| 1994 |
The Ahcy gene (encoding S-adenosylhomocysteine hydrolase/SAHase) is required for early embryonic development; homozygous deletion of Ahcy in mice leads to embryonic death between the late blastocyst and early implantation stages. Treatment of cultured embryos with the SAHase inhibitor 3-deazaaristeromycin or with metabolites that elevate cellular SAH inhibited inner cell mass development, indicating that loss of SAHase activity is sufficient to explain lethality. |
Genetic deletion mapping, SAHase RNA/protein detection in blastocysts and ES cells, embryo culture with pharmacological SAHase inhibitor |
The EMBO journal |
High |
8168479
|
| 2008 |
AHCY-like proteins contain an IRBIT domain that serves as an anchor targeting them to cytoplasmic partners, enabling regulation of intracellular Ca2+ via the IP3 receptor and intracellular pH via Na+/HCO3- cotransporters; inactivation of the IRBIT domain induces nuclear translocation and modulation of AHCY activity. |
Review/synthesis of functional data including (de)phosphorylation, proteolysis, and protein–protein interaction studies reported in primary literature |
BioEssays |
Low |
18536033
|
| 2009 |
Two novel missense mutations in AHCY (p.Arg49Cys and p.Asp86Gly) dramatically reduce enzymatic activity. p.Arg49Cys forms intermolecular disulfide bonds creating macromolecular structures preventable by DTT. p.Asp86Gly forms enzymatically inactive aggregates; restoring a negative charge at position 86 (Gly→Glu) recovers ~70% of wild-type activity, whereas introducing positively charged or uncharged residues does not, establishing that the negative charge at residue 86 is important for catalytic activity. |
Recombinant protein expression, enzymatic activity assay, site-directed mutagenesis, reducing agent treatment, native PAGE |
Human mutation |
High |
19177456
|
| 2008 |
The A89V mutation in AHCY reduces enzymatic activity by ~70%, decreases thermal stability (unfolding temperature reduced by 5.5°C), and alters overall charge of the tetrameric complex without disrupting tetramer assembly. The mechanism involves steric incompatibility between Val89 and Thr84; substituting Thr84→Ser84 (smaller residue, similar chemistry) in the A89V background restores most catalytic activity, while introducing bulkier residues (Lys84, Gln84) inactivates wild-type protein. |
Recombinant protein expression, enzymatic activity assay, circular dichroism, gel filtration, native PAGE, site-directed mutagenesis |
Biochemical and biophysical research communications |
High |
18211827
|
| 2006 |
Two polymorphic AHCY isoforms (SAHH-2, R38W; SAHH-3, G123R) have slightly reduced enzymatic activity (≤6% decrease) and reduced thermal stability compared to wild-type, but no major changes in catalytic rates, as determined by recombinant protein analysis. |
Recombinant wild-type and polymorphic protein expression, enzymatic activity assay, circular dichroism |
European journal of human genetics |
Medium |
17164794
|
| 2017 |
Disease-causing AHCY mutations alter the nucleocytoplasmic distribution of AHCY protein compared to wild-type. Endogenous AHCY localizes to both cytoplasm and nucleus; nuclear export is not sensitive to leptomycin B. Systematic deletion mapping identified two regions (at both termini) contributing to nuclear localization, implying interactions with multiple proteins. AHCY interacts with its paralog AHCYL1 (SAHH-like-1) in vivo, and silencing AHCYL1 moderately inhibits nuclear export of endogenous AHCY. |
Fluorescence microscopy with GFP-tagged constructs, systematic deletion analysis, bimolecular fluorescence complementation (BiFC), leptomycin B treatment, siRNA knockdown |
European journal of cell biology |
Medium |
28647132
|
| 2018 |
AHCY knockdown in hepatocellular carcinoma cells causes adenosine depletion, which activates the DNA damage response (DDR), leading to cell cycle arrest, decreased proliferation, and DNA damage, establishing a functional link between AHCY enzymatic activity and maintenance of adenosine pools required for cell proliferation. |
siRNA knockdown, multi-omics (proteomics + metabolomics), DNA damage assays, cell cycle analysis |
Scientific reports |
Medium |
30228286
|
| 2019 |
AHCY is recruited to chromatin in proliferating embryonic stem cells and localizes to sites of active transcription and replication, correlating with demands for DNA, RNA, and histone methylation. Chromatin pull-down (Dm-ChP) identified AHCY as a chromatin-bound protein, and integration with genomic/functional data revealed a role for AHCY in gene activation and ribosomal protein production linked to cell division during early embryonic development. |
DNA-mediated chromatin pull-down (Dm-ChP), mass spectrometry, genomic integration, functional assays in pluripotent cells |
Science advances |
Medium |
30854431
|
| 2011 |
