Affinage

XIRP2

Xin actin-binding repeat-containing protein 2 · UniProt A4UGR9

Length
3374 aa
Mass
382.3 kDa
Annotated
2026-04-28
61 papers in source corpus 13 papers cited in narrative 13 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

XIRP2 is a muscle- and sensory-cell actin-binding protein that crosslinks and stabilizes actin filaments through its Xin-repeat domain and functions as a scaffold essential for intercalated disc maturation, cardiac conduction, and stereocilia maintenance. Its Xin repeats directly bind and bundle actin filaments in vitro, and in cardiomyocytes XIRP2 stabilizes filamin C in premyofibrils, is required for postnatal intercalated disc formation and proper localization of Xirp1, and associates with Nav1.5 and Kv1.5 ion channels to support normal cardiac conduction velocity (PMID:15454575, PMID:23261932, PMID:27206985, PMID:29306897). In inner ear hair cells, distinct XIRP2 splice isoforms maintain paracrystalline actin organization in stereocilia, and a C-terminal mechanosensor domain recruits XIRP2 to force-induced actin damage sites to facilitate γ-actin-dependent repair (PMID:25653358, PMID:37294664). Transcriptionally regulated by MEF2A downstream of angiotensin II signaling, XIRP2 hypomorphic reduction causes baseline cardiac hypertrophy and modulates angiotensin II–induced hypertrophy, fibrosis, and apoptosis (PMID:20093629).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2004 High

    Establishing that XIRP2's Xin repeats constitute a direct actin-binding and crosslinking module answered the fundamental question of its molecular activity and placed it alongside XIRP1 as an actin-associated scaffold.

    Evidence In vitro actin co-sedimentation, low-speed network assay, and cell transfection with domain constructs

    PMID:15454575

    Open questions at the time
    • Structural basis of Xin repeat–actin interaction unresolved
    • In vivo relevance of actin crosslinking not yet tested
    • Binding stoichiometry and affinity not quantified
  2. 2006 High

    Identifying XIRP2 as a direct MEF2A transcriptional target that interacts with α-actinin-2 at the Z-disc connected its expression control to a cardiac transcription factor and placed it at sarcomeric junctions.

    Evidence MEF2A knockout mouse with gene expression analysis and co-immunoprecipitation with α-actinin-2

    PMID:17046827

    Open questions at the time
    • Whether MEF2A is the sole transcriptional regulator unclear
    • Nature of α-actinin-2 interaction (direct or indirect) not fully resolved
  3. 2010 High

    Demonstrating that XIRP2 hypomorphic reduction causes baseline cardiac hypertrophy and modulates angiotensin II–induced remodeling established XIRP2 as a functional effector in the Ang II–MEF2A cardiac hypertrophy pathway.

    Evidence Xirp2 hypomorphic knock-in mouse with Ang II infusion, cardiac histology, and promoter analysis

    PMID:20093629

    Open questions at the time
    • Downstream signaling targets mediating hypertrophy and apoptosis unidentified
    • Whether XIRP2 acts through actin crosslinking or a separate signaling role in this context unknown
  4. 2012 High

    Showing that XIRP2-null mice fail to restrict intercellular junctions to cell termini postnatally resolved the question of whether XIRP2 is required for intercalated disc maturation, not merely a structural component.

    Evidence mXinβ knockout mouse with immunofluorescence, subcellular fractionation, and developmental time-course analysis

    PMID:23261932

    Open questions at the time
    • Mechanism by which XIRP2 drives junctional polarization unknown
    • Whether XIRP2 acts through actin remodeling or protein scaffolding at ICDs not distinguished
  5. 2014 Medium

    Establishing that XIRP2 is required for XIRP1 localization to ICDs and that its complete loss is postnatally lethal clarified a hierarchical dependency between the two Xin-repeat proteins.

