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Showing GTF2H1TFIIH is a alias.

GTF2H1

General transcription factor IIH subunit 1 · UniProt P32780

Length
548 aa
Mass
62.0 kDa
Annotated
2026-06-10
25 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

GTF2H1 encodes the 62-kDa core subunit of the transcription factor IIH (TFIIH) complex, which functions in both RNA polymerase II-dependent transcription and nucleotide excision repair (NER) (PMID:30287812, PMID:7789978). GTF2H1 levels set TFIIH stability and function: depletion of the SWI/SNF ATPases BRM/SMARCA2 or BRG1/SMARCA4 downregulates GTF2H1, compromising TFIIH integrity and rendering SWI/SNF-deficient cells sensitive to UV irradiation and cisplatin in a GTF2H1-dependent manner (PMID:30287812). In the melanocytic lineage, MITF directly transactivates GTF2H1, and MITF loss collapses GTF2H1-dependent TFIIH with consequent proteasomal degradation of the CDK7-containing CAK subcomplex, defining a MITF→GTF2H1→TFIIH-CAK axis that governs general transcription and UV-induced NER (PMID:30651597). Consistent with its NER role, GTF2H1 protein is induced in hepatic cells responding to AZT-induced DNA damage downstream of the recognition factor XPC (PMID:21192964).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 1995 Medium

    Establishing the molecular identity and genomic position of the gene was the first step, fixing GTF2H1 as the 62-kDa TFIIH subunit and assigning it a chromosomal locus.

    Evidence FISH on banded chromosomes with YAC/cosmid physical mapping

    PMID:7789978

    Open questions at the time
    • No functional perturbation linking the locus to TFIIH activity
    • Provides identity/position but not mechanism in transcription or repair
  2. 2010 Medium

    Whether GTF2H1-containing TFIIH participates in the cellular response to a specific DNA-damaging agent was addressed by showing GTF2H1 induction and XPC-dependent NER engagement upon AZT treatment.

    Evidence PCR array, Western blot, and shRNA knockdown of XPC with viability/apoptosis assays in HepG2 hepatoma cells

    PMID:21192964

    Open questions at the time
    • Pathway placement inferred from XPC epistasis; no GTF2H1-specific perturbation performed
    • Does not establish whether GTF2H1 induction is functionally required for AZT resistance
  3. 2013 Low

    Whether GTF2H1 induction by AZT extends beyond cancer cells was tested by measuring dose-dependent upregulation in non-transformed hepatic cells.

    Evidence PCR array and Western blot across AZT dose range in immortalized THLE2 cells

    PMID:23675285

    Open questions at the time
    • Single-method protein measurement with no GTF2H1-specific functional perturbation
    • Corroborative only; adds little new mechanism beyond the prior HepG2 finding
  4. 2018 High

    The question of what maintains GTF2H1 expression and how its level controls TFIIH function was answered by showing SWI/SNF ATPases promote GTF2H1 transcription and that GTF2H1 abundance dictates TFIIH stability and DNA-damage sensitivity.

    Evidence RNAi depletion of BRM/BRG1, TFIIH stability and GTF2H1 expression measurement, UV and cisplatin sensitivity assays in SWI/SNF-deficient cancer cells

    PMID:30287812

    Open questions at the time
    • Direct versus indirect transcriptional control of GTF2H1 by SWI/SNF not fully resolved
    • Whether the same dependency holds across non-cancer cell types untested
  5. 2019 High

    Lineage-specific control of GTF2H1 was established by demonstrating MITF directly transactivates it, defining a regulatory axis in which GTF2H1 loss destabilizes the TFIIH-CAK subcomplex.

    Evidence ChIP, transactivation/reporter assays, and MITF depletion with CDK7 stability, NER, and transcription readouts in melanoma cells and in vivo

    PMID:30651597

    Open questions at the time
    • Generality of MITF control beyond the melanocytic lineage unknown
    • Mechanism of CDK7 degradation upon GTF2H1 loss not structurally defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • The structural basis by which GTF2H1/p62 organizes TFIIH and coordinates the transcription versus NER functions of the complex remains uncharacterized in this corpus.
  • No structural or biochemical reconstitution of p62 within TFIIH in the timeline
  • Direct enzymatic or scaffolding contribution of GTF2H1 to NER not dissected

