Affinage

Showing TAS2R13TRB3 is a alias.

TAS2R13

Taste receptor type 2 member 13 · UniProt Q9NYV9

Length
303 aa
Mass
35.1 kDa
Annotated
2026-06-10
14 papers in source corpus 4 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TAS2R13 is a functional bitter taste receptor that responds to structurally diverse agonists and is subject to inhibition by plant-derived phenolics. It is activated by the anti-HIV protease inhibitors lopinavir and ritonavir, as shown by calcium mobilization in receptor-expressing cells (PMID:37625013). Its activity is inhibited by Morus alba leaf extract (PMID:37796414) and by phenolic acids and flavonoids from Cornelian cherry, including naringin and quercetin, with these compounds engaging the receptor in a manner comparable to model agonists (PMID:38987427). Ligand recognition occurs at a half-open cavity at the receptor's N-terminal region, mediated by hydrogen-bond and hydrophobic interactions (PMID:37229471). Beyond ligand activation and inhibition characterized through cell-based calcium assays and docking, no downstream signaling partners or structural model have been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2023 Medium

    Establishing that TAS2R13 is a functional receptor with identifiable agonists answered whether specific drug molecules can trigger its activity, linking bitter perception to off-target taste responses of clinical compounds.

    Evidence Calcium mobilization assay in cells expressing TAS2R13, tested with lopinavir and ritonavir

    PMID:37625013

    Open questions at the time
    • Single lab, single functional method
    • Downstream G-protein coupling and signaling cascade not defined
    • No dose-response potency comparison across receptors reported here
  2. 2023 Low

    Computational docking addressed where ligands bind on TAS2R13, locating a half-open N-terminal cavity engaged through hydrogen-bond and hydrophobic contacts.

    Evidence Molecular docking / in silico binding affinity analysis of theasinensin A against TAS2R13

    PMID:37229471

    Open questions at the time
    • Computational docking only, no experimental functional validation of theasinensin A binding to TAS2R13
    • No experimental structure of the receptor
    • Predicted cavity not confirmed by mutagenesis
  3. 2023 Medium

    Identifying that a plant extract suppresses TAS2R13 activity established the receptor as a target for bitterness inhibition, not only activation.

    Evidence Calcium release assay in transfected HEK293T cells with Morus alba leaf extract

    PMID:37796414

    Open questions at the time
    • Active inhibitory constituents within the extract not isolated
    • Mechanism of inhibition (orthosteric vs allosteric) undefined
    • Single lab, single method
  4. 2024 Medium

    Pairing docking with functional assays identified specific flavonoids that inhibit TAS2R13 and compared their binding behavior to model agonists, refining structure-activity understanding of the receptor.

    Evidence Molecular docking combined with calcium-based inhibition functional assay in receptor-expressing cells, testing Cornelian cherry phenolics including naringin and quercetin

    PMID:38987427

    Open questions at the time
    • Single lab
    • Binding poses not validated by mutagenesis or structural data
    • Physiological relevance of inhibition in vivo not tested

Open questions

Synthesis pass · forward-looking unresolved questions
  • The downstream signaling mechanism, receptor structure, and physiological role of TAS2R13 beyond ligand activation/inhibition remain undefined.
  • No experimental structure or validated binding-site residues
  • G-protein coupling and intracellular cascade not characterized in the corpus
  • In vivo taste or extra-oral physiological role not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 3

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2023 Lopinavir activates TAS2R13 (and TAS2R1), while ritonavir activates TAS2R13 (and TAS2R1, TAS2R8, TAS2R14), as determined by calcium mobilization assay in cells expressing these receptors. Calcium mobilization assay in receptor-expressing cells Chemical senses Medium 37625013
2023 Theasinensin A binds to a half-open cavity at the N-terminal of TAS2R13 (as well as TAS2R14 and TAS2R16), with hydrogen bond and hydrophobic interactions contributing to differential bitterness receptor activation; TAS2R16 showed the highest affinity among the three receptors tested. Molecular docking / in silico binding affinity analysis Frontiers in nutrition Low 37229471
2023 Morus alba leaf extract inhibits TAS2R13 (and TAS2R3) bitter taste receptor activity, as measured by calcium release assay in transfected HEK293T cells. Calcium release assay in transfected HEK293T cells Plant foods for human nutrition Medium 37796414
2024 Selected phenolic acids and flavonoids from Cornelian cherry (including naringin and quercetin) inhibit TAS2R13 receptor activity; binding affinity and interaction mechanisms with TAS2R13 varied among compounds, with naringin and quercetin showing binding affinity most similar to model agonists chloroquine and denatonium, validated by in vitro functional assays in receptor-expressing cells. Molecular docking combined with in vitro functional assay (calcium-based inhibition assay in receptor-expressing cells) Scientific reports Medium 38987427

Source papers

Stage 0 corpus · 14 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Functional genomics reveals dysregulation of cortical olfactory receptors in Parkinson disease: novel putative chemoreceptors in the human brain. Journal of neuropathology and experimental neurology 102 23656994
2014 Genetic variations in taste receptors are associated with chronic rhinosinusitis: a replication study. International forum of allergy & rhinology 83 24415641
2012 Variation in the gene TAS2R13 is associated with differences in alcohol consumption in patients with head and neck cancer. Chemical senses 45 22824251
2012 Assessment of the presence of chemosensing receptors based on bitter and fat taste in the gastrointestinal tract of young pig. Journal of animal science 25 23365305
2021 Transcriptomic profiling as biological markers of depression - A pilot study in unipolar and bipolar women. The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry 22 33821765
2015 Pathway, in silico and tissue-specific expression quantitative analyses of oesophageal squamous cell carcinoma genome-wide association studies data. International journal of epidemiology 20 26635288
2023 Bitterness quantification and simulated taste mechanism of theasinensin A from tea. Frontiers in nutrition 12 37229471
2012 Identification of novel genes for bitter taste receptors in sheep (Ovis aries). Animal : an international journal of animal bioscience 6 23171479
2023 Anti-HIV drugs lopinavir/ritonavir activate bitter taste receptors. Chemical senses 5 37625013
2023 Morus alba L. Leaves (WML) Modulate Sweet (TAS1R) and Bitter (TAS2R) Taste in the Studies on Human Receptors - A New Perspective on the Utilization of White Mulberry Leaves in Food Production? Plant foods for human nutrition (Dordrecht, Netherlands) 5 37796414
2025 Exploring the Role of TAS2Rs in Obesity: Insights From Human and Rat Models. Obesity (Silver Spring, Md.) 2 41140001
2024 Docking analysis of phenolic acid and flavonoids with selected TAS2R receptors and in vitro experiment. Scientific reports 2 38987427
2024 The Influence of Taste Genes on Body Fat and Alcohol Consumption. Nutrients 1 38892689
2023 The evolution of bitter taste receptor gene in primates: Gene duplication and selection. Ecology and evolution 1 37841228

Missed literature

Know a paper Affinage missed for TAS2R13? Flag it for the maintainers and the community.

No submissions yet.