Affinage

ALDH1B1

Aldehyde dehydrogenase X, mitochondrial · UniProt P30837

Length
517 aa
Mass
57.2 kDa
Annotated
2026-06-09
27 papers in source corpus 15 papers cited in narrative 15 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ALDH1B1 is a mitochondrial NAD+-dependent aldehyde dehydrogenase that detoxifies reactive aldehydes and serves as a determinant of progenitor cell identity, antiviral immunity, and tumorigenesis (PMID:7779080, PMID:31548432, PMID:38194477). The enzyme oxidizes short-chain aldehydes including acetaldehyde and propionaldehyde, and purified recombinant protein also metabolizes nitroglycerin, all-trans retinaldehyde, and the lipid-peroxidation product 4-hydroxynonenal; naturally occurring human variants differ in catalytic competence, with the A86V (ALDH1B1*2) substitution abolishing activity by impairing NAD+ binding (PMID:7779080, PMID:25413692). In vivo, ALDH1B1-mediated acetaldehyde clearance protects epithelial tissue: Aldh1b1-knockout mice accumulate blood and plasma acetaldehyde after ethanol exposure and develop aggravated intestinal hyperproliferation and tumor features, and combined loss with mismatch-repair deficiency drives colonic adenoma formation, establishing the enzyme as a barrier against acetaldehyde-induced DNA damage (PMID:26086111, PMID:28026023, PMID:37395714). ALDH1B1 marks self-renewing centroacinar pancreatic progenitors and is genetically required for both progenitor maintenance and KrasG12D-driven pancreatic oncogenesis, and its support of colon cancer spheroid and xenograft growth is accompanied by activation of Wnt/β-catenin, Notch, and PI3K/Akt signaling (PMID:25950950, PMID:31548432, PMID:23142317). In innate immunity, ALDH1B1 is an interferon-stimulated gene that interacts with the MAVS transmembrane domain to promote MAVS prion-like aggregation and IFN-β production, restricting RNA virus replication (PMID:38194477). Its abundance and activity are controlled at multiple levels: transcriptionally by NR5A2 (loss of which elevates ROS and triggers pyroptosis), post-translationally by AMBRA1/TRAF6-mediated K27/K33-linked noncanonical ubiquitination that constrains its oligomerization, and translation-independently by EIF4E, whose repression of ALDH1B1 in mitochondria sensitizes cells to ferroptosis by permitting 4-HNE accumulation (PMID:36274088, PMID:34769507, PMID:39438459).

Mechanistic history

Synthesis pass · year-by-year structured walk · 15 steps
  1. 1995 Medium

    Established that ALDH1B1 (ALDH5) is a catalytically active, mitochondrially enriched enzyme distinct in cofactor and inhibitor profile, answering whether the gene encodes a functional aldehyde dehydrogenase.

    Evidence Enzymatic assays, subcellular fractionation, and cofactor/inhibitor testing in HuH7 hepatoma extracts

    PMID:7779080

    Open questions at the time
    • Substrate range tested only for short-chain aldehydes
    • No recombinant protein or structural data
  2. 2012 Medium

    Defined the developmental context of ALDH1B1 by showing its expression in multipotent pancreatic progenitors under Pdx1 and Ngn3 control and that ALDH activity is needed for progenitor maintenance.

    Evidence ISH, immunofluorescence, and explant culture with ALDH inhibitor in developing pancreas

    PMID:23142317

    Open questions at the time
    • Pharmacological inhibitor not ALDH1B1-selective
    • Mechanism linking enzyme activity to progenitor state unknown
  3. 2012 Low

    Raised the possibility that ALDH1B1 activity is modulated by heterotetramerization with ALDH2, offering an explanation for absent compensatory activity in ALDH2*2 individuals.

    Evidence Computational protein-protein interaction modeling and sequence analysis

    PMID:23247008

    Open questions at the time
    • Computational prediction only; heterotetramer formation not experimentally validated
    • No functional dominant-negative data
  4. 2014 High

    Defined the substrate and variant landscape by showing recombinant ALDH1B1 metabolizes nitroglycerin, retinaldehyde, and 4-HNE, and that polymorphic variants differ in catalytic competence.

    Evidence In vitro assays with purified recombinant protein and polymorphic variants plus molecular modeling

    PMID:25413692

    Open questions at the time
    • Physiological relevance of each substrate not established in vivo
    • No crystal structure to confirm modeled binding modes
  5. 2015 High

    Demonstrated in vivo that ALDH1B1 metabolizes acetaldehyde and links it to glucose homeostasis, moving beyond in vitro activity to organismal function.

    Evidence Global Aldh1b1 knockout mice with ethanol pharmacokinetics and fasting glucose measurement

    PMID:26086111

    Open questions at the time
    • Mechanism connecting ALDH1B1 to glucose regulation unresolved
    • Tissue responsible for acetaldehyde clearance not pinpointed
  6. 2015 Medium

    Established a pro-tumorigenic role in colon cancer, showing ALDH1B1 knockdown reduces tumor growth and downregulates Wnt/β-catenin, Notch, and PI3K/Akt signaling.

    Evidence shRNA knockdown, spheroid and xenograft assays, signaling pathway and promoter reporter analysis in SW480 cells

    PMID:25950950

    Open questions at the time
    • Whether catalytic activity drives signaling not addressed
    • Direct molecular link between enzyme and Wnt/Notch/PI3K unknown
  7. 2017 High

    Showed that ALDH1B1-mediated acetaldehyde detoxification protects the intestinal epithelium, as its loss aggravates ethanol-induced hyperproliferation and tumor features.

    Evidence Long-term ethanol drinking model in Aldh1b1-knockout mice with histopathology and DNA damage quantification

    PMID:28026023

    Open questions at the time
    • Cooperating genetic events not yet defined in this study
    • Cell-of-origin within the epithelium not resolved
  8. 2019 High

    Provided genetic proof that Aldh1b1-expressing centroacinar cells are pancreatic progenitors and that ALDH1B1 is required for KrasG12D-driven pancreatic oncogenesis.

    Evidence Lineage tracing, Aldh1b1 KO crossed to KrasG12D model, scRNA-seq, and organoid assays

    PMID:31548432

    Open questions at the time
    • Mechanism by which ALDH1B1 enables Kras transformation not defined
    • Role of catalytic activity versus protein presence unclear
  9. 2019 Medium

    Connected methyltransferase signaling to ALDH1B1 in endocrine differentiation, showing Aldh1b1 is required for methyltransferase-inhibitor effects on Ngn3 and endocrine specification.

    Evidence Reporter-based small-molecule screen, pancreas explant culture, and Aldh1b1-null genetic epistasis

    PMID:30681750

    Open questions at the time
    • Methyltransferase target acting upstream unidentified
    • Molecular link between ALDH1B1 and Ngn3 regulation unknown
  10. 2021 Medium

    Identified post-translational control of ALDH1B1 via AMBRA1/TRAF6-mediated noncanonical ubiquitination that limits its oligomerization and downstream PTEN/β-catenin signaling.

    Evidence Co-IP, ubiquitination site mutagenesis, self-association assays, and gene expression analysis

    PMID:34769507

    Open questions at the time
    • Functional consequence of altered oligomerization on enzymatic activity not measured
    • Single-lab Co-IP; in vivo relevance untested
  11. 2022 High

    Revealed EIF4E as a translation-independent mitochondrial repressor of ALDH1B1 that, by limiting 4-HNE clearance, controls ferroptotic sensitivity.

    Evidence MS-based interactomics, reciprocal Co-IP, genetic KO/overexpression, and ferroptosis assays in vitro and in vivo

    PMID:36274088

    Open questions at the time
    • Mechanism of EIF4E mitochondrial localization to ALDH1B1 unresolved
    • Quantitative contribution of ALDH1B1 to lipid-peroxide pool not defined
  12. 2022 High

    Delivered active-site-directed selective inhibitors confirming ALDH1B1 is a druggable cancer dependency and linked its activity to mitochondrial metabolism and ribosomal gene programs.