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140223 general transcription initiation factor activity 3
Localization
GO:0005634 nucleus 2
Pathway
R-HSA-73894 DNA Repair 3 R-HSA-74160 Gene expression (Transcription) 2
Complex memberships
TFIIHTFIIH-CAK

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 GTF2H1 (p62) is a core subunit of the TFIIH complex whose expression is transcriptionally promoted by the SWI/SNF ATPases BRM/SMARCA2 and BRG1/SMARCA4; inactivation of either ATPase downregulates GTF2H1, compromising TFIIH stability and function in both transcription and nucleotide excision repair (NER). The sensitivity of SWI/SNF-deficient cells to UV irradiation and cisplatin depends directly on GTF2H1 levels. RNAi/genetic depletion of BRM or BRG1, measurement of GTF2H1 expression and TFIIH stability, UV and cisplatin sensitivity assays in SWI/SNF-deficient cancer cells Nature Communications High 30287812
2019 MITF directly transactivates GTF2H1 as a core element of TFIIH, thereby controlling general transcription and UV-induced nucleotide excision repair in the melanocytic lineage. MITF depletion leads to consecutive loss of CDK7 in the TFIIH-CAK subcomplex, targeted for proteasomal degradation, establishing a MITF→GTF2H1→TFIIH-CAK regulatory axis. Chromatin immunoprecipitation, transactivation assays, MITF depletion (siRNA/shRNA) with measurement of GTF2H1 levels, CDK7 protein stability, NER activity, and transcriptional output in melanoma cells and in vivo models Oncogene High 30651597
2010 GTF2H1 protein level is upregulated in human hepatoma HepG2 cells treated with zidovudine (AZT), and knockdown of XPC (a NER recognition factor that acts upstream of TFIIH/GTF2H1) increases AZT incorporation into DNA and sensitizes cells to AZT toxicity, placing GTF2H1-containing TFIIH in the NER pathway responding to AZT-induced DNA damage. Real-time PCR array, Western blot for GTF2H1 protein, shRNA knockdown of XPC, cell viability, LDH release, apoptosis, and cell cycle assays in HepG2 cells Toxicology and Applied Pharmacology Medium 21192964
2013 GTF2H1 protein level is significantly increased in a dose-dependent manner in immortalized human hepatic THLE2 cells treated with AZT, implicating the NER pathway (of which TFIIH/GTF2H1 is a component) in the response to AZT-induced DNA damage in non-cancerous liver cells. PCR array expression profiling and Western blot for GTF2H1 protein across AZT dose range in THLE2 cells International Journal of Biomedical Science Low 23675285
1995 GTF2H1 encodes the 62-kDa subunit of TFIIH and was precisely localized to the distal p13–proximal p15.1 region of human chromosome 11 by physical mapping using YACs, cosmids, and fluorescence in situ hybridization. Fluorescence in situ hybridization (FISH) on high-resolution banded chromosomes, YAC/cosmid physical mapping Genomics Medium 7789978

Source papers

Stage 0 corpus · 25 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Study of antimutagenic and antioxidant activities of gallic acid and 1,2,3,4,6-pentagalloylglucose from Pistacia lentiscus. Confirmation by microarray expression profiling. Chemico-biological interactions 140 17129579
1995 A high-resolution integrated physical, cytogenetic, and genetic map of human chromosome 11: distal p13 to proximal p15.1. Genomics 56 7789978
2012 Polymorphisms in miRNA-binding sites of nucleotide excision repair genes and colorectal cancer risk. Carcinogenesis 52 22581836
2011 Integrated genomic profiling identifies loss of chromosome 11p impacting transcriptomic activity in aggressive pituitary PRL tumors. Brain pathology (Zurich, Switzerland) 48 21251114
2018 Genomic instability in adult men involved in processing electronic waste in Northern China. Environment international 34 29727754
2018 DNA damage sensitivity of SWI/SNF-deficient cells depends on TFIIH subunit p62/GTF2H1. Nature communications 28 30287812
2020 The plasma peptides of sepsis. Clinical proteomics 26 32636717
2010 Genome-wide association study identifies two novel regions at 11p15.5-p13 and 1p31 with major impact on acute-phase serum amyloid A. PLoS genetics 21 21124955
2013 HEFT: eQTL analysis of many thousands of expressