| 2008 |
USP30 is a deubiquitinating enzyme embedded in the mitochondrial outer membrane; its depletion by RNAi induces elongated, interconnected mitochondria dependent on mitofusin activity, and this phenotype is rescued by catalytically active USP30, establishing USP30 as a regulator of mitochondrial morphology via deubiquitination. |
RNAi knockdown, ectopic re-expression with catalytic mutants, live-cell imaging of mitochondrial morphology, fractionation to mitochondrial outer membrane |
Molecular biology of the cell |
High |
18287522
|
| 2014 |
USP30 opposes PINK1/Parkin-mediated mitophagy by removing ubiquitin from Parkin substrates on damaged mitochondria; overexpression of USP30 blocks mitophagy, while USP30 knockdown enhances mitochondrial degradation. Global ubiquitination-site profiling identified multiple mitochondrial substrates oppositely regulated by Parkin and USP30. Knockdown of USP30 in Drosophila dopaminergic neurons rescues defects caused by parkin/PINK1 loss. |
Overexpression and RNAi knockdown, ubiquitination site profiling by mass spectrometry, mitophagy assays, Drosophila genetic rescue |
Nature |
High |
24896179
|
| 2014 |
USP30 is a target of the mitochondrial fusion-inducing compound 15-oxospiramilactone (S3); its inhibition leads to non-degradative ubiquitination of Mfn1/2, which enhances mitofusin activity and promotes mitochondrial fusion, revealing a role for USP30 in regulating Mfn1/2 ubiquitination status. |
Chemical inhibition with S3, ubiquitination assays of Mfn1/2, mitochondrial morphology imaging, target identification |
Cell research |
Medium |
24513856
|
| 2015 |
USP30 opposes Parkin-dependent ubiquitylation of TOM20 on mitochondria; its depletion enhances depolarization-induced apoptotic cell death in Parkin-overexpressing cells and also sensitizes cancer cells to BH3-mimetics by regulating BAX/BAK-dependent apoptosis. |
USP30 depletion/overexpression, co-IP of TOM20 ubiquitylation, apoptosis assays with BH3-mimetics |
EMBO reports |
High |
25739811
|
| 2017 |
Crystal structures of human USP30 bound to monoubiquitin and Lys6-linked diubiquitin reveal unique ubiquitin-binding interfaces that explain USP30's Lys6-linkage preference. Distally phosphorylated ubiquitin chains (pSer65-Ub) impair USP30 activity. USP30 regulates Lys6-polyubiquitinated TOM20. Active-site architecture and regulation by PINK1-phospho-ubiquitin were established. |
X-ray crystallography, in vitro ubiquitin chain cleavage assays, linkage-specific affimers, mutagenesis, biochemical reconstitution |
Nature structural & molecular biology |
High |
28945249
|
| 2018 |
GNPAT recruits USP30 to deubiquitylate and stabilize DRP1, thereby facilitating mitochondrial fission and lipid metabolism in hepatocellular carcinoma; USP30 interaction with DRP1 was demonstrated by co-IP. |
Co-immunoprecipitation, ubiquitination assays, knockdown/overexpression, mitochondrial morphology analysis |
Cancer research |
Medium |
30143522
|
| 2018 |
USP30 acts upstream of PINK1 to regulate basal mitophagy in Parkin-null cells by modulating PINK1-substrate availability; additionally, a fraction of endogenous USP30 localizes to peroxisomes where it regulates basal pexophagy in a PINK1- and Parkin-independent manner. |
Mitophagy reporter assays, USP30 depletion, subcellular fractionation/immunofluorescence for peroxisomal localization, pexophagy reporters |
EMBO reports |
High |
29895712
|
| 2019 |
USP30 localizes to peroxisomes and counteracts the peroxisomal E3 ubiquitin ligase PEX2 to prevent pexophagy; overexpression of USP30 blocks amino acid starvation-induced pexophagy and its depletion induces basal pexophagy. |
