutants (F225A, F247A, Y250F) defined the binding pocket. CRISPR/Cas9 ARPC2 knockout, connectivity map drug discovery, DARTS, CETSA, actin polymerization assay, focal adhesion immunofluorescence, site-directed mutagenesis Cancer science High 31571309
2013 ARPC2 expression in vascular smooth muscle cells is induced downstream of NADPH oxidase 1 (Nox1) via H2O2 and p38 MAPK signaling, and ARPC2 is required for Nox1-mediated smooth muscle cell migration. 2D-DIGE/mass spectrometry proteomics, siRNA knockdown of Nox1 and ARPC2, Western blot, p38 MAPK inhibitor (SB203580), wound-healing scratch assay International journal of molecular sciences Medium 24152438
2014 FOXF1 transcriptionally represses ARPC2 expression in normal lung fibroblasts, and ARPC2 knockdown inhibits cell growth and collagen-1 expression, placing ARPC2 downstream of FOXF1 in an antifibrotic pathway. Loss-of-function and gain-of-function FOXF1 models, siRNA-ARPC2 knockdown, cell growth assays, COL1 expression analysis American journal of physiology. Lung cellular and molecular physiology Medium 25260753
2015 ARPC2 protein binds directly to microtubules in addition to actin filaments. A microtubule-binding domain in ARPC2 was mapped using truncated protein co-sedimentation assays. GFP-ARPC2 decorates microtubules in plant cells, and this interaction was validated pharmacologically. In vitro co-sedimentation assays with truncated ARPC2 proteins, GFP-ARPC2 live imaging in tobacco BY-2 cells and Arabidopsis, pharmacological cytoskeleton perturbation Plant science Medium 26706062
2019 The 5'-UTR of ARPC2 mRNA exists in two alternatively spliced variants; the longer variant harbors an IRES element containing a guanine-quadruplex motif that drives cap-independent translation, particularly under high cell density stress conditions. Bicistronic reporter constructs, chemical probing of RNA structure, G-quadruplex analysis, cell density-dependent protein expression measurement RNA biology Medium 31387452
2019 RBM3 upregulates ARPC2 protein expression by binding to the 3'UTR of ARPC2 mRNA in a post-transcriptional manner, and ARPC2 mediates RBM3's pro-proliferative and pro-metastatic effects in breast cancer cells. RBM3 knockdown, ARPC2 knockdown, cell proliferation and migration assays, 3'UTR binding analysis International journal of oncology Medium 30720048
2022 S-Benproperine (S-Benp), the active stereoisomer of benproperine, directly binds ARPC2 at residue F225 to suppress actin remodeling and lamellipodium formation, inhibiting cancer cell migration and metastasis; ARPC2-F225A mutant cells showed abolished S-Benp binding. Surface plasmon resonance (SPR), CETSA, DARTS, site-directed mutagenesis (ARPC2-F225A), Cy3-conjugated S-Benp colocalization, actin polymerization assay, animal metastasis model Pharmaceuticals High 36558913
2023 Inhibition of ARPC2 with benproperine (BPP) disrupts intestinal stem cell homeostasis, reducing Lgr5 ISC gene expression, impairing Paneth cell differentiation, and activating the YAP signaling pathway, demonstrating that Arp2/3-mediated actin polymerization is required for ISC maintenance. BPP treatment in vivo and in vitro (organoid culture), phalloidin staining, BrdU/EdU incorporation, flow cytometry, IHC, intestinal organoid assays Burns & trauma Medium 37849945
2024 In EPEC-infected cells depleted of ARPC2, overexpression of palladin (an actin cross-linking scaffolding protein) rescued actin pedestal length, demonstrating that palladin can substitute for Arp2/3 complex-mediated actin organization in a pathogen-induced structure. ARPC2 knockout cells (ArpC2-/-), palladin overexpression with actin/VASP-binding domain mutants, EPEC infection assay, pedestal length quantification Cytoskeleton Medium 39692253
2025 KLF7-IT1 (a lncRNA) stabilizes ARPC2 protein in macrophages, promoting intracellular LPS internalization and downstream caspase-4 activation and pyroptosis, leading to procoagulant activity in sepsis. ARPC2 silencing attenuated these effects. Transcriptomic profiling, KLF7-IT1 and ARPC2 siRNA knockdown, caspase-4 activation assays, gasdermin-D pyroptosis assays, phosphatidylserine exposure measurement, macrophage-neutrophil cross-talk assays Biochemical and biophysical research communications Medium 41275797
2026 ARPC2 promotes TGF-β1-induced fibrotic gene expression in lung fibroblasts by regulating nuclear translocation of MRTFA and modulating MRTFA/G-actin complex formation, acting independently of other ARP2/3 complex components in driving fibroblast-to-myofibroblast transition. ARPC2 overexpression and knockdown in MRC-5 cells, ARPC2/ACTR2/MRTFA depletion, nuclear/cytoplasmic fractionation, transcriptomic analysis, TGF-β1 stimulation assays International journal of molecular sciences Medium 41898590

Source papers

Stage 0 corpus · 52 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. Nature 3725 23128233
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2015 The BioPlex Network: A Systematic Exploration of the Human Interactome. Cell 1118 26186194
2017 Architecture of the human interactome defines protein communities and disease networks. Nature 1085 28514442
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2005 Nucleolar proteome dynamics. Nature 934 15635413
2009 A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. Cell 843 19490893
2003 Complete sequencing and characterization of 21,243 full-length human cDNAs. Nature genetics 754 14702039
2007 Large-scale mapping of human protein-protein interactions by mass spectrometry. Molecular systems biology 733 17353931
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2012 A census of human soluble protein complexes. Cell 689 22939629