The geminivirus betasatellite protein βC1 directly interacts with plant SAHH (S-adenosylhomocysteine hydrolase) and inhibits its enzymatic activity in vitro, thereby suppressing methylation-mediated transcriptional gene silencing (TGS). Interaction was established by yeast two-hybrid and bimolecular fluorescence complementation. |
Yeast two-hybrid, bimolecular fluorescence complementation, in vitro SAHH enzyme activity assay, plant transient expression |
PLoS pathogens |
Medium |
22028660
|
| 2014 |
SAHH overexpression in esophageal squamous cell carcinoma (ESCC) cells promotes apoptosis, inhibits cell migration and adhesion (but does not affect proliferation or cell cycle). Co-immunoprecipitation demonstrated an interaction between SAHH and RACK1 (receptor for activated C kinase 1), and SAHH overexpression increased RACK1 protein levels. |
Overexpression in cell lines, apoptosis/migration/adhesion assays, co-immunoprecipitation, Western blotting |
Molecular biology reports |
Low |
24430301
|
| 2017 |
The reversible SAHH inhibitor DZ2002 suppresses TLR-mediated APC responses in lupus-prone mice, decreasing pathogenic Th17 cell development and inhibiting STAT3 phosphorylation and JNK/NF-κB signaling in splenocytes, establishing that SAHH activity is required for TLR-driven inflammatory signaling. |
Pharmacological inhibition (DZ2002) in vivo and ex vivo, ELISA, Western blot for phosphorylation, flow cytometry, BMDC-T cell co-culture |
Acta pharmacologica Sinica |
Medium |
24374810
|
| 2016 |
Metformin upregulates microRNA let-7 via AMPK activation, leading to degradation of the lncRNA H19, which normally binds to and inactivates SAHH. H19 knockdown activates SAHH, enabling DNMT3B-mediated methylation of a subset of genes, establishing H19 as a direct negative regulator of SAHH activity and linking SAHH to genome-wide DNA methylation changes. |
Cell line experiments, miRNA overexpression, lncRNA knockdown, DNMT activity assay, genome-wide methylation analysis, patient tissue validation |
Oncogene |
Medium |
27775072
|
| 2021 |
SAHH inhibition (via ADA inhibitor or heterozygous knockout) causes SAH accumulation, which reduces EZH2 histone methyltransferase activity and decreases H3K27me3 enrichment at the EGR1 promoter. EGR1 is thereby activated and binds to the TXNIP promoter, inducing TXNIP-mediated oxidative stress and NLRP3 inflammasome activation, aggravating diabetic nephropathy. |
Pharmacological inhibition, SAHH knockout mice, NLRP3/TXNIP KO mice, ChIP, Western blot, gene expression analysis, in vivo diabetic nephropathy model |
Redox biology |
High |
34119876
|
| 2020 |
AHCY copy number amplification (~30-fold) in a DZNep-resistant B-cell lymphoma clone results in strong overexpression of AHCY at both mRNA and protein levels, and persists in DZNep-free medium. This establishes AHCY as a direct target of DZNep (which blocks SAH hydrolysis), and its amplification as a resistance mechanism to the indirect EZH2 inhibitor. |
Copy number variation assay (OncoScan, TaqMan), FISH, Western blot, IHC, metabolomics in resistant vs. wild-type lymphoma cells |
BMC cancer |
Medium |
32408898
|
| 2022 |
Doxorubicin (DOX) directly binds to AHCY in living cells, leading to accumulation of S-adenosylhomocysteine. This was established by photoaffinity labeling chemoproteomics followed by validation with cellular thermal shift assay, affinity competitive pull-down, biochemical enzyme inhibition assay, and siRNA knockdown. |
Photoaffinity labeling chemoproteomics, cellular thermal shift assay, affinity competitive pull-down, biochemical enzyme activity assay, siRNA knockdown, untargeted metabolomics |
Analytical chemistry |
Medium |
36445716
|
| 2023 |
In C. elegans, introduction of the AHCY-1 Y145C variant (corresponding to human pathogenic Y143C mutation) impairs SAH hydrolysis, leading to moderately increased SAH and decreased SAM levels. This partial AHCY-1 deficiency extends lifespan in a manner dependent on AMPK, its activator VRK-1, and the transcription factor DAF-16, linking AHCY activity to aging via the AMPK/DAF-16 pathway. |
CRISPR knock-in of AHCY-1 Y145C in C. elegans, lifespan assay, SAM/SAH metabolite measurement, genetic epistasis with AMPK/VRK-1/DAF-16 mutants |
npj aging |
Medium |
38052822
|
| 2025 |
STIP1 (stress-induced phosphoprotein 1) physically interacts with AHCY and changes its conformation upon binding. The STIP1-AHCY interaction facilitates AHCY binding to lactate dehydrogenase A (LDHA), stimulating glycolysis. Additionally, AHCY recruits PRMT3 to methylate LDHA at R106, which inhibits ubiquitination-mediated AHCY degradation, establishing a moonlighting function for AHCY in regulating glycolytic metabolism via protein–protein interactions independent of its canonical SAH hydrolase activity. |
Co-immunoprecipitation, conformational change analysis, in vitro binding assays, PRMT3 methylation assay, ubiquitination assay, in vivo mouse tumorigenesis model |
Exploration (Beijing, China) |
Medium |
41163796
|
| 2025 |