Live-cell imaging, subcellular fractionation, overexpression and knockdown of USP30, pexophagy flux assays, genetic interaction with PEX2 |
The Journal of cell biology |
High |
30700497
|
| 2020 |
In induced neurons (iNeurons) under endogenous expression conditions, USP30 loss preferentially affects ubiquitylation of mitochondrial translocon (TOM complex) components; USP30 sets a trigger threshold for PINK1-Parkin amplification of mitochondrial ubiquitylation and also has a basal quality-control function on ubiquitylated translocon import substrates. |
Quantitative proteomics/ubiquitylomics in USP30−/− iNeurons, mitophagy flux assays, CRISPR knockout |
Molecular cell |
High |
32142685
|
| 2020 |
USP30 deubiquitylation of TOM complex components (including TOM20) dampens the trigger for Parkin-dependent amplification of mitochondrial ubiquitylation leading to mitophagy; TOM20 ubiquitylation is a robust biomarker for USP30 loss or inhibition, and pSer65-Ub proceeds more rapidly in USP30-inhibited cells. |
Proteomics comparing USP30 KO vs. chemical inhibition (FT3967385), ubiquitylation profiling in neuroblastoma cells, biochemical assays |
Life science alliance |
High |
32636217
|
| 2020 |
Noncanonical tryptophan analogues incorporated at W475 in USP30 alter its activity and diubiquitin linkage selectivity; the formyl-indole analogue at W475 enhances polar interactions and USP30 activity, while 3-benzothienyl-l-alanine induces unique K6-specificity, demonstrating the role of W475 in diubiquitin selectivity at the active site. |
Genetic code expansion with evolved PylRS, noncanonical amino acid incorporation, in vitro ubiquitin cleavage assays, X-ray crystallography of PylRS-analogue complexes |
Biochemistry |
Medium |
32484330
|
| 2021 |
USP30 deubiquitylates NLRP3 inflammasome components, activating the NLRP3 inflammasome; this interaction was demonstrated by co-immunoprecipitation and ubiquitination assays, and USP30 inhibition (MF-094) reduced NLRP3 and caspase-1 activation in diabetic wound models. |
Co-immunoprecipitation, ubiquitination assays, shRNA knockdown, USP30 inhibitor MF-094 in vitro and in vivo |
Experimental cell research |
Medium |
34883112
|
| 2021 |
USP30 inhibition in a SAH model promotes ubiquitination of MFN2 by Parkin, separating damaged mitochondria from the healthy network and promoting mitophagy; USP30 opposes MFN2 ubiquitination and thereby inhibits mitophagy. |
In vitro (hemoglobin exposure model) and in vivo (intravascular perforation) SAH models, ubiquitination assays of MFN2, USP30 inhibitor MF094 |
Translational stroke research |
Medium |
38147294
|
| 2021 |
USP30 overexpression suppresses mitochondrial fragmentation and degradation of MFN2 under oxygen-glucose deprivation/reperfusion injury by preventing ubiquitination of MFN2; overexpression of MFN2 itself attenuates mitochondrial fragmentation. |
OGD/reperfusion cell model, USP30 overexpression, ubiquitination assays of MFN2, mitochondrial morphology analysis |
Aging |
Medium |
33609088
|
| 2021 |
USP30 promotes Bax-dependent apoptosis by deubiquitinating and reducing mitochondrial accumulation of Bax; the gold compound aumdubin shows high affinity for USP30 and induces apoptosis by increasing Bax ubiquitination and mitochondrial localization through USP30 inhibition. |
Affinity binding assays, ubiquitination assays of Bax, apoptosis assays, USP30 inhibition by aumdubin |
Cell death discovery |
Medium |
34381024
|
| 2022 |
A peptide (Q14) derived from the transmembrane domain of USP30 inhibits USP30 through a novel autoinhibitory mechanism by binding to potential allosteric sites on USP30 and separately promotes autophagosome formation via its LC3-interacting region (LIR) motif. |
