Affinage

USP39

Ubiquitin carboxyl-terminal hydrolase 39 · UniProt Q53GS9

Audit flag: ungrounded claim
Length
565 aa
Mass
65.4 kDa
Annotated
2026-06-14
89 papers in source corpus

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

No mechanistic discoveries found in literature.

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
No controlled-vocabulary terms were assigned to this entry.

Source papers

Stage 0 corpus · 89 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1994 The SAD1/RAD53 protein kinase controls multiple checkpoints and DNA damage-induced transcription in yeast. Genes & development 427 7958905
1995 The product of the spindle formation gene sad1+ associates with the fission yeast spindle pole body and is essential for viability. The Journal of cell biology 360 7744953
2007 Telomere anchoring at the nuclear periphery requires the budding yeast Sad1-UNC-84 domain protein Mps3. The Journal of cell biology 155 18039933
2001 The SAD-1 kinase regulates presynaptic vesicle clustering and axon termination. Neuron 150 11182085
2021 Deubiquitinase USP39 and E3 ligase TRIM26 balance the level of ZEB1 ubiquitination and thereby determine the progression of hepatocellular carcinoma. Cell death and differentiation 135 33649471
2011 Structure of Sad1-UNC84 homology (SUN) domain defines features of molecular bridge in nuclear envelope. The Journal of biological chemistry 115 22170055
2006 The Sad1-UNC-84 homology domain in Mps3 interacts with Mps2 to connect the spindle pole body with the nuclear envelope. The Journal of cell biology 114 16923827
2024 Histone lactylation promotes malignant progression by facilitating USP39 expression to target PI3K/AKT/HIF-1α signal pathway in endometrial carcinoma. Cell death discovery 103 38459014
2008 Usp39 is essential for mitotic spindle checkpoint integrity and controls mRNA-levels of aurora B. Cell cycle (Georgetown, Tex.) 102 18728397
2003 Two-hybrid search for proteins that interact with Sad1 and Kms1, two membrane-bound components of the spindle pole body in fission yeast. Molecular genetics and genomics : MGG 89 14655046
2006 SAD-2 is required for meiotic silencing by unpaired DNA and perinuclear localization of SAD-1 RNA-directed RNA polymerase. Proceedings of the National Academy of Sciences of the United States of America 78 16461906
2019 USP39 regulates DNA damage response and chemo-radiation resistance by deubiquitinating and stabilizing CHK2. Cancer letters 60 30771428
2006 Neuronal polarity is regulated by a direct interaction between a scaffolding protein, Neurabin, and a presynaptic SAD-1 kinase in Caenorhabditis elegans. Development (Cambridge, England) 60 17151015
2023 USP39 stabilizes β-catenin by deubiquitination and suppressing E3 ligase TRIM26 pre-mRNA maturation to promote HCC progression. Cell death & disease 52 36707504
2021 Splicing factor USP39 promotes ovarian cancer malignancy through maintaining efficient splicing of oncogenic HMGA2. Cell death & disease 51 33731694
2019 RNA splicing factor USP39 promotes glioma progression by inducing TAZ mRNA maturation. Oncogene 50 31332287
2004 Human SAD1 kinase is involved in UV-induced DNA damage checkpoint function. The Journal of biological chemistry 46 15150265
2005 Validation of a cotton-specific gene, Sad1, used as an endogenous reference gene in qualitative and real-time quantitative PCR detection of transgenic cottons. Plant cell reports 44 15726375
2021 USP39 promotes tumorigenesis by stabilizing and deubiquitinating SP1 protein in hepatocellular carcinoma. Cellular signalling 43 34197957
2011 Zebrafish usp39 mutation leads to rb1 mRNA splicing defect and pituitary lineage expansion. PLoS genetics 43 21249182
2017 USP39 Deubiquitinase Is Essential for KRAS Oncogene-driven Cancer. The Journal of biological chemistry 42 28154181
2013 Lentivirus-mediated inhibition of USP39 suppresses the growth of breast cancer cells in vitro. Oncology reports 42 24126978
2017 USP39 promotes colorectal cancer growth and metastasis through the Wnt/β-catenin pathway. Oncology reports 39 28259917
2020 An NAD+-Dependent Deacetylase SIRT7 Promotes HCC Development Through Deacetylation of USP39. iScience 38 32711345
2015 USP39 promotes the growth of human hepatocellular carcinoma in vitro and in vivo. Oncology reports 38 26081192
2014 The crystal structure of S. cerevisiae Sad1, a catalytically inactive deubiquitinase that is broadly required for pre-mRNA splicing. RNA (New York, N.Y.) 36 24681967
2020 USP39 Serves as a Deubiquitinase to Stabilize STAT1 and Sustains Type I IFN-Induced Antiviral Immunity. Journal of immunology (Baltimore, Md. : 1950) 34 33127822
2022 USP39 facilitates breast cancer cell proliferation through stabilization of FOXM1. American journal of cancer research 33 36119839
