Affinage

TVP23B

Golgi apparatus membrane protein TVP23 homolog B · UniProt Q9NYZ1

Length
205 aa
Mass
23.6 kDa
Annotated
2026-04-28
7 papers in source corpus 2 papers cited in narrative 3 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TVP23B is a trans-Golgi transmembrane protein that physically interacts with YIPF6 and is required for maintaining critical glycosylation enzymes within the Golgi proteome of colonocytes, thereby controlling Paneth cell homeostasis, goblet cell mucin glycosylation, and the formation of a sterile intestinal mucus barrier (PMID:37339972). Loss of TVP23B leads to decreased antimicrobial peptide production, a more penetrable mucus layer, and susceptibility to colitis (PMID:37339972).

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2023 High

    Forward genetics and proteomics established that TVP23B is a trans-Golgi protein that partners with YIPF6 to maintain Golgi glycosylation enzyme composition, thereby controlling Paneth cell function, goblet cell mucin glycosylation, and intestinal barrier integrity — answering how this previously uncharacterized transmembrane protein contributes to mucosal defense.

    Evidence ENU mutagenesis screen in mice, co-immunoprecipitation of TVP23B–YIPF6, Golgi proteomics of TVP23B/YIPF6-deficient colonocytes, in vivo mucus penetrability assays, and chemically/infectiously induced colitis models

    PMID:37339972

    Open questions at the time
    • The mechanism by which TVP23B–YIPF6 interaction retains or recruits specific glycosylation enzymes to the Golgi is undefined
    • Whether TVP23B has direct enzymatic or transporter activity versus acting as a structural scaffold is unknown
    • Relevance of TVP23B-dependent glycosylation outside the intestinal epithelium has not been explored
  2. 2025 Medium

    Macrophage-specific silencing of Tvp23b after myocardial infarction improved cardiac function and reduced fibrosis, broadening TVP23B's biological role beyond intestinal epithelium to macrophage-mediated tissue remodeling.

    Evidence In vivo lipidoid nanoparticle-mediated silencing in macrophages in a mouse MI model, with spatial transcriptomics and macrophage secretome analysis (preprint)

    PMID:40894159

    Open questions at the time
    • Preprint; awaits peer review and independent replication
    • The molecular mechanism linking TVP23B to macrophage secretory programs that activate cardiac fibroblasts is not defined
    • Whether the cardiac fibrosis role depends on the same Golgi glycosylation pathway described in colonocytes is untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct molecular activity of TVP23B — whether it acts as a cargo receptor, structural scaffold, or has intrinsic enzymatic function — remains unknown, as does the structural basis of its interaction with YIPF6.
  • No structural model of TVP23B or the TVP23B–YIPF6 complex exists
  • No substrate or direct enzymatic activity has been assigned to TVP23B
  • Tissue-specific and cell-type-specific functions beyond intestinal epithelium and macrophages are uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Localization
GO:0005794 Golgi apparatus 1
Pathway
R-HSA-392499 Metabolism of proteins 1
Partners

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2023 TVP23B is a trans-Golgi transmembrane protein that controls Paneth cell homeostasis and goblet cell glycosylation function, leading to decreased antimicrobial peptides and a more penetrable mucus layer when absent; it physically binds the Golgi protein YIPF6, and both proteins are required for maintaining critical glycosylation enzymes in the Golgi proteome of colonocytes. Forward genetic screen (ENU mutagenesis), co-immunoprecipitation/binding assay (TVP23B–YIPF6 interaction), Golgi proteomics of TVP23B- and YIPF6-deficient colonocytes, in vivo loss-of-function with chemically induced and infectious colitis phenotypic readouts Nature communications High 37339972
2023 TVP23B is necessary for formation of the sterile mucin layer of the intestine; its absence disturbs the balance of host and microbe in vivo, demonstrating a direct role in intestinal barrier function. In vivo loss-of-function mouse model with mucus penetrability assays and microbiome analysis Nature communications High 37339972
2025 Macrophage-specific in vivo silencing of Tvp23b in mice with myocardial infarction significantly improved cardiac function and suppressed fibrosis, placing TVP23B in a macrophage niche-mediated fibroblast activation pathway. In vivo gene silencing via lipidoid nanoparticles targeting macrophages in MI mouse model, with cardiac function and fibrosis readouts; supported by spatial transcriptomics and in vitro macrophage secretome experiments medRxivpreprint Medium 40894159

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2001 The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals unique genome architectural features and provides insights into the recent evolution of new genes. Genome research 116 11381029
2023 Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation. Nature communications 12 37339972
2022 Identification of Candidate Genes for Pigmentation in Camels Using Genotyping-by-Sequencing. Animals : an open access journal from MDPI 8 35565522
2014 Role of FAM18B in diabetic retinopathy. Molecular vision 8 25221423
2026 Transcriptomic integration nominates FOXN2 as a candidate schizophrenia risk gene. Behavioural brain research 0 41616909
2025 Interpretable machine learning coupled to spatial transcriptomics unveils mechanisms of macrophage-driven fibroblast activation in ischemic cardiomyopathy. medRxiv : the preprint server for health sciences 0 40894159
2025 Sequencing Analysis Demonstrates That a Complex Genetic Architecture Contributes to Risk for Spina Bifida. Birth defects research 0 41013918