| 2000 |
Crystal structure of c-Cbl (RING E3) bound to UbcH7 (UBE2L3) reveals that the RING domain recruits the E2 and positions it optimally for ubiquitin transfer; a conserved surface channel leads from the substrate peptide to the E2 active site, suggesting RING E3s act as scaffolds. |
X-ray crystallography with functional validation |
Cell |
High |
10966114
|
| 1999 |
Crystal structure of the E6AP HECT domain bound to UbcH7 (UBE2L3) reveals determinants of E2-E3 specificity and the mechanism of ubiquitin transfer from E2 to E3 via a thioester intermediate in the catalytic cleft. |
X-ray crystallography |
Science |
High |
10558980
|
| 2011 |
UBE2L3 (UBCH7) lacks intrinsic lysine reactivity (unlike many E2s that function with RING E3s), explaining its preference for HECT-type E3s. RBR E3s (parkin, HHARI) function as RING/HECT hybrids: they bind E2s via RING1 but transfer Ub through an obligate thioester at a conserved RING2 cysteine, and UBE2L3 is the cognate E2 for this class. |
In vitro ubiquitination assays, mutagenesis, structural comparisons |
Nature |
High |
21532592
|
| 1999 |
The c-Cbl RING finger domain directly interacts with UbcH7 (UBE2L3), and together they synergistically promote ligand-induced ubiquitination of the EGFR; oncogenic 70Z-Cbl (lacking part of the RING finger) fails to bind UbcH7 and blocks EGFR ubiquitination. |
Yeast two-hybrid, in vitro binding assay, in vivo and in vitro ubiquitination assays |
The Journal of biological chemistry |
High |
10531381
|
| 1996 |
UBE2L3 encodes an E2 ubiquitin-conjugating enzyme (UbcH7) that interacts with the HECT E3 E6-AP and efficiently substitutes for UbcH5 in E6-AP-dependent ubiquitination of p53; UbcH7 can also interact with E6-AP to participate in NF-κB maturation and c-Fos degradation. |
Biochemical interaction assays, in vitro ubiquitination assays |
The Journal of biological chemistry |
High |
8576257
|
| 1998 |
UBE2L3 (UbcH7) interacts preferentially with a subset of HECT E3s (those sharing E6-AP-like specificity) but not others (e.g., RSP5), demonstrating that different HECT E3s are grouped into at least two classes based on their E2 specificity. |
In vitro binding and ubiquitin thioester formation assays with multiple HECT E3s |
The Journal of biological chemistry |
High |
9575161
|
| 1999 |
UBE2L3 (UbcH7) interacts with RBR-containing proteins HHARI and H7-AP1 through their N-terminal RING finger (HHARI) and IBR domains; this interaction is specific to UbcH7/UbcH8 and not seen with UbcH5 or UbcH1, linking RBR proteins to the ubiquitin pathway via UBE2L3. |
Yeast two-hybrid screen, in vitro binding assays |
The Journal of biological chemistry |
Medium |
10521492
|
| 2001 |
HHARI co-localizes with UbcH7 (UBE2L3) in mammalian cells, particularly in the perinuclear region; a minimal interaction region (residues 186-254) was defined, and the distance between RING1 and IBR domains is critical; mutation of RING1 from RING-HC to RING-H2 type abolishes UbcH7 interaction. |
Co-immunoprecipitation, co-localization (immunofluorescence), mutagenesis |
The Journal of biological chemistry |
Medium |
11278816
|
| 2004 |
UbcH7 (UBE2L3) is the specific E2 for ubiquitination of HPV E7 oncoprotein; E7 interacts with the SCF complex (Cul1/Skp2) E3 ligase, and can be ubiquitinated by the Cul1-containing ligase in vitro; E7 half-life is longer in Skp2-/- MEFs. |
In vitro ubiquitination assay, co-immunoprecipitation, Skp2 knockout MEFs |
Journal of virology |
High |
15113913
|
| 2004 |
UbcH7 (UBE2L3) acts as a coactivator for steroid hormone receptors (PR, GR, AR, RAR) in a hormone-dependent manner; its ubiquitin conjugation activity is required for coactivation; UbcH7 is recruited to ER- and PR-responsive promoters and cooperates with E6-AP and SRC-1 to potentiate transactivation. |
Transient transfection reporter assays, siRNA knockdown, chromatin immunoprecipitation (ChIP), Co-IP |
Molecular and cellular biology |
High |
15367689
|
| 2006 |
UbcH7 (UBE2L3) physically interacts with the glucocorticoid receptor (GR) and promotes its ubiquitination and proteasome-dependent degradation; a catalytically inactive UbcH7 dominant negative (C89S) fails to repress GR transactivation and stabilizes GR protein, demonstrating that UbcH7 enzymatic activity mediates GR turnover. |
Co-immunoprecipitation, dominant-negative mutagenesis, reporter assays, proteasome inhibitor experiments |
The Journal of endocrinology |
Medium |
17003263
|
| 2014 |
UbcH7 (UBE2L3) regulates steady-state and replicative stress-induced ubiquitination and proteasomal degradation of 53BP1; depletion of UbcH7 stabilizes 53BP1, inhibits DSB end resection, increases NHEJ, and reduces homologous recombination, making cells sensitive to DNA damage. |
shRNA screen, knockdown/depletion, ubiquitination assays, DSB repair pathway assays |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
25422456
|
| 2014 |
UBE2N, UBE2L3, and UBE2D2/3 are required synergistically for Parkin-dependent mitophagy; UBE2L3 knockdown reduces autophagic clearance of depolarized mitochondria without interfering with PINK1 stabilization or Parkin translocation; combined knockdown reduces mitochondrial polyubiquitylation of substrates including mitofusins, TOM20, TOM70, and VDAC1. |
siRNA knockdown, autophagic flux assays, ubiquitination assays |
Journal of cell science |
Medium |
24906799
|
| 2015 |
UBE2L3 is the preferred E2 conjugating enzyme for LUBAC (linear ubiquitin chain assembly complex, containing HOIL-1 and HOIP) in vivo, and is essential for LUBAC-mediated NF-κB activation; dominant-negative UBE2L3 (C86S) or UBE2L3 silencing abolishes NF-κB upregulation by LUBAC; the autoimmune risk haplotype increases UBE2L3 expression, correlating with enhanced NF-κB activation and plasma cell development. |
Reporter assays, dominant-negative mutant (C86S), siRNA knockdown, imaging flow cytometry for NF-κB translocation, flow cytometry for B cell subsets |
American journal of human genetics |
High |
25640675
|
| 2017 |
Structural analysis of HHARI RING1 in complex with UbcH7~Ub shows that a Zn2+-loop II extension unique to RBR RING1 (absent in canonical RING E3s) acts as a steric wedge to disrupt closed E2~Ub conformation, favoring open conformation required for Ub transfer to the E3 active-site cysteine rather than directly to substrate. |
Structural biology (crystal structure), biochemical assays |
Structure |
High |
28552575
|
| 2018 |
NMR and mass spectrometry show that UbcH7~Ub binds to parkin in the open conformation, with conjugated Ub binding at the RING1/IBR interface; recruitment of UbcH7~Ub and phosphorylation of parkin's Ubl domain act synergistically to rearrange the RING2 catalytic cysteine and enhance ubiquitin transfer activity. |
NMR chemical shift perturbation, mass spectrometry, in vitro ubiquitination assays |
The EMBO journal |
High |
30446597
|
| 2005 |
HIV Nef mediates exclusion of UbcH7 (UBE2L3) from lipid rafts via a p85Cool-1/βPix–c-Cbl ternary complex, preventing ubiquitination of activated Vav by c-Cbl/UbcH7 and thereby enhancing T cell signaling to promote HIV replication. |
Lipid raft fractionation, siRNA knockdown of p85Cool-1/βPix, ubiquitination assays, Co-IP |
Immunity |
Medium |
16356860
|
| 2009 |
The RBR E3 ligase Triad1 inhibits myeloid cell proliferation through differential interactions of its two RING domains with UbcH7 (UBE2L3) and Ubc13, catalyzing distinct ubiquitin chain types; deletion of either RING domain abrogates the inhibitory effect on myeloid colony formation. |
In vitro binding assays, myeloid clonogenic assays, domain deletion mutagenesis |
Leukemia |
Medium |
19340006
|
| 2015 |
Ndfip1 acts as an adaptor protein that facilitates recruitment of UbcH7 (UBE2L3) to the HECT E3 Itch, enhancing Itch ligase activity and Tak1 ubiquitination; the N-terminal region of Ndfip1 binds UbcH7 while the PY motif binds Itch, and reconstitution with full-length Ndfip1 (but not interaction-dead mutants) restores defective Tak1 ubiquitination. |
Co-immunoprecipitation, in vitro reconstitution, Ndfip1-/- and Itch-/- mouse models, mutagenesis |
Journal of immunology |
High |
25632008
|
| 2014 |
MAP1B light chain 1 (LC1) interacts with both CaV2.2 (N-type Ca2+ channel) and UBE2L3 via Co-IP; the LC1/UBE2L3 complex promotes ubiquitination and proteasomal degradation of CaV2.2, reducing channel surface expression and current density; MG132 prevents LC1-induced channel degradation. |
Co-immunoprecipitation, yeast two-hybrid, patch-clamp, proteasome inhibition |
Pflugers Archiv |
Medium |
24566975
|
| 2018 |
UBE2L3 (UBCH7) specifically stabilizes p27Kip1 by catalyzing the conjugation of heterotypic ubiquitin chains on p27 that are proteolytically incompetent; overexpression of UBE2L3 stabilizes p27 and delays G1-to-S transition, while depletion increases p27 turnover, without affecting p21, p57, cyclin A, or cyclin E levels. |
Overexpression, siRNA knockdown, cell cycle analysis, in vitro ubiquitination assays |
FASEB journal |
Medium |
30113882
|
| 2023 |
UBE2L3 promotes pro-IL-1β ubiquitylation and proteasomal disposal; deletion of Ube2l3 in mice reduces pro-IL-1β turnover in macrophages, leading to excessive mature IL-1β production, neutrophilic inflammation after inflammasome activation; RNAi screen identified TRIP12 and AREL1 (HECT E3s) as the partner E3 ligases that add destabilizing K27-, K29-, and K33-linked poly-ubiquitin chains on pro-IL-1β. |
Ube2l3 conditional knockout mouse, RNAi screen, in vitro ubiquitination assays, inflammasome activation assays |
Nature communications |
High |
37474493
|
| 2023 |
UBE2L3 is critical for NF-κB activation downstream of TLR7 stimulation via interaction with LUBAC; dimethyl fumarate (DMF) directly inhibits UBE2L3 and significantly reduces TLR7-induced NF-κB activation, plasmablast/memory B cell differentiation, and autoantibody secretion in SLE. |
Knockdown, overexpression, reporter assays, flow cytometry, DMF pharmacological inhibition |
Journal of autoimmunity |
Medium |
37001433
|
| 2024 |
SMURF1 acts as the E3 ligase partner of UBE2L3 (UbcH7) to ubiquitinate p27Kip1 with K29-linked chains, stabilizing p27 and promoting cell migration; SMURF1, UbcH7, and p27 co-localize at the leading edge of migrating cells; knockdown of SMURF1 or UbcH7 reduces cell migration. |
In vitro ubiquitination screen, K29 chain-type mutagenesis, co-localization imaging, knockdown assays, migration assays |
The Journal of biological chemistry |
High |
38301893
|
| 2024 |
MARCHF8 (a membrane RING E3 ligase) binds to and ubiquitinates UBE2L3 and CUL1, promoting their degradation and thereby stabilizing HPV16 E7; MARCHF8 knockdown increases UBE2L3 and CUL1 levels and enhances E7 ubiquitination; overexpression of CUL1 or UBE2L3 decreases E7 levels and suppresses tumor growth in vivo. |
Co-immunoprecipitation, ubiquitination assays, MARCHF8 knockdown, in vivo xenograft |
Journal of virology |
Medium |
38226814
|
| 2024 |
UBE2L3 interacts with the E3 ligase ZNF598 (confirmed by LC-MS/MS and Co-IP) and disrupts ZNF598-mediated ubiquitination of the autophagy protein LAMP-2, thereby reducing GPX4 expression and activating an autophagy-dependent ferroptosis pathway in benzene-exposed cells. |
Co-immunoprecipitation, LC-MS/MS, overexpression/knockdown, immunofluorescence, TEM |
Ecotoxicology and environmental safety |
Low |
39059346
|
| 2025 |
UBE2L3 specifically binds to and ubiquitinates MLKL (necroptosis effector), promoting its degradation; UBE2L3 knockdown increases phospho-MLKL and phospho-RIP1 levels and promotes necroptosis in osteosarcoma cells and in vivo xenograft tumors. |
Co-immunoprecipitation, ubiquitination assays, in vivo xenograft model |
World journal of surgical oncology |
Low |
39988669
|
| 2026 |
UBE2L3 interacts with the E3 ligase SMURF2 to control TSC2 protein ubiquitination and degradation; UBE2L3 downregulation increases TSC2, suppresses mTOR activity, and alters autophagy in TNBC cells, sensitizing tumors to anti-PD-1 therapy. |
In vivo CRISPR/Cas9 library screen, Co-IP, knockdown, in vivo tumor models |
International journal of biological sciences |
Medium |
41943836
|
| 2009 |
UbcH7 (UBE2L3) overexpression delays entry into S phase while its depletion increases S phase length and decreases cell proliferation; UbcH7 depletion increases Chk1 levels and decreases phospho-PTEN, placing UbcH7 in a PTEN/Akt/Chk1 pathway that regulates S phase length. |
Overexpression, siRNA knockdown, FACS cell cycle analysis, protein level analysis |
Cell division |
Low |
19664228
|
| 2017 |
TCDD (an AhR ligand) promotes AhR binding to the UBE2L3 (Ubch7) gene promoter and induces UbcH7 expression in the mouse brain; increased UbcH7 promotes ubiquitination and degradation of synphilin-1 via the UbcH7-parkin complex. |
ChIP, promoter assay, protein stability/half-life analysis in mouse brain |
Journal of biochemical and molecular toxicology |
Low |
28621812
|