    Evidence Xirp2 knockout and Xirp1/Xirp2 double-knockout mouse models with immunofluorescence

    PMID:24725425

    Open questions at the time
    • Molecular basis for XIRP1 dependence on XIRP2 for ICD targeting not defined
    • Evidence summarized in review; primary data spread across multiple sources
  6. 2015 High

    Discovering XIRP2 expression in inner ear hair cells and showing that its loss causes progressive stereocilia degeneration and hearing loss extended XIRP2 function beyond cardiac muscle to sensory actin structures, with isoform-specific localization to stereocilia versus cuticular plates.

    Evidence Two independent CRISPR/Cas9 and conventional Xirp2 knockout mice with ABR hearing tests, scanning/transmission EM, mass spectrometry, and isoform-specific immunolocalization

    PMID:25653358 PMID:25772365

    Open questions at the time
    • Specific isoform contributions to stereocilia versus cuticular plate function not genetically dissected
    • Whether hearing loss is solely due to actin disorganization or also involves mechanotransduction channel disruption unknown
  7. 2016 High

    Demonstrating by FRAP that XIRP2 stabilizes filamin C selectively in premyofibrils identified a specific sarcomeric client protein and differentiated XIRP2's role at early versus mature sarcomeric stages.

    Evidence FRAP in neonatal cardiomyocytes from Xirp2 knockout mice and transgenic zebrafish

    PMID:27206985

    Open questions at the time
    • Direct binding interface between XIRP2 and filamin C not mapped
    • Whether XIRP2 stabilizes other premyofibril components besides FLNc not tested
  8. 2018 High

    Linking XIRP2 loss to prolonged PR/QT intervals, AV block, and altered ionic currents — and showing XIRP2 co-immunoprecipitates with Nav1.5 and Kv1.5 — established a direct role in cardiac ion channel trafficking or surface stabilization.

    Evidence Xirp2 knockout mouse with ECG, whole-cell patch-clamp electrophysiology, and co-immunoprecipitation

    PMID:29306897

    Open questions at the time
    • Whether XIRP2 directly binds channel subunits or acts via an intermediate scaffold not resolved
    • Mechanism of altered surface expression (trafficking versus membrane retention) not determined
  9. 2023 High

    Identifying a C-terminal mechanosensor domain that recruits XIRP2 to force-damaged actin sites and showing XIRP2 facilitates γ-actin enrichment at stereocilia gaps revealed a damage-repair function and a novel force-sensing mechanism.

    Evidence Xirp2 knockout mouse with noise exposure, phalloidin gap staining, monomeric actin immunofluorescence, and force-dependent recruitment assay in fibroblasts

    PMID:37294664

    Open questions at the time
    • Structure of the mechanosensor domain and the biophysical basis of force sensing unresolved
    • Whether the repair function operates in cardiac actin structures not tested
    • Identity of cofactors that cooperate with XIRP2 during actin repair unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • Major open questions include the structural basis of Xin repeat–actin binding, how XIRP2 coordinates ion channel surface expression at intercalated discs, and whether its mechanosensor-mediated repair function extends to cardiac and skeletal muscle actin.
  • No crystal or cryo-EM structure of any XIRP2 domain
  • Mechanosensor domain activity not tested outside inner ear and cultured fibroblasts
  • Genetic dissection of individual isoform contributions in vivo lacking

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 4 GO:0060090 molecular adaptor activity 1 GO:0140299 molecular sensor activity 1
Localization
GO:0005856 cytoskeleton 6 GO:0005886 plasma membrane 2
Pathway
R-HSA-397014 Muscle contraction 3 R-HSA-9709957 Sensory Perception 3 R-HSA-162582 Signal Transduction 2