2013 Sad1 counteracts Brr2-mediated dissociation of U4/U6.U5 in tri-snRNP homeostasis. Molecular and cellular biology 32 24190974
2020 Knocking down USP39 Inhibits the Growth and Metastasis of Non-Small-Cell Lung Cancer Cells through Activating the p53 Pathway. International journal of molecular sciences 31 33255748
2016 Knockdown of USP39 induces cell cycle arrest and apoptosis in melanoma. Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 31 27456357
2008 A chemical-genetic strategy reveals distinct temporal requirements for SAD-1 kinase in neuronal polarization and synapse formation. Neural development 31 18808695
2017 USP39, a direct target of microRNA-133a, promotes progression of pancreatic cancer via the AKT pathway. Biochemical and biophysical research communications 30 28286270
2021 USP39 promotes malignant proliferation and angiogenesis of renal cell carcinoma by inhibiting VEGF-A165b alternative splicing via regulating SRSF1 and SRPK1. Cancer cell international 29 34544400
2014 SAD1, an RNA polymerase I subunit A34.5 of rice, interacts with Mediator and controls various aspects of plant development. The Plant journal : for cell and molecular biology 29 25404280
2019 USP39 promotes ovarian cancer malignant phenotypes and carboplatin chemoresistance. International journal of oncology 28 31180526
2018 MiR-1281, a p53-responsive microRNA, impairs the survival of human osteosarcoma cells upon ER stress via targeting USP39. American journal of cancer research 28 30323969
2023 USP39 Regulates NF-κB-Mediated Inflammatory Responses through Deubiquitinating K48-Linked IκBα. Journal of immunology (Baltimore, Md. : 1950) 26 36651806
2021 USP39 promotes non-homologous end-joining repair by poly(ADP-ribose)-induced liquid demixing. Nucleic acids research 26 34614178
2021 USP39 mediates p21-dependent proliferation and neoplasia of colon cancer cells by regulating the p53/p21/CDC2/cyclin B1 axis. Molecular carcinogenesis 25 33634905
2015 Reduced USP39 expression inhibits malignant proliferation of medullary thyroid carcinoma in vitro. World journal of surgical oncology 25 26303214
2021 USP39 attenuates the antitumor activity of cisplatin on colon cancer cells dependent on p53. Cell biology and toxicology 24 34822033
2014 Membrane-associated proteomics of chickpea identifies Sad1/UNC-84 protein (CaSUN1), a novel component of dehydration signaling. Scientific reports 21 24577507
2023 USP39 interacts with SIRT7 to promote cervical squamous cell carcinoma by modulating autophagy and oxidative stress via FOXM1. Journal of translational medicine 20 37957720
2016 Lentivirus-mediated inhibition of USP39 suppresses the growth of gastric cancer cells via PARP activation. Molecular medicine reports 20 27175747
2019 USP39 regulates the cell cycle, survival, and growth of human leukemia cells. Bioscience reports 19 30898977
2023 Spliceosome component Usp39 contributes to hepatic lipid homeostasis through the regulation of autophagy. Nature communications 18 37923718
2015 Lentiviral vector-mediated doxycycline-inducible USP39 shRNA or cDNA expression in triple-negative breast cancer cells. Oncology reports 18 25812575
2022 DNAAF5 promotes hepatocellular carcinoma malignant progression by recruiting USP39 to improve PFKL protein stability. Frontiers in oncology 17 36276075
2022 The spliceosome component Usp39 controls B cell development by regulating immunoglobulin gene rearrangement. Cell reports 16 35139388
2018 Sad1 Spatiotemporally Regulates Kinetochore Clustering To Ensure High-Fidelity Chromosome Segregation in the Human Fungal Pathogen Cryptococcus neoformans. mSphere 16 29976642
2023 USP39-mediated deubiquitination of Cyclin B1 promotes tumor cell proliferation and glioma progression. Translational oncology 15 37302347
2021 The Deubiquitinase USP39 Promotes ESCC Tumorigenesis Through Pre-mRNA Splicing of the mTORC2 Component Rictor. Frontiers in oncology 15 34123832
2019 Exome sequencing study of Russian breast cancer patients suggests a predisposing role for USP39. Breast cancer research and treatment 15 31754952
2017 USP39 regulates the growth of SMMC-7721 cells via FoxM1. Experimental and therapeutic medicine 15 28413501
2010 SunB, a novel Sad1 and UNC-84 domain-containing protein required for development of Dictyostelium discoideum. Development, growth & differentiation 14 20887559
2022 The Deubiquitinase USP39 Promotes Esophageal Squamous Cell Carcinoma Malignancy as a Splicing Factor. Genes 13 35627203
2023 SAD-1 kinase controls presynaptic phase separation by relieving SYD-2/Liprin-α autoinhibition. PLoS biology 12 38048304
2016 Knockdown of USP39 by lentivirus-mediated RNA interference suppresses the growth of oral squamous cell carcinoma. Cancer biomarkers : section A of Disease markers 12 26835714
2023 Deubiquitinase USP39 promotes SARS-CoV-2 replication by deubiquitinating and stabilizing the envelope protein. Antiviral research 11 38158131
2022 miR-381 Inhibits Proliferation and Invasion of Non-Small-Cell Cancer Cells by Targeting USP39. Disease markers 11 36046375
2024 Deubiquitinating enzyme USP39 promotes the growth and metastasis of gastric cancer cells by modulating the degradation of RNA-binding protein RBM39. The Journal of biological chemistry 10 39260689
2022 USP39 is essential for mammalian epithelial morphogenesis through upregulation of planar cell polarity components. Communications biology 10 35440748
2025 USP39 phase separates into the nucleolus and drives lung adenocarcinoma progression by promoting GLI1 expression. Cell communication and signaling : CCS 6 39885503
2024 Disrupting USP39 deubiquitinase function impairs the survival and migration of multiple myeloma cells through ZEB1 degradation. Journal of experimental & clinical cancer research : CR 6 39736693
2020 Elevated Sad1 and UNC84 Domain Containing 2 (SUN2) level inhibits cell growth and aerobic glycolysis in oral cancer through reducing the expressions of glucose transporter 1 (GLUT1) and lactate dehydrogenase A (LDHA). Journal of dental sciences 6 33384835
2010 The long and the short of SAD-1 kinase. Communicative & integrative biology 5 20714407
2025 Toosendanin promotes prostate cancer cell apoptosis, ferroptosis and M1 polarization via USP39-mediated PLK1 deubiquitination. Naunyn-Schmiedeberg's archives of pharmacology 4 40056202
2024 USP39 Promotes the Viability and Migration of Head and Neck Squamous Cell Carcinoma Cell by Regulating STAT1. Technology in cancer research & treatment 4 38706215
2024 USP39 regulates pyruvate handling in non-small cell lung cancer. Cell death discovery 4 39695108
2023 USP39-Mediated Non-Proteolytic Control of ETS2 Suppresses Nuclear Localization and Activity. Biomolecules 4 37892157
2025 USP39 promote post-translational modifiers to stimulate the progress of cancer. Discover oncology 3 40358671
2024 The SUN-family protein Sad1 mediates heterochromatin spatial organization through interaction with histone H2A-H2B. Nature communications 3 38773107
2025 Targeting the Spliceosomal Protein USP39 Through Allosteric Ligands and PROTAC-Induced Degradation. Angewandte Chemie (International ed. in English) 2 41423877
2018 Loop-Mediated Isothermal Amplification for Detection of Endogenous Sad1 Gene in Cotton: An Internal Control for Rapid Onsite GMO Testing. Journal of AOAC International 2 29678222
2026 USP39 inhibits MLKL phosphorylation and deubiquitination to suppress necroptosis of nucleus pulposus cells and attenuate intervertebral disc degeneration. Journal of orthopaedic translation 1 41836548
2025 USP39/SMC4 promotes hepatoma cell proliferation and 5-FU resistance. Scientific reports 1 40087331
2025 MYC-Driven Activation of USP39 Enhances SRSF1 Stability and Promotes PDAC Progression. bioRxiv : the preprint server for biology 1 40909523
2026 Dual roles of USP39 in stabilizing PB2 and orchestrating ribonucleoprotein assembly drive H5 influenza virus replication and pathogenicity. Cell reports 0 41712380
2026 USP39 deubiquitinase: Dual roles in RNA splicing and protein stabilization in cancer therapeutics. International journal of biological macromolecules 0 41903639
2026 USP39 promotes antiviral defense through post-transcriptional control of RIG-I and stabilization of STING. PLoS biology 0 42113893
2026 USP39 reduces BRCA1 methylation to promote mitochondrial biogenesis and lower drug sensitivity in ovarian cancer through deubiquitinating ZC3H18. 3 Biotech 0 42205906
2025 USP39 promotes retinal pathological angiogenesis in retinopathy of prematurity by stabilizing SIRT2 expression through deubiquitination. International ophthalmology 0 39853525
2025 Exploring the cancerous nexus: the pivotal and diverse roles of USP39 in cancer development. Discover oncology 0 40347416
2025 USP39 Depletion Plays Repressive Roles in Laryngeal Squamous Cell Carcinoma Development. Cell biology international 0 40405439
2025 USP39 at the crossroads of cancer immunity: regulating immune evasion and immunotherapy response through RNA splicing and ubiquitin signaling. Frontiers in immunology 0 40990019
2025 Astaxanthin inhibits hepatocellular carcinoma by targeting USP39-mediated β-catenin stabilization through deubiquitination. Scientific reports 0 41238805
2023 SAD-1 kinase controls presynaptic phase separation by relieving SYD-2/Liprin-α autoinhibition. bioRxiv : the preprint server for biology 0 37398223
2013 Preliminary crystallographic analysis of the kinase domain of SAD-1, a protein essential for presynaptic differentiation in Caenorhabditis elegans. Acta crystallographica. Section F, Structural biology and crystallization communications 0 23545657

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