| 2003 |
UBR2 is an E3 ubiquitin ligase of the mammalian N-end rule pathway with substrate-binding properties highly similar to UBR1, recognizing proteins with destabilizing N-terminal residues. UBR2-deficient male mice show spermatocyte arrest between leptotene/zygotene and pachytene with absence of intact synaptonemal complexes and subsequent apoptosis, establishing a required role in male meiosis. |
Knockout mouse construction, substrate-binding assays, histological analysis of testes |
Molecular and cellular biology |
High |
14585983
|
| 2004 |
RECQL4 (mutated in Rothmund-Thomson syndrome) forms a stable complex with UBR1 and UBR2 isolated from HeLa cells. The UBR1/2-bound RECQL4 was not ubiquitylated in vivo and was a long-lived protein; the isolated complex had DNA-stimulated ATPase activity. |
Co-immunoprecipitation with anti-RECQL4 antibodies from HeLa cell extracts, in vivo ubiquitylation assay, ATPase activity assay |
Human molecular genetics |
Medium |
15317757
|
| 2004 |
Yeast Ubr2 ubiquitin ligase mediates ubiquitin-dependent degradation of Rpn4 (a transcriptional activator of proteasome genes) via the ubiquitin-conjugating enzyme Rad6, which directly interacts with Ubr2. Rpn4 was validated as the first physiological substrate of Ubr2 through in vivo and in vitro ubiquitination assays. |
In vivo and in vitro ubiquitination assays, genetic deletion, protein stability assays, synthetic growth defect analysis |
The Journal of biological chemistry |
High |
15504724
|
| 2006 |
UBR1 and UBR2 double-knockout mouse embryos die at midgestation with defects in neurogenesis and cardiovascular development, including reduced proliferation and precocious migration/differentiation of neural progenitor cells; altered expression of D-type cyclins and Notch1 was observed, indicating partially divergent functions between UBR1 and UBR2. |
Double-knockout mouse construction, histological and molecular analysis of embryos |
Proceedings of the National Academy of Sciences of the United States of America |
High |
16606826
|
| 2006 |
UBR2-deficient mouse fibroblasts display chromosome fragility, chromosomal bridges, micronuclei, spontaneous chromosomal gaps, hypersensitivity to mitomycin C, and are significantly impaired in homologous recombination repair of double-strand breaks (but show normal non-homologous end joining), establishing a role for UBR2 in maintaining genome integrity via HR repair. |
Metaphase chromosome spreads, reporter assay for HR and NHEJ, mitomycin C sensitivity assay, UBR2-/- fibroblast cell lines |
Mutation research |
High |
16488448
|
| 2010 |
UBR2 localizes to meiotic chromatin regions including unsynapsed axial elements and mediates transcriptional silencing by ubiquitinating histone H2A. UBR2 interacts with ubiquitin-conjugating enzyme HR6B, promotes HR6B–H2A interaction and ubiquitin transfer to H2A. UBR2-deficient spermatocytes fail to ubiquitinate H2A and fail to silence genes on unsynapsed X and Y chromosomes. |
Chromatin immunofluorescence, Co-immunoprecipitation (UBR2–HR6B, UBR2–H2A), in vitro ubiquitination assay, analysis of UBR2-/- spermatocytes |
Proceedings of the National Academy of Sciences of the United States of America |
High |
20080676
|
| 2010 |
Saccharomyces cerevisiae Ubr1 and Ubr2 ubiquitin ligases promote degradation of unfolded/misfolded cytosolic polypeptides as part of a cytosolic protein quality control pathway. Ubr1 directly interacts with denatured substrates (not native protein), and Hsp70 stimulates polyubiquitination. Loss of Ubr1/Ubr2 suppresses growth arrest from chaperone mutation. |
Purified in vitro ubiquitination assay with denatured luciferase, genetic suppressor analysis (double mutant), yeast genetics |
Molecular biology of the cell |
High |
20462952
|
| 2010 |
Ubr2 forms a stable protein complex with Tex19.1 (a germ cell-specific protein) in mouse testes. In Ubr2-deficient germ cells, Tex19.1 protein is absent despite normal Tex19.1 transcription, indicating that Ubr2 binding metabolically stabilizes Tex19.1, a function distinct from the conventional N-end rule proteolytic role. |
Co-immunoprecipitation from mouse testes, Western blot in Ubr2-/- germ cells, RT-PCR |
PloS one |
Medium |
21103378
|
| 2010 |
UBR1 and UBR2 are leucine-binding proteins (identified via leucine-immobilized affinity beads). Leucine binds to the substrate-recognition domain of UBR2 and inhibits degradation of N-end rule substrates in vitro. Overexpression of UBR1/UBR2 reduces mTOR-dependent S6K1 phosphorylation, while knockdown increases S6K1 phosphorylation in amino acid-starved cells, identifying UBR1/UBR2 as negative regulators of the leucine-mTOR signaling pathway. |
Leucine-affinity pulldown, in vitro N-end rule substrate degradation assay, overexpression and siRNA knockdown with S6K1 phosphorylation readout |
Genes to cells : devoted to molecular & cellular mechanisms |
Medium |
20298436
|
| 2012 |
UBR2 functions as a scaffold E3 that promotes HR6B/UbcH2-dependent monoubiquitylation of H2A and H2B (but not H3 or H4) through a mechanism distinct from typical polyubiquitylation. The E3 activity of UBR2 in histone ubiquitylation is allosterically activated by dipeptides bearing destabilizing N-terminal residues. UBR2-deficient spermatocytes show defects in DSB repair and undergo pachytene arrest. UBR2-deficient somatic cells show chromosomal instability and hypersensitivity to DNA damage. |
In vitro ubiquitylation assay with histone substrates, dipeptide allosteric activation assay, analysis of UBR2-/- cells (meiotic and somatic), chromosome spread analysis |
PloS one |
High |
22616001
|
| 2013 |
Tumor cell-induced upregulation of UBR2 in muscle is mediated by p38β MAPK-dependent phosphorylation of C/EBPβ at Thr-188, which enables C/EBPβ binding to a functional responsive element in the UBR2 promoter. Genetic gain/loss-of-function confirmed p38β is sufficient and necessary for UBR2 upregulation; genetic ablation of C/EBPβ blocked UBR2 upregulation in tumor-bearing mice. |
Pharmacological inhibitor (SB202190), genetic gain/loss-of-function in C2C12 myotubes, luciferase reporter assay, ChIP-implied C/EBPβ binding, in vivo tumor-bearing mouse model |
FASEB journal |
High |
23568773
|
| 2013 |
Budding yeast Mub1/Ubr2 ubiquitin ligase complex associates with kinetochore particles through CENP-C (Mif2) and regulates the levels of the outer kinetochore protein Dsn1 via ubiquitylation. Deletion of Mub1/Ubr2 restores levels and viability of a mutant Dsn1 protein, identifying a kinetochore quality control mechanism. |
Kinetochore particle purification, Co-IP, genetic deletion, protein level analysis in yeast |
PLoS genetics |
Medium |
23408894
|
| 2019 |
UBR2 is required for NLRP1B inflammasome activation by anthrax lethal toxin (LT). LT cleaves NLRP1B after Lys44, generating a fragment with N-terminal leucine that is targeted by UBR2-mediated ubiquitination and degradation, partnering with E2 enzyme UBE2O. This degradation releases the noncovalently-bound C-terminal CARD domain for caspase-1 activation. |
Genome-wide siRNA screen, CRISPR-Cas9 KO screen, dual-fluorescence reporter system for ASC speck formation and pyroptosis, biochemical ubiquitination assays |
The EMBO journal |
High |
31268597
|
| 2020 |
UBR2 protects cells from caspase-independent cell death (CICD) via the MAPK/Erk pathway. UBR2 downregulation sensitizes cells to CICD while overexpression is protective; this protection is mediated through Erk signaling. |
Genome-wide siRNA lethality screen, UBR2 KD/overexpression, pharmacological and genetic manipulation of MAPK/Erk pathway |
Cell death & disease |
Medium |
33288741
|
| 2023 |
UBR1 and UBR2 are key sensors in the ER stress response in mammalian cells. Under normal conditions, UBR1 and UBR2 are polyubiquitinated via Lys48-linked chains and degraded by the 26S proteasome. Under ER stress, UBR1 and UBR2 are stabilized as an adaptive response. Cells lacking both UBR1 and UBR2 are hypersensitive to ER stress-induced apoptosis. |
UBR1/UBR2 double knockout cell analysis, ubiquitination linkage analysis (Lys48), protein stability assays under ER stress, apoptosis assays |
Molecules and cells |
Medium |
38376480
|
| 2024 |
DUSP22 phosphatase inhibits UBR2 by dephosphorylating it at specific serine residues, leading to ubiquitin-mediated UBR2 degradation (via the SCF E3 complex via Lys48-linked ubiquitination). UBR2 induces Lys63-linked ubiquitination of Lck at Lys99 and Lys276, followed by Lck Tyr394 phosphorylation and activation during TCR signaling. Knockout of UBR2 attenuates inflammatory phenotypes caused by DUSP22 deletion. |
Co-IP (UBR2-Lck interaction), site-directed mapping of ubiquitination (K99, K276) and phosphorylation sites (Ser on UBR2), CRISPR KO of UBR2 in mouse T cells, single-cell RNA sequencing, SLE patient peripheral blood T cell analysis |
Nature communications |
High |
38225265
|
| 2017 |
UBR2 promotes gastric cancer cell proliferation, migration, and stemness gene expression via the Wnt/β-catenin pathway. Knockdown of UBR2 in MFC cells decreased expression of β-catenin and its downstream targets (CD44, CyclinD1, CyclinD3, C-myc); additional depletion of UBR2 on top of β-catenin depletion showed no further effect on stemness genes, placing UBR2 upstream of β-catenin. |
shRNA knockdown of UBR2, Western blot for β-catenin pathway components, epistasis analysis (UBR2 KD + β-catenin depletion), exosome internalization assays |
Stem cells (Dayton, Ohio) |
Medium |
28895255
|
| 2025 |
Acetaldehyde treatment of C2C12 myotubes increases UBR2 expression and ubiquitination, and siRNA knockdown of UBR2 prevents acetaldehyde-induced myotube atrophy, establishing a direct role for UBR2 in alcohol-induced type II fast-twitch muscle fiber atrophy. |
siRNA knockdown of UBR2 in C2C12 myotubes, acetaldehyde treatment, myotube diameter measurement, ubiquitination assay |
Alcohol, clinical & experimental research |
Medium |
40511880
|