Evidence

Reading pass · 13 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 XIRP2 contains Xin repeats (16 amino acid repetitive units) that directly bind actin filaments in vitro and can arrange microfilaments into networks, as demonstrated by in vitro co-sedimentation assays with skeletal muscle actin and transfection experiments in cultured cells. Human XIRP2 contains 28 such Xin repeats with actin-binding properties identical to those of Xin/XIRP1. In vitro co-sedimentation (actin co-sedimentation assay), transfection of cultured cells, low-speed centrifugation network assay Journal of cell science High 15454575
2006 XIRP2 (myomaxin/CMYA3) is a direct transcriptional target of MEF2A; it is markedly down-regulated in MEF2A knockout hearts. The encoded protein localizes to the Z-disc/costameric region in striated muscle and interacts with the sarcomeric Z-disc protein alpha-actinin-2. MEF2A knockout mouse model (gene expression analysis), co-immunoprecipitation/interaction assay with alpha-actinin-2, immunolocalization The Journal of biological chemistry High 17046827
2010 Xirp2 expression in the heart is activated downstream of angiotensin II (Ang II) signaling via MEF2A transcriptional activity. Hypomorphic reduction of Xirp2 in mice leads to cardiac hypertrophy and increased beta-myosin heavy chain expression at baseline, and attenuates Ang II-induced hypertrophy, fibrosis, and apoptosis, placing Xirp2 as a functional effector in the MEF2A–Ang II cardiac remodeling pathway. Xirp2 hypomorphic knock-in mouse model, Ang II infusion, cardiac histology, promoter characterization, gene expression analysis Circulation research High 20093629
2012 mXinβ (mouse ortholog of XIRP2) is required for postnatal intercalated disc (ICD) maturation; it is uniquely upregulated during redistribution of intercellular junctions from lateral cardiomyocyte membranes to cell termini. In mXinβ-null mice, intercellular junctions fail to be restricted to cell termini by postnatal day 16.5. Subcellular fractionation and immunofluorescence showed preferential association of mXinβ with forming ICDs. mXinβ knockout mouse, quantitative Western blot, immunofluorescence, subcellular fractionation, double-knockout analysis Developmental biology High 23261932
2015 XIRP2 is expressed in inner ear hair cells with a specific short splice variant (XEPLIN) enriched in stereocilia, while long isoforms containing the XIN-repeat domain are distributed in both stereocilia and cuticular plates. CRISPR/Cas9-mediated elimination of XIRP2 in mice causes high-frequency hearing loss and stereocilia degeneration with disorganized paracrystalline actin filaments, indicating XIRP2 is required for maintenance of actin structures in hair bundle stereocilia. CRISPR/Cas9 knockout mouse, peptide mass spectrometry, auditory brainstem response (hearing function), scanning electron microscopy, ultrastructural analysis The Journal of neuroscience High 25653358
2015 Different XIRP2 isoforms are differentially localized in hair cells: short splice forms (XEPLIN) preferentially target stereocilia, while two long isoforms containing the XIN-repeat domain localize to both stereocilia and cuticular plates. Xirp2-null mice develop normal stereocilia bundles that degenerate over time, with stereocilia loss and emergence of long membranous protrusions from the apical surface. Xirp2 knockout mouse, isoform characterization, immunolocalization, electron microscopy, functional hearing assessment Cell reports High 25772365
