Affinage

TULP2

Tubby-related protein 2 · UniProt O00295

Length
520 aa
Mass
58.7 kDa
Annotated
2026-06-10
22 papers in source corpus 7 papers cited in narrative 9 extracted findings
Cross-family judge faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TULP2 is a testis-enriched RNA-binding protein that functions in spermatid differentiation and sperm motility, with its loss causing male sterility marked by elongated spermatid apoptosis, restricted spermatid release, and defective sperm tail structures (PMID:33763418). It is expressed specifically in round and elongating spermatids of the adult testis (PMID:35603654). Mechanistically, TULP2 acts as a coordinator of intraflagellar transport during spermiogenesis: it interacts with IFT components including IFT20, IFT80, IFT70A, BBS7, DYNLT2B, and HDAC6, and its loss mislocalizes IFT20 in testicular spermatids and spermatozoa and IFT70A and IFT80 in spermatozoa (PMID:40613306). Correct folding of TULP2 depends on the chaperonin CCT, whose subunit CCT8 binds TULP2 through its apical domain; CCT8 knockdown causes TULP2 to form cytoplasmic aggregates and impairs its ciliogenic function (PMID:33763418, PMID:40613306). At the ultrastructural level, TULP2 deletion produces abnormal outer dense fiber structure in sperm tails without affecting mitochondrial sheath formation (PMID:35619658), and at the functional level TULP2 is required for sperm capacitation, the acrosome reaction, and fertilization (PMID:40613306). TULP2 protein abundance is governed by a conserved acetylation/ubiquitination switch shared across the TULP family, in which acetylation stabilizes the protein and ubiquitination at the unacetylated site promotes its turnover (PMID:33187986).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2000 Low

    An initial question was where TULP2 protein resides in cells; ectopic expression placed it in the nucleus, an early and isolated localization clue.

    Evidence GFP-tagged TULP2 expression and fluorescence imaging in transfected cells

    PMID:11000483

    Open questions at the time
    • Single overexpression experiment with GFP tag, no endogenous validation
    • No functional consequence demonstrated
    • Conflicts with later spermatid cytoplasmic/ciliary localization data
  2. 2020 Medium

    How TULP2 protein levels are controlled was unknown; assays showed its stability is set by a conserved acetylation/ubiquitination switch shared across the TULP family.

    Evidence Protein-interaction network analysis with acetylation/ubiquitination assays and pharmacological modulation, primarily for TULP3 and extended to TULP2

    PMID:33187986

    Open questions at the time
    • TULP2 data secondary to TULP3 findings
    • Specific regulated lysines for TULP2 not mapped
    • Physiological context of the switch in spermatids untested
  3. 2021 High

    The cellular role of TULP2 was undefined; a knockout established it as a testis-specific, spermatid-localized RNA-binding protein essential for spermatid differentiation and sperm motility.

    Evidence Tulp2 knockout mice with transcriptome sequencing and IP-MS

    PMID:33763418

    Open questions at the time
    • Direct RNA targets and binding mode not defined
    • Causal link between transcript regulation and tail defects unresolved
  4. 2021 Medium

    It was unclear how TULP2 attains a functional state; IP-MS identified CCT8 as a partner, implicating the CCT chaperonin in folding TULP2.

    Evidence Immunoprecipitation and mass spectrometry in testis

    PMID:33763418

    Open questions at the time
    • Single Co-IP/MS in original report
    • Folding dependence not yet demonstrated functionally at this stage
  5. 2021 Medium

    Whether TULP2 is functionally interchangeable with its ciliary paralog TULP3 was tested; rescue assays showed TULP2 cannot restore ciliogenesis and only partially restores ciliary protein trafficking, defining limited functional equivalence.

    Evidence Rescue experiments in TULP3-knockout RPE-1 cells with ciliary localization assays for ARL13B, INPP5E, GPR161, IFT140

    PMID:34462398

    Open questions at the time
    • Heterologous somatic cell context, not spermatids
    • Basis for partial rescue not mechanistically explained
  6. 2022 High

    The structural target of TULP2 loss in the sperm tail was unknown; two independent KO lines identified abnormal outer dense fiber structure while sparing the mitochondrial sheath.

    Evidence Two independent Tulp2 KO lines with scanning and transmission electron microscopy

    PMID:35619658

    Open questions at the time
    • Molecular link between TULP2 and ODF assembly unresolved
    • Whether the defect is formation or maintenance not distinguished
  7. 2022 Medium

    The precise cell types expressing TULP2 were refined; validated antibody staining localized it to round and elongating spermatids.