Purified recombinant AHCY co-precipitates in vitro with HIV-1 integrase, indicating direct physical interaction. AHCY knockdown in human cells enhances HIV-1 reverse transcription efficiency (but not proviral transcription), establishing AHCY as a negative regulator of HIV-1 reverse transcription at early replication stages, a function in which integrase is also involved. |
In vitro co-precipitation of recombinant proteins, siRNA knockdown, HIV-1-based pseudovirus transduction assay, stage-specific replication assays |
Biochemistry. Biokhimiia |
Medium |
41354074
|
| 2026 |
The AHCY-adenosine complex increases mRNA m6A levels in a non-global, sequence-specific manner (at VWDRACH motifs) to promote fatty acid biosynthesis genes (ACACA, SCD1) and tumorigenesis. Mechanistically, adenosine binds AHCY to promote its dimerization; AHCY dimers physically obstruct binding of the m6A demethylase FTO at Q86, preventing FTO from demethylating target mRNAs. AHCY mutants that cannot dimerize or bind FTO but retain hydrolase activity suppress lipogenesis and tumor growth without affecting methionine catabolism, demonstrating a SAM-independent epigenetic function. |
Co-IP/binding assays, AHCY dimerization mutants, FTO-binding mutants, m6A sequencing, targeted metabolomics, in vivo tumor xenograft and patient-derived xenograft models, AHCY knockout mice |
Cell research |
High |
41549122
|
| 2024 |
MAT2A or AHCY knockdown/inhibition in glioblastoma cells induces oxidative stress, impairs mitochondrial respiration (specifically spare respiratory capacity), reduces cystathionine (a redox buffer), alters lipid and amino acid metabolism, prevents DNA damage protection, and reduces GBM cell survival, establishing AHCY as required for maintaining antioxidant metabolism and oxidative phosphorylation in GBM. |
Genetic knockdown (siRNA), pharmacological inhibition, mitochondrial respiration (Seahorse), targeted metabolomics, cell viability assay |
bioRxivpreprint |
Medium |
39605416
|
| 2026 |
β-hydroxybutyrate (BHB) induces lysine β-hydroxybutyrylation (Kbhb) of AHCY, inhibiting its enzymatic activity and causing SAH accumulation. This SAH accumulation downregulates DNMT1 activity and promotes demethylation of the Foxp3-TSDR region, enhancing Foxp3 transcription and regulatory T cell (Treg) differentiation. This establishes Kbhb as a post-translational modification that regulates AHCY activity. |
Metabolomics, transcriptomics, pyrosequencing, Kbhb modification analysis, AHCY activity measurement, flow cytometry for Tregs, in vivo IL-10 KO colitis model |
Journal of Crohn's & colitis |
Medium |
41527294
|
| 2025 |
Triptolide (TP) binds directly to AHCY with high affinity (KD = 3.179 × 10⁻¹¹ M), inhibiting its activity and causing SAH accumulation, DNA hypomethylation, metabolic dysfunction, and oxidative stress in liver cells. AHCY overexpression attenuates TP-induced hepatotoxicity, establishing AHCY as the direct molecular target mediating triptolide liver injury. |
Chemical proteomics, metabolomics, molecular dynamics simulation, surface plasmon resonance (SPR), AHCY overexpression rescue |
Phytomedicine |
Medium |
41391368
|
| 2024 |
AHCY inhibition in mouse and human adipocyte progenitor cells reduces proliferation and impairs differentiation into mature adipocytes. Global DNA methylation profiling showed AHCY inhibition alters CpG methylation at genes involved in fat cell differentiation and cellular growth pathways, establishing AHCY activity as necessary for adipogenic proliferation and differentiation. |
Pharmacological inhibition (AdOx), siRNA knockdown, proliferation assays, differentiation assays (ALP, adipogenic markers), genome-wide DNA methylation profiling |
Adipocyte |
Medium |
38064408
|
| 2026 |
VSMC-specific (but not macrophage-specific) knockout of SAHH in ApoE-deficient mice induces VSMC phenotype switching and decreases atherosclerotic plaque stability. Mechanistically, SAHH deficiency causes SAH accumulation, which inhibits DNMT3b, leading to hypomethylation of the KLF4 promoter and KLF4 upregulation. KLF4 then reactivates OCT4-mediated VSMC migration via TET1-mediated hydroxymethylation of the OCT4 promoter. AMPK inhibition by SAHH deletion also downregulates TET2-mediated KLF4 promoter hydroxymethylation. |
Cell-type-specific SAHH knockout mice, whole-genome bisulfite sequencing, RNA sequencing, ChIP, AMPK pathway analysis, plaque stability assessment, Western blot |
Arteriosclerosis, thrombosis, and vascular biology |
High |
42131918
|
| 2017 |
High-throughput mass spectrometry screening identified small molecules that competitively inhibit AHCY at the SAH binding site. Co-crystal structures of hit compounds with AHCY confirmed binding in the SAH site, and hit compounds increased intracellular SAH levels and inhibited growth of HCT116 cells, functionally validating AHCY enzymatic activity as an anti-tumor target. |
High-throughput enzymatic assay (RapidFire MS), co-crystal structure determination, cellular SAH measurement, cell growth inhibition assay |
Biochemical and biophysical research communications |
High |
28533090
|