2016 Both Xirp1 and Xirp2 stabilize filamin C (FLNc) selectively in premyofibrils of cardiomyocytes, as demonstrated by FRAP analysis of FLNc mobility in cardiomyocytes from Xirp1 and Xirp2 deficient animals showing that FLNc is more mobile (less stable) in the absence of these Xin proteins. FRAP (fluorescence recovery after photobleaching), Xirp1/Xirp2 knockout animals, live cell imaging in cultured neonatal mouse cardiomyocytes and transgenic zebrafish Human molecular genetics High 27206985
2018 Xirp2 is required for cardiac conduction; Xirp2 knockout mice exhibit prolonged PR and QT intervals, slow conduction velocity, atrioventricular conduction block, and abnormal infranodal ventricular conduction. Altered ionic currents were detected in Xirp2-/- cardiomyocytes by whole-cell patch-clamp. XIRP2 associates with Nav1.5 and Kv1.5 ion channel subunits as shown by co-immunoprecipitation, suggesting a role in ion channel surface expression. Xirp2 knockout mouse, electrocardiography, whole-cell patch-clamp, co-immunoprecipitation Journal of the American Heart Association High 29306897
2018 In stereocilia, the actin cross-linking protein XIRP2 (along with fascin-2, plastin-1, and espin) is part of the stable actin core but shows continuous turnover, distinct from the near-static actin filaments themselves. This was inferred from studies showing EGFP-fascin-2 displaces espin and plastin-1 from stereocilia, suggesting these cross-linkers compete for actin binding. Transgenic EGFP-fascin-2 mouse, live imaging, immunofluorescence comparison with XIRP2 and other cross-linkers Molecular biology of the cell Medium 29874122
2023 XIRP2 is required for repair of noise-induced F-actin damage ('gaps') in auditory hair cell stereocilia. XIRP2 facilitates enrichment of monomeric γ-actin at damage sites. Recruitment of XIRP2 to stereocilia gaps and to stress fiber strain sites in fibroblasts is force-dependent, mediated by a novel mechanosensor domain located in the C-terminus of XIRP2. Xirp2 knockout mouse, noise exposure, phalloidin staining for F-actin gaps, monomeric actin immunofluorescence, force-dependent recruitment assay in fibroblasts (mechanosensor domain characterization) eLife High 37294664
2013 XIRP2 protein accumulates in pathological protein aggregates in skeletal muscle fibers of desminopathy and filaminopathy patients, as identified by laser microdissection combined with label-free spectral count-based proteomics and validated by immunolocalization. Laser microdissection, label-free proteomics (spectral counting), immunolocalization, parallel reaction monitoring Journal of proteomics Medium 23639843
2014 mXinβ (XIRP2) is required for Xirp1 (mXinα) intercalated disc localization; in mXinβ-null hearts, mXinα fails to properly localize to ICDs. Complete loss of mXinβ results in failure of ICD formation, severe growth retardation, and early postnatal lethality. Xirp2 knockout and double-knockout (Xirp1/Xirp2) mouse models, immunofluorescence International review of cell and molecular biology Medium 24725425
2024 XIRP2 mutation enhances the stability of the XIRP2 protein without affecting its mRNA levels in HCC cells. Inhibition of XIRP2 increases sensitivity to oxaliplatin through elevation of zinc ions and calcium ion overload. Protein stability experiments, CCK-8 drug sensitivity assay, qRT-PCR, ion measurement in HCC cell lines Biology Low 39194571