Fluorescence polarization, microscale thermophoresis, in vitro USP30 activity assays (Ub-AMC), autophagy reporter assays, LC3 binding assay |
Autophagy |
Medium |
34989313
|
| 2022 |
USP30 regulates AKT/mTOR signaling downstream of mitochondrial stress: Parkin inhibits AKT/mTOR to promote apoptosis following mitochondrial stress, while USP30 overexpression antagonizes Parkin activity to sustain AKT/mTOR signaling and inhibit apoptosis. |
Genetic overexpression/knockdown of Parkin and USP30, AKT/mTOR pathway phosphorylation assays, apoptosis assays under mitochondrial stress |
Frontiers in pharmacology |
Medium |
35250566
|
| 2023 |
USP30 interacts with and stabilizes Snail protein through deubiquitination, specifically removing K48-linked polyubiquitin chains, thereby promoting Snail-driven EMT in breast cancer cells. |
Co-immunoprecipitation, ubiquitination assays (K48-linkage specific), knockdown/overexpression, EMT and invasion assays |
Cancer gene therapy |
Medium |
38146008
|
| 2023 |
USP30 knockout in mice protects dopaminergic neurons against α-synuclein-induced neurodegeneration; loss of USP30 increases mitophagy and decreases phospho-S129 α-synuclein and SN dopaminergic neuronal loss, recapitulated by a brain-penetrant USP30 inhibitor MTX115325. |
Usp30 knockout mice, α-synuclein overexpression PD model, behavioral assays, immunohistochemistry, pharmacological inhibition with MTX115325 |
Nature communications |
High |
37957154
|
| 2023 |
CDK5 phosphorylates USP30 at serine 216 to stabilize USP30 protein; stabilized USP30 then suppresses mitophagy and activates MAVS-mediated neuroinflammation in an MPTP/MPP+ PD model. CDK5 inhibition reduces USP30 levels and suppresses MAVS pathway activation. |
CDK5 inhibition, phosphorylation assays, USP30 knockdown, mitophagy assays, MAVS inflammation pathway analysis in microglial cells and in vivo MPTP model |
Ecotoxicology and environmental safety |
Medium |
38772138
|
| 2024 |
NPRC recruits USP30 to deubiquitinate C/EBPβ at K149 via K48-linked polyubiquitin removal; the DNA-binding domain of C/EBPβ interacts with USP30, and NPRC's ANPR region binds USP30 to facilitate this deubiquitination, stabilizing C/EBPβ and promoting lipid accumulation. |
Proteomic analysis, ubiquitination assays (K149 site-specific), co-immunoprecipitation, domain mapping |
Metabolism: clinical and experimental |
Medium |
39433172
|
| 2024 |
USP30 deubiquitinates TOMM40 to reduce its ubiquitination level and stabilize it; USP30 binds TOMM40 (demonstrated by co-IP) and promotes breast cancer cell proliferation and tamoxifen resistance through this mechanism. |
Co-immunoprecipitation, ubiquitination assays, knockdown/overexpression, tamoxifen resistance assays |
Journal of biochemical and molecular toxicology |
Medium |
40227042
|
| 2024 |
FOXF1 induces HMGA2 transcription, and HMGA2 recruits USP30 (demonstrated by co-IP and mass spectrometry) to deubiquitinate and stabilize S100A6, promoting ovarian cancer metastasis. |
Co-immunoprecipitation, mass spectrometry, chromatin immunoprecipitation, luciferase assays, functional rescue experiments |
Biochimica et biophysica acta. Molecular basis of disease |
Medium |
39694080
|
| 2025 |
Crystal structure of human USP30 in complex with a specific small-molecule inhibitor (enabled by chimeric protein engineering) reveals that the inhibitor binds a cryptic pocket formed by a compound-induced conformation of the USP30 switching loop; a common ligandability hotspot at the Leu73 ubiquitin-binding site underlies specific USP30 inhibition. |