    Evidence Active-site inhibitor development, proteome-wide selectivity profiling, spheroid/organoid assays, and transcriptomics

    PMID:35788181

    Open questions at the time
    • Direct substrates underlying the dependent transcriptome not identified
    • How enzyme activity shapes ribosomal/metabolic genes unknown
  13. 2023 High

    Showed ALDH1B1 acetaldehyde detoxification cooperates with mismatch-repair status, as its loss with Msh2 inactivation and ethanol drives colonic tumorigenesis.

    Evidence Aldh1b1/Msh2 double-knockout mice with ethanol exposure, plasma acetaldehyde measurement, and adenoma quantification

    PMID:37395714

    Open questions at the time
    • Molecular nature of acetaldehyde-induced lesions cooperating with dMMR not detailed
    • Human relevance of the genetic interaction untested
  14. 2024 High

    Defined a non-detoxification antiviral function, with ALDH1B1 binding the MAVS transmembrane domain to promote MAVS aggregation and IFN-β signaling that restricts RNA viruses.

    Evidence KO/overexpression, mitochondrial fractionation/imaging, reciprocal Co-IP, MAVS aggregation and IFN-β reporter assays, and in vivo influenza infection

    PMID:38194477

    Open questions at the time
    • Whether catalytic activity is required for MAVS aggregation unresolved
    • Structural basis of the ALDH1B1–MAVS interaction unknown
  15. 2024 Medium

    Established transcriptional control of ALDH1B1 by NR5A2 governing ROS levels and pyroptosis in hepatocytes.

    Evidence Hepatocyte-specific Nr5a2 KO mice, isoform reintroduction rescue, ROS and pyroptosis assays, and NF-κB analysis

    PMID:39438459

    Open questions at the time
    • Direct NR5A2 binding at the ALDH1B1 locus not confirmed in this study
    • Substrate basis of ALDH1B1-dependent ROS modulation undefined

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether the diverse roles of ALDH1B1 (acetaldehyde detoxification, ferroptosis control, oncogenic signaling, MAVS-dependent antiviral immunity) all depend on its catalytic activity, and what its physiological substrates are in each context, remains unresolved.
  • No structure of ALDH1B1 alone or in complex
  • Catalysis-versus-scaffold contributions to antiviral and oncogenic roles not dissected
  • Endogenous substrate spectrum in each tissue context undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016491 oxidoreductase activity 3 GO:0016787 hydrolase activity 2
Localization
GO:0005739 mitochondrion 4
Pathway
R-HSA-1430728 Metabolism 3 R-HSA-1643685 Disease 3 R-HSA-5357801 Programmed Cell Death 2 R-HSA-168256 Immune System 1