Source papers

Stage 0 corpus · 61 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2020 Genomic landscape of metastatic breast cancer identifies preferentially dysregulated pathways and targets. The Journal of clinical investigation 95 32657779
2004 Xin repeats define a novel actin-binding motif. Journal of cell science 83 15454575
2014 Genome-wide association and pathway analysis of feed efficiency in pigs reveal candidate genes and pathways for residual feed intake. Frontiers in genetics 76 25250046
2016 Filamin C is a highly dynamic protein associated with fast repair of myofibrillar microdamage. Human molecular genetics 71 27206985
2020 EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients. Aging 64 32012118
2016 Parkinson's disease: SNCA-, PARK2-, and LRRK2- targeting microRNAs elevated in cingulate gyrus. Parkinsonism & related disorders 63 27717584
2010 Modulation of angiotensin II-mediated cardiac remodeling by the MEF2A target gene Xirp2. Circulation research 61 20093629
2013 Differential proteomic analysis of abnormal intramyoplasmic aggregates in desminopathy. Journal of proteomics 59 23639843
2010 Genome-wide association study identifies genes that may contribute to risk for developing heroin addiction. Psychiatric genetics 54 20520587
2022 Single-cell and spatial transcriptomics of the infarcted heart define the dynamic onset of the border zone in response to mechanical destabilization. Nature cardiovascular research 51 39086770
2006 Myomaxin is a novel transcriptional target of MEF2A that encodes a Xin-related alpha-actinin-interacting protein. The Journal of biological chemistry 49 17046827
2015 A short splice form of Xin-actin binding repeat containing 2 (XIRP2) lacking the Xin repeats is required for maintenance of stereocilia morphology and hearing function. The Journal of neuroscience : the official journal of the Society for Neuroscience 43 25653358
2010 Cardioprotective effects of a selective B(2) receptor agonist of bradykinin post-acute myocardial infarct. American journal of hypertension 41 20186129
2015 XIRP2, an actin-binding protein essential for inner ear hair-cell stereocilia. Cell reports 40 25772365
2006 SLC25A12 and CMYA3 gene variants are not associated with autism in the IMGSAC multiplex family sample. European journal of human genetics : EJHG 38 16205742
2021 Right versus left ventricular remodeling in heart failure due to chronic volume overload. Scientific reports 35 34429479
2018 Transcriptome Analysis of Cardiac Hypertrophic Growth in MYBPC3-Null Mice Suggests Early Responders in Hypertrophic Remodeling. Frontiers in physiology 32 30410445
2014 New insights into the roles of Xin repeat-containing proteins in cardiac development, function, and disease. International review of cell and molecular biology 32 24725425
2012 The Xin repeat-containing protein, mXinβ, initiates the maturation of the intercalated discs during postnatal heart development. Developmental biology 28 23261932
2012 Patient-specific protein aggregates in myofibrillar myopathies: laser microdissection and differential proteomics for identification of plaque components. Proteomics 26 23044792
2005 Structure, Expression, and Function of a Novel Intercalated Disc Protein, Xin. Journal of medical sciences (Taipei, Taiwan) 26 16708114
2022 Chronic isoprenaline/phenylephrine vs. exclusive isoprenaline stimulation in mice: critical contribution of alpha1-adrenoceptors to early cardiac stress responses. Basic research in cardiology 24 35286475
2018 Critical Roles of Xirp Proteins in Cardiac Conduction and Their Rare Variants Identified in Sudden Unexplained Nocturnal Death Syndrome and Brugada Syndrome in Chinese Han Population. Journal of the American Heart Association 21 29306897
2015 Identification of quantitative trait loci influencing inflammation-mediated alveolar bone loss: insights into polygenic inheritance of host-biofilm disequilibria in periodontitis. Journal of periodontal research 21 26126603
2015 Exome Sequencing Identifies Pathogenic and Modifier Mutations in a Child With Sporadic Dilated Cardiomyopathy. Journal of the American Heart Association 21 26656454
2018 The stable actin core of mechanosensory stereocilia features continuous turnover of actin cross-linkers. Molecular biology of the cell 20 29874122
2009 The candidate gene XIRP2 at a quantitative gene locus on equine chromosome 18 associated with osteochondrosis in fetlock and hock joints of South German Coldblood horses. The Journal of heredity 16 19304740
2023 Identification of copy number variation in Tibetan sheep using whole genome resequencing reveals evidence of genomic selection. BMC genomics 14 37726692
2021 Adaptive versus maladaptive cardiac remodelling in response to sustained β-adrenergic stimulation in a new 'ISO on/off model'. PloS one 14 34138844
2020 Identifying modifier genes for hypertrophic cardiomyopathy. Journal of molecular and cellular cardiology 14 32470469