2015 Gene essentiality and synthetic lethality in haploid human cells. Science (New York, N.Y.) 657 26472760
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
2008 Large-scale proteomics and phosphoproteomics of urinary exosomes. Journal of the American Society of Nephrology : JASN 607 19056867
2011 Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for β-Pix in negative regulation of focal adhesion maturation. Nature cell biology 490 21423176
2008 Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility. Nature genetics 485 18836448
2003 Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. Nature biotechnology 485 12665801
2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome research 438 15489334
2022 OpenCell: Endogenous tagging for the cartography of human cellular organization. Science (New York, N.Y.) 432 35271311
1997 The human Arp2/3 complex is composed of evolutionarily conserved subunits and is localized to cellular regions of dynamic actin filament assembly. The Journal of cell biology 430 9230079
2001 Crystal structure of Arp2/3 complex. Science (New York, N.Y.) 414 11721045
2015 Panorama of ancient metazoan macromolecular complexes. Nature 407 26344197
1999 Composite co-activator ARC mediates chromatin-directed transcriptional activation. Nature 363 10235267
2000 Cortactin localization to sites of actin assembly in lamellipodia requires interactions with F-actin and the Arp2/3 complex. The Journal of cell biology 355 11018051
2002 Recruitment of the Arp2/3 complex to vinculin: coupling membrane protrusion to matrix adhesion. The Journal of cell biology 339 12473693
2012 Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. PloS one 312 23251661
2016 Identification of Zika Virus and Dengue Virus Dependency Factors using Functional Genomics. Cell reports 306 27342126
2020 Phosphorylated tau interactome in the human Alzheimer's disease brain. Brain : a journal of neurology 290 32812023
2012 A high-throughput approach for measuring temporal changes in the interactome. Nature methods 273 22863883
2004 Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. Nature biotechnology 266 15146197
2002 Cadherin-directed actin assembly: E-cadherin physically associates with the Arp2/3 complex to direct actin assembly in nascent adhesive contacts. Current biology : CB 258 11882288
2004 DISTORTED2 encodes an ARPC2 subunit of the putative Arabidopsis ARP2/3 complex. The Plant journal : for cell and molecular biology 88 15086808
2004 Actin control over microtubules suggested by DISTORTED2 encoding the Arabidopsis ARPC2 subunit homolog. Plant & cell physiology 57 15295064
2019 Benproperine, an ARPC2 inhibitor, suppresses cancer cell migration and tumor metastasis. Biochemical pharmacology 43 30710516
2019 Pimozide suppresses cancer cell migration and tumor metastasis through binding to ARPC2, a subunit of the Arp2/3 complex. Cancer science 37 31571309
2019 ARPC2 promotes breast cancer proliferation and metastasis. Oncology reports 28 31002363
2014 Forkhead Box F1 represses cell growth and inhibits COL1 and ARPC2 expression in lung fibroblasts in vitro. American journal of physiology. Lung cellular and molecular physiology 28 25260753
2015 Arp2/3 complex subunit ARPC2 binds to microtubules. Plant science : an international journal of experimental plant biology 25 26706062
2008 Functional surfaces on the p35/ARPC2 subunit of Arp2/3 complex required for cell growth, actin nucleation, and endocytosis. The Journal of biological chemistry 25 18381280
2017 Role of ARPC2 in Human Gastric Cancer. Mediators of inflammation 23 28694563
2019 RBM3 upregulates ARPC2 by binding the 3'UTR and contributes to breast cancer progression. International journal of oncology 21 30720048
2019 Alternatively spliced variants of the 5'-UTR of the ARPC2 mRNA regulate translation by an internal ribosome entry site (IRES) harboring a guanine-quadruplex motif. RNA biology 15 31387452
2013 Proteomic analysis identifies an NADPH oxidase 1 (Nox1)-mediated role for actin-related protein 2/3 complex subunit 2 (ARPC2) in promoting smooth muscle cell migration. International journal of molecular sciences 15 24152438
2023 Intelectin enhances the phagocytosis of macrophages via CDC42-WASF2-ARPC2 signaling axis in Megalobrama amblycephala. International journal of biological macromolecules 8 36907302
2023 Actin polymerization inhibition by targeting ARPC2 affects intestinal stem cell homeostasis. Burns & trauma 6 37849945
2022 Gibberellic acid sensitive dwarf encodes an ARPC2 subunit that mediates gibberellic acid biosynthesis, effects to grain yield in rice. Frontiers in plant science 5 36618614
2022 S-Benproperine, an Active Stereoisomer of Benproperine, Suppresses Cancer Migration and Tumor Metastasis by Targeting ARPC2. Pharmaceuticals (Basel, Switzerland) 3 36558913
2024 Arpc2 integrates ecdysone and juvenile hormone metabolism to influence metamorphosis and reproduction in Tribolium castaneum. Pest management science 2 38477435
2024 Overexpressed Palladin Rescues Enteropathogenic E. coli (EPEC) Pedestal Lengths in ArpC2 Depleted Cells. Cytoskeleton (Hoboken, N.J.) 2 39692253
2025 KLF7-IT1-ARPC2 axis in macrophages orchestrates caspase-4-driven hypercoagulation in sepsis. Biochemical and biophysical research communications 1 41275797
2026 ARPC2 Promotes Pulmonary Fibrosis by Regulating MRTFA Activity Independent of the Canonical ARP2/3 Complex. International journal of molecular sciences 0 41898590
2004 [Construction and expression of the fusion vector of His-tagged human ARPC2 gene]. Di 1 jun yi da xue xue bao = Academic journal of the first medical college of PLA 0 15201074