Evidence

Reading pass · 15 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1995 ALDH1B1 (then called ALDH5) encodes an enzymatically active aldehyde dehydrogenase that is active with short-chain aldehydes (acetaldehyde, propionaldehyde) and NAD+ but not NADP+, and its activity is enriched in the mitochondrial fraction and is insensitive to disulfiram inhibition. Enzymatic activity assay in HuH7 hepatoma cell extracts; subcellular fractionation; cofactor specificity testing Biochemical and biophysical research communications Medium 7779080
2014 Purified recombinant ALDH1B1 metabolizes nitroglycerin and all-trans retinaldehyde, and metabolizes 4-hydroxynonenal (4-HNE) with higher apparent affinity than previously described. The human polymorphic variant ALDH1B1*2 (A86V) is catalytically inactive due to poor NAD+ binding, while ALDH1B1*3 (L107R) and ALDH1B1*5 (M253V) retain activity. In vitro enzymatic assay with purified recombinant human ALDH1B1 and polymorphic variants expressed in bacterial system; computational molecular modeling for substrate and cofactor binding Pharmaceutical research High 25413692
2012 Computational modeling predicts that ALDH1B1 and ALDH2 subunits can form heterotetramers, suggesting that inactive ALDH2*2 mutants may suppress ALDH1B1 activity via dominant-negative heterotetramerization, consistent with the observed lack of compensatory ALDH1B1 activity in ALDH2*2 individuals. Computational-based molecular modeling of protein-protein interactions; phylogenetic and sequence analysis Chemico-biological interactions Low 23247008
2015 ALDH1B1 is a mitochondrial enzyme that metabolizes acetaldehyde in vivo; Aldh1b1 knockout mice show ~40% increased blood acetaldehyde levels after ethanol challenge, and also exhibit higher fasting blood glucose levels, implicating ALDH1B1 in glucose homeostasis. Global Aldh1b1 knockout mouse; ethanol pharmacokinetic analysis (blood acetaldehyde measurement); fasting blood glucose measurement Biochemical and biophysical research communications High 26086111
2015 shRNA-mediated knockdown of ALDH1B1 in SW480 colon cancer cells reduces spheroid formation and xenograft tumor growth, and downregulates Wnt/β-catenin, Notch, and PI3K/Akt signaling pathways; six TCF/LEF binding elements in the ALDH1B1 promoter were identified but shown by dual luciferase reporter assay to not be required for ALDH1B1 mRNA expression. shRNA knockdown; 3D spheroid assay; nude mouse xenograft model; dual luciferase reporter assay; Western blot and mRNA expression analysis of signaling pathway components PloS one Medium 25950950
2019 Aldh1b1-expressing centroacinar cells are adult pancreatic progenitors capable of self-renewal and contributing to all three pancreatic lineages. Genetic ablation of Aldh1b1 completely abrogates tumor development in a KrasG12D-driven pancreatic cancer mouse model, establishing Aldh1b1 as required for Kras-induced oncogenic transformation. Genetic lineage tracing; Aldh1b1 knockout combined with KrasG12D pancreatic cancer mouse model; single-cell RNA sequencing; organoid formation assay Proceedings of the National Academy of Sciences of the United States of America High 31548432
2022 EIF4E acts as an endogenous repressor of ALDH1B1 in mitochondria in a translation-independent manner. ALDH1B1 metabolizes the lipid peroxidation aldehyde 4-HNE; EIF4E-dependent inhibition of ALDH1B1 enhances ferroptotic sensitivity by allowing accumulation of lipid peroxidation products. Low concentrations of 4-HNE increase ferroptosis susceptibility by activating the NOX1 pathway. Mass spectrometry-based protein-protein interaction; co-immunoprecipitation; genetic KO and overexpression; in vitro and in vivo ferroptosis assays; 4-HNE treatment experiments Nature communications High 36274088
2022 Small-molecule inhibitors (bicyclic imidazoliums and guanidines) targeting the ALDH1B1 active site selectively abrogate ALDH1B1 enzymatic function in cells and block growth of colon cancer spheroids and organoids. Chemical and genetic perturbation of ALDH1B1 revealed a dependent transcriptome enriched for genes regulating mitochondrial metabolism and ribosomal function. Active-site-directed small molecule inhibitor development; proteome-wide target specificity profiling; colon cancer spheroid and organoid growth assays; transcriptomics after genetic KD and chemical inhibition Nature chemical biology High 35788181