X-ray crystallography of chimeric USP30-inhibitor complex, structure-activity relationship analysis, enzymatic assays |
Nature structural & molecular biology |
High |
40325251
|
| 2025 |
USP30 depletion stabilizes and reduces MAT2A protein through a deubiquitination-dependent mechanism, lowering SAM levels (~40%), reducing global DNA methylation (~35%), and upregulating miR-30a-5p, which suppresses MDM2 and NFAT5 to maintain endothelial cell function; this is a mitophagy-independent role for USP30. |
EC-specific USP30 knockout mice, lung injury models, proteomics, methylation assays, miRNA profiling, biochemical ubiquitination assays |
Advanced science |
Medium |
41104980
|
| 2025 |
Prolonged antigen stimulation drives TCR/NFAT1 signaling to transcriptionally upregulate USP30 in exhausted CD8+ T cells; USP30 genetic deletion or pharmacological inhibition restores mitophagy, improves mitochondrial fitness, and rejuvenates CD8+ T cell effector functions and antitumor responses. |
Genetic deletion and pharmacological inhibition of USP30, TCR/NFAT1 pathway analysis, mitophagy flux assays, T cell functional assays, in vivo tumor models |
Science advances |
Medium |
40815646
|
| 2026 |
USP30 binds serine/glycine and senses their levels; it protects FTO from proteasomal degradation through deubiquitination. Stabilized FTO demethylates PHGDH and PSAT1 mRNAs in an m6A-YTHDF2-dependent manner, promoting serine synthesis and colorectal cancer growth. |
Co-immunoprecipitation, ubiquitination assays, m6A profiling, metabolomics, genetic knockdown/overexpression, in vivo tumor models |
Cell death and differentiation |
Medium |
41652187
|
| 2026 |
USP30 interacts with and deubiquitinates HK1 and HK2 by removing atypical ubiquitin chains, enhancing their stability, mitochondrial localization, VDAC1 binding, and hexokinase activity; K144 of HK2 is a critical regulatory site for USP30-mediated deubiquitination, and its mutation enhances glycolysis and tumor growth. |
Quantitative proteomics, ubiquitinomics, co-immunoprecipitation, site-directed mutagenesis (K144), in vitro hexokinase activity assays, in vivo tumor models |
Cell death & disease |
Medium |
41688443
|
| 2026 |
USP30 overexpression stabilizes MFN2 through deubiquitination, reducing ubiquitination of MFN2 and protecting mitochondria-associated ER membranes (MAMs); knockdown of MFN2 abrogates the protective effect of USP30 on MAMs in intestinal ischemia-reperfusion injury. |
Overexpression and knockdown of USP30 and MFN2, ubiquitination assays, electron microscopy, MAM analysis, intestinal I/R model |
Biochemical pharmacology |
Medium |
41765114
|
| 2025 |
USP30 loss or inhibition alters mitochondrial morphology and increases mitochondrial membrane potential and ATP levels with decreased oxygen consumption in a PINK1/Parkin-independent manner; chronic USP30 inhibition does not impair dopaminergic neuronal activity in iPSC-derived neurons. |
CRISPRn KO, CRISPRi knockdown, pharmacological inhibition, mitochondrial morphology imaging, electrophysiology in iPSC-derived dopaminergic neurons, mitophagy reporters |
bioRxivpreprint |
Medium |
bio_10.1101_2025.02.03.636341
|
| 2024 |
LETM1 was identified as a novel USP30 substrate using proximity-labeling (APEX2) combined with ubiquitination enrichment (K-ε-GG); previously described USP30 substrates TOMM20 and FKBP8 were also confirmed in the proximity-ubiquitome upon USP30 inhibition. |
APEX2 proximity labeling, diGly ubiquitinomics by mass spectrometry, USP30 inhibition |
bioRxivpreprint |
Low |
bio_10.1101_2024.10.07.616967
|