    Evidence Immunofluorescence with validated polyclonal antibody and Western blot

    PMID:35603654

    Open questions at the time
    • Subcellular compartment within spermatids not resolved at this stage
    • Temporal dynamics across spermiogenesis not mapped
  8. 2025 High

    The mechanistic role of TULP2 was clarified as an IFT coordinator: it binds multiple IFT components and its loss mislocalizes them, while CCT8 apical-domain binding is required to keep TULP2 soluble and functional.

    Evidence Co-IP, CCT8 knockdown with localization analysis, and quantitative proteomics in Tulp2 KO mice

    PMID:40613306

    Open questions at the time
    • Direct versus indirect nature of each IFT interaction not fully resolved
    • How TULP2 organizes IFT cargo movement mechanistically unknown
  9. 2025 Medium

    Downstream physiological consequences were defined; TULP2 KO mice fail in sperm capacitation, acrosome reaction, and fertilization.

    Evidence Tulp2 knockout mouse analysis with sperm function assays

    PMID:40613306

    Open questions at the time
    • Single lab
    • Mechanistic chain from IFT/ODF defects to capacitation failure not delineated

Open questions

Synthesis pass · forward-looking unresolved questions
  • How TULP2's RNA-binding activity, IFT coordination, and outer dense fiber assembly are mechanistically integrated during spermiogenesis remains unresolved.
  • No direct RNA target set defined
  • No structure of TULP2 or its IFT complexes
  • Causal hierarchy among transcript regulation, IFT trafficking, and ODF defects unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003723 RNA binding 1 GO:0060090 molecular adaptor activity 1
Localization
GO:0005929 cilium 2 GO:0005829 cytosol 1
Pathway
R-HSA-1474165 Reproduction 2 R-HSA-1852241 Organelle biogenesis and maintenance 1

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2021 TULP2 is an RNA-binding protein specifically expressed in the testis and localized to spermatids. Knockout of Tulp2 in mice causes male sterility with increased elongated spermatid apoptosis, restricted spermatid release, defective sperm tail structures, and reduced ATP contents, indicating a role in spermatid differentiation and sperm motility. Transcriptome sequencing revealed TULP2 regulates specific transcripts related to the cytoskeleton, apoptosis, RNA metabolism and biosynthesis, and energy metabolism. Tulp2 knockout mice, transcriptome sequencing, immunoprecipitation and mass spectrometry Frontiers in cell and developmental biology High 33763418
2021 TULP2 protein is recognized by the chaperone CCT8 and is correctly folded by the CCT complex to play a role in spermiogenesis, as indicated by immunoprecipitation and mass spectrometry showing CCT8 as an interaction partner. Immunoprecipitation and mass spectrometry Frontiers in cell and developmental biology Medium 33763418
2025 The apical domain of chaperonin CCT8 interacts with TULP2, and knockdown of CCT8 results in formation of TULP2 aggregates in the cytoplasm, impairing its function in ciliogenesis. TULP2 interacts with intraflagellar transport (IFT) components including IFT20, IFT80, IFT70A, BBS7, DYNLT2B, and HDAC6, and loss of TULP2 causes mislocalization of IFT20 in testicular spermatids and spermatozoa, and mislocalization of IFT70A and IFT80 in spermatozoa. Co-IP, CCT8 knockdown with localization analysis, quantitative proteomics in Tulp2 KO mice Biology of reproduction High 40613306
2025 TULP2 is essential for sperm capacitation, acrosome reaction, and fertilization, as demonstrated by analysis of Tulp2-/- mice. Tulp2 knockout mouse analysis, sperm function assays Biology of reproduction Medium 40613306
2022 TULP2 deletion in mice causes abnormal outer dense fiber (ODF) structure in sperm tails, as observed by transmission electron microscopy, indicating a role in correct formation and/or maintenance of ODF. No overt abnormalities were found in mitochondrial sheath formation by freeze-fracture SEM. Two independent Tulp2 KO mouse lines (homologous recombination and CRISPR/Cas9), scanning and transmission electron microscopy Reproductive medicine and biology High 35619658
2020 TULP2 protein stability is regulated by an acetylation switch analogous to that described for TULP3: acetylation of key lysine residues increases protein abundance while deacetylation decreases it, with ubiquitination occurring at the unacetylated site. This regulatory mechanism is conserved across TULP family members including TULP1, TULP2, and TULP4. Protein-protein interaction network analysis, acetylation/ubiquitination assays, pharmacological modulation The Journal of biological chemistry Medium 33187986
2021 TULP2, unlike TULP3 and TUB, cannot rescue defective cilia formation in TULP3-knockout RPE-1 cells, and only partially rescues defective ciliary localization of ARL13B, INPP5E, GPR161, and IFT140 in these cells, indicating TULP2 has limited functional equivalence to TULP3 in ciliary protein trafficking. TULP3 KO RPE-1 cells, rescue experiments with overexpression of TULP2, ciliary localization assays Molecules and cells Medium 34462398
2000 GFP-tagged TULP2 localizes to the nucleus in transfected cells, similar to TULP1, as observed by fluorescence imaging. GFP-tagged expression constructs, fluorescence imaging Brain research. Molecular brain research Low 11000483
2022 TULP2 protein is expressed specifically in round spermatids and elongating spermatids in adult mouse testis, as demonstrated by immunofluorescence staining with a validated polyclonal antibody. Immunofluorescence staining with validated rabbit polyclonal antibody, Western blot Xi bao yu fen zi mian yi xue za zhi Medium 35603654

Source papers

Stage 0 corpus · 22 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes. Proceedings of the National Academy of Sciences of the United States of America 175 15738400
1997 Molecular characterization of TUB, TULP1, and TULP2, members of the novel tubby gene family and their possible relation to ocular diseases. Proceedings of the National Academy of Sciences of the United States of America 120 9096357
2004 Tubby proteins: the plot thickens. Nature reviews. Molecular cell biology 99 14708010
1998 Molecular characterization of a novel tubby gene family member, TULP3, in mouse and humans. Genomics 59 9828123
2004 Genome-wide linkage analysis for severe obesity in french caucasians finds significant susceptibility locus on chromosome 19q. Diabetes 56 15220211
2000 GFP-tagged expression and immunohistochemical studies to determine the subcellular localization of the tubby gene family members. Brain research. Molecular brain research 41 11000483
2019 A Diagnostic Panel of DNA Methylation Biomarkers for Lung Adenocarcinoma. Frontiers in oncology 36 31850197
2018 Congenital glaucoma and CYP1B1: an old story revisited. Human genetics 36 29556725
2017 The tubby-like proteins kingdom in animals and plants. Gene 34 29109004
2021 TULP2, a New RNA-Binding Protein, Is Required for Mouse Spermatid Differentiation and Male Fertility. Frontiers in cell and developmental biology 21 33763418
2001 Molecular cloning, expression and regulation of the avian tubby-like protein 1 (tulp1) gene. Gene 18 11483369
2021 Differential Roles of Tubby Family Proteins in Ciliary Formation and Trafficking. Molecules and cells 14 34462398
2020 Population-specific, recent positive directional selection suggests adaptation of human male reproductive genes to different environmental conditions. BMC evolutionary biology 14 32054438
2020 A conserved acetylation switch enables pharmacological control of tubby-like protein stability. The Journal of biological chemistry 11 33187986
2023 A novel homozygous TUB mutation associated with autosomal recessive retinitis pigmentosa in a consanguineous Chinese family. BMC medical genomics 5 36650547
2022 TULP2 deletion mice exhibit abnormal outer dense fiber structure and male infertility. Reproductive medicine and biology 4 35619658
2025 Nomogram construction based on characteristic genes and clinical variables to predict the risk of multiple organ dysfunction syndrome caused by influenza in children. Translational pediatrics 2 39944873
2025 TUB-like protein 2, a substrate of CCT8, is essential for the intraflagellar transport during spermiogenesis in mice†. Biology of reproduction 1 40613306
2025 Genome-Wide Association Study and Rare Variant Association Studies of Strabismus in the All of Us Research Program. Ophthalmology science 1 40837069
2026 Methylation biomarkers in non-regressive cervical intraepithelial neoplasia grade 2 lesions: an epigenome wide association study. British journal of cancer 0 41965938
2025 Bioinformatics and Experimental Validation of Diagnostic Marker Genes for Myocardial Infarction and Analysis of Their Immune Cell Infiltration. Biochemical genetics 0 40828202
2022 [Preparation and application of rabbit polyclonal antibody against mouse Tubby-like protein 2 (TULP2)]. Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology 0 35603654

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