2021 AMBRA1 negatively regulates ALDH1B1 by mediating its K27- and K33-linked noncanonical ubiquitination via cooperation with E3 ligase TRAF6. Ubiquitination sites K506, K511, and K515 are critical for K27-linked ubiquitination and K506 for K33-linked ubiquitination. Ubiquitination-defective ALDH1B1 mutants show increased self-association, suggesting ubiquitination negatively regulates ALDH1B1 oligomerization. AMBRA1 inversely regulates ALDH1B1-dependent expression of PTEN, β-catenin, and CSC-related β-catenin target genes. Co-immunoprecipitation; ubiquitination site mapping by mutagenesis; protein self-association assay; gene expression analysis International journal of molecular sciences Medium 34769507
2024 ALDH1B1 localizes to mitochondria and interacts with the transmembrane domain of MAVS to promote MAVS prion-like aggregation, enhancing RIG-I–MAVS interaction and IFN-β production. ALDH1B1 is an interferon-stimulated gene (ISG); its knockout increases RNA virus replication (VSV, ZIKV, DENV, IAV) and Aldh1b1-knockout mice develop more severe influenza symptoms. ALDH1B1 KO and overexpression in cells; mitochondrial localization by fractionation/imaging; co-immunoprecipitation of ALDH1B1 with MAVS transmembrane domain; MAVS aggregation assay; IFN-β reporter assay; in vivo influenza infection of Aldh1b1 KO mice Science signaling High 38194477
2024 NR5A2 transcriptionally regulates ALDH1B1 expression; loss of NR5A2 in hepatocytes reduces ALDH1B1, leading to elevated ROS, NF-κB pathway activation, and pyroptosis. Reintroduction of NR5A2 isoforms reverses pyroptosis in a manner dependent on ALDH1B1-mediated ROS modulation. Hepatocyte-specific Nr5a2 knockout mice; NR5A2 isoform reintroduction in haploinsufficient cell lines; ROS measurement; pyroptosis assays; NF-κB pathway analysis Cell death & disease Medium 39438459
2017 Aldh1b1 depletion in mice increases plasma acetaldehyde levels after ethanol consumption and significantly aggravates ethanol-induced intestinal hyperproliferation, leading to more advanced intestinal tumor features, establishing ALDH1B1 as a protective enzyme against acetaldehyde-induced intestinal damage. Aldh1b1-knockout mice with 1-year ethanol drinking water model; plasma acetaldehyde measurement; histopathological and immunohistochemical analysis; DNA damage quantification The Journal of pathology High 28026023
2019 Protein methyltransferase inhibition (via AMI-5) induces Aldh1b1 expression in pancreatic progenitors, maintains Aldh1b1 expression in embryonic pancreas explants, selectively reduces endocrine specification via downregulation of Ngn3, and this effect is abolished in Aldh1b1-null pancreata, establishing that methyltransferase activity regulates endocrine differentiation through Aldh1b1. Small molecule screen with mES Aldh1b1-lacZ reporter; embryonic pancreas explant culture; Aldh1b1-null genetic rescue experiment; Ngn3 expression analysis Stem cells Medium 30681750
2012 ALDH1B1 is expressed specifically in multipotent progenitor cells of the developing pancreas in a Pdx1-dependent manner during early development, and in a Ngn3-dependent manner in trunk epithelium at secondary transition. Blocking ALDH catalytic activity in pancreatic explants reduces explant size and accelerates differentiation, indicating ALDH activity is required for progenitor maintenance and expansion. In situ hybridization; immunofluorescence; explant culture with ALDH catalytic inhibitor; genetic analysis of Pdx1- and Ngn3-dependent expression Developmental biology Medium 23142317
2023 ALDH1B1 loss combined with Msh2 inactivation (Lynch syndrome model) and ethanol exposure significantly increases colonic adenoma formation and dMMR crypt foci, with elevated plasma acetaldehyde levels, demonstrating that ALDH1B1-mediated acetaldehyde detoxification in intestinal epithelium protects against acetaldehyde-driven DNA damage that cooperates with mismatch repair deficiency to drive colonic tumorigenesis. Conditional and constitutive Aldh1b1 KO combined with Lgr5-CreER Msh2 conditional KO mice; ethanol treatment; plasma acetaldehyde measurement; histopathological quantification of adenomas and crypt foci Disease models & mechanisms High 37395714