2020 Transformation of Mature Osteoblasts into Bone Lining Cells and RNA Sequencing-Based Transcriptome Profiling of Mouse Bone during Mechanical Unloading. Endocrinology and metabolism (Seoul, Korea) 14 32615730
2006 A novel gene (Cmya3) induced in the heart by angiotensin II-dependent but not salt-dependent hypertension in mice. American journal of hypertension 14 16500513
2013 Intercalated disc protein, mXinα, suppresses p120-catenin-induced branching phenotype via its interactions with p120-catenin and cortactin. Archives of biochemistry and biophysics 13 23296090
2018 Genetic Variants Influencing Plasma Renin Activity in Hypertensive Patients From the PEAR Study (Pharmacogenomic Evaluation of Antihypertensive Responses). Circulation. Genomic and precision medicine 12 29650764
2023 Repair of noise-induced damage to stereocilia F-actin cores is facilitated by XIRP2 and its novel mechanosensor domain. eLife 11 37294664
2022 Methylome analysis of ALS patients and presymptomatic mutation carriers in blood cells. Neurobiology of aging 11 35537341
2018 Germline but not somatic de novo mutations are common in human congenital diaphragmatic hernia. Birth defects research 10 29570242
2016 Sarcomeric lesions and remodeling proximal to intercalated disks in overload-induced cardiac hypertrophy. Experimental cell research 10 27639425
2024 Ca2+/calmodulin-dependent kinase IIδC-induced chronic heart failure does not depend on sarcoplasmic reticulum Ca2+ leak. ESC heart failure 8 38616546
2022 A genomic mutation spectrum of collecting duct carcinoma in the Chinese population. BMC medical genomics 8 34980126
2022 RNA-Seq analysis reveals sex-dependent transcriptomic profiles of human subacromial bursa stratified by tear etiology. Journal of orthopaedic research : official publication of the Orthopaedic Research Society 8 35266580
2022 Whole exome sequencing of high-risk neuroblastoma identifies novel non-synonymous variants. PloS one 8 36037157
2021 Genome-wide analysis of the mouse LIM gene family reveals its roles in regulating pathological cardiac hypertrophy. FEBS letters 8 34328660
2024 Interleukin 11 therapy causes acute left ventricular dysfunction. Cardiovascular research 7 39383190
2022 Mutation burden analysis of six common mental disorders in African Americans by whole genome sequencing. Human molecular genetics 6 35642741
2023 Effects of Purine Metabolism-Related LINC01671 on Tumor Heterogeneity in Kidney Renal Clear Cell Carcinoma. Frontiers in bioscience (Landmark edition) 5 38179759
2018 Polymorphisms in selected genes and analysis of their relationship with osteochondrosis in Polish sport horse breeds. Animal genetics 5 30152531
2014 CCDD Phenotype Associated with a Small Chromosome 2 Deletion. Seminars in ophthalmology 4 24475916
2025 Genome-Wide Association Study of Exercise Addiction Among Elite Wrestlers. Brain sciences 3 40002435
2024 Identification of Clinical Value and Biological Effects of XIRP2 Mutation in Hepatocellular Carcinoma. Biology 3 39194571
2025 Identification of Potential Intervention Targets Involved in Prior Exercise that Attenuates Peripheral Neuropathic Pain by Integrating Transcriptome and Whole-genome Bisulfite Sequencing Analyses. Molecular neurobiology 2 39825163
2025 Whole-exome sequencing reveals the mutational landscape of head and neck lymphoepithelioma-like carcinoma. Oral oncology 1 40976151
2025 R405W Desmin Knock-In Mice Highlight Alterations of Mitochondria, Protein Quality Control and Myofibrils in Myofibrillar Myopathy. Journal of cachexia, sarcopenia and muscle 1 41165044
2024 Somatic mutations that affect early genetic progression and immune microenvironment in gastric carcinoma. Pathology, research and practice 1 38663178
2023 A Rare Case of Penoscrotal Webbing and Extensive Hernias: An Anatomical Report With Genetic Insights. Cureus 1 38021525
2026 Genomic Signatures Underlying Environmental Adaptation and Reproductive Traits in the Tibetan Pig. Animals : an open access journal from MDPI 0 41681490
2025 Early downregulation of hair cell (HC)-specific genes in the vestibular sensory epithelium during chronic ototoxicity. Journal of biomedical science 0 40908485
2025 Transcriptome analysis of postnatal mouse cardiac tissue growth and development. Yi chuan = Hereditas 0 41139466
2025 Nuclear Ca2+-Calmodulin signaling in cardiac myocytes reduces catecholamine-evoked protein translation and prevents hypertrophy. Cell calcium 0 41380480
2024 Comparative Proteomic and Phosphoproteomic Analyses Reveal Molecular Signatures of Myocardial Infarction and Transverse Aortic Constriction in Aged Mouse Models. Cardiology research and practice 0 39502510
2024 Multi-ancestry genome-wide association study reveals novel genetic signals for lung function decline. medRxiv : the preprint server for health sciences 0 39649580