Source papers

Stage 0 corpus · 27 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Aldehyde dehydrogenase 1B1 (ALDH1B1) is a potential biomarker for human colon cancer. Biochemical and biophysical research communications 89 21216231
2022 A noncanonical function of EIF4E limits ALDH1B1 activity and increases susceptibility to ferroptosis. Nature communications 85 36274088
2015 ALDH1B1 Is Crucial for Colon Tumorigenesis by Modulating Wnt/β-Catenin, Notch and PI3K/Akt Signaling Pathways. PloS one 67 25950950
2019 Aldh1b1 expression defines progenitor cells in the adult pancreas and is required for Kras-induced pancreatic cancer. Proceedings of the National Academy of Sciences of the United States of America 52 31548432
2022 Targeting colorectal cancer with small-molecule inhibitors of ALDH1B1. Nature chemical biology 46 35788181
2012 ALDH1B1 is a potential stem/progenitor marker for multiple pancreas progenitor pools. Developmental biology 40 23142317
2015 ALDH1B1 links alcohol consumption and diabetes. Biochemical and biophysical research communications 35 26086111
1995 The novel aldehyde dehydrogenase gene, ALDH5, encodes an active aldehyde dehydrogenase enzyme. Biochemical and biophysical research communications 31 7779080
2014 Human ALDH1B1 polymorphisms may affect the metabolism of acetaldehyde and all-trans retinaldehyde--in vitro studies and computational modeling. Pharmaceutical research 23 25413692
2020 MicroRNA-761 suppresses tumor progression in osteosarcoma via negatively regulating ALDH1B1. Life sciences 20 33035586
2012 Comparative genomics, molecular evolution and computational modeling of ALDH1B1 and ALDH2. Chemico-biological interactions 15 23247008
2024 Hepatocyte-specific NR5A2 deficiency induces pyroptosis and exacerbates non-alcoholic steatohepatitis by downregulating ALDH1B1 expression. Cell death & disease 14 39438459
2017 Upregulation of ALDH1B1 promotes tumor progression in osteosarcoma. Oncotarget 14 29416787
2024 The aldehyde dehydrogenase ALDH1B1 exerts antiviral effects through the aggregation of the adaptor MAVS. Science signaling 12 38194477
2021 AMBRA1 Negatively Regulates the Function of ALDH1B1, a Cancer Stem Cell Marker, by Controlling Its Ubiquitination. International journal of molecular sciences 12 34769507
2023 The Concept of Cancer Stem Cells: Elaborating on ALDH1B1 as an Emerging Marker of Cancer Progression. Life (Basel, Switzerland) 11 36676146
2017 Effects of long-term ethanol consumption and Aldh1b1 depletion on intestinal tumourigenesis in mice. The Journal of pathology 11 28026023
1993 Diverse polymorphism within a short coding region of the human aldehyde dehydrogenase-5 (ALDH5) gene. Human genetics 11 8244338
2018 The murine hepatic sequelae of long-term ethanol consumption are sex-specific and exacerbated by Aldh1b1 loss. Experimental and molecular pathology 9 29859945
2020 Interplay between APC and ALDH1B1 in a newly developed mouse model of colorectal cancer. Chemico-biological interactions 7 33007288
2024 Exploring the Role and Pathophysiological Significance of Aldehyde Dehydrogenase 1B1 (ALDH1B1) in Human Lung Adenocarcinoma. International journal of molecular sciences 5 39408636
2017 Genetic variants in ALDH1B1 and alcohol dependence risk in a British and Irish population: A bioinformatic and genetic study. PloS one 5 28594837
2023 Acetaldehyde and defective mismatch repair increase colonic tumours in a Lynch syndrome model with Aldh1b1 inactivation. Disease models & mechanisms 4 37395714
2019 Protein Methyltransferase Inhibition Decreases Endocrine Specification Through the Upregulation of Aldh1b1 Expression. Stem cells (Dayton, Ohio) 4 30681750
2023 Multi-omics profiling reveals cellular pathways and functions regulated by ALDH1B1 in colon cancer cells. Chemico-biological interactions 3 37716420
2025 Metabolism-related ALDH1B1 acts as potential predictor and therapeutic target for primary gastrointestinal diffuse large B-cell lymphoma. Apoptosis : an international journal on programmed cell death 2 40216643
2025 Recent updates and future perspectives about ALDH1B1 as a potential anticancer target: a review. Journal of cancer research and clinical oncology 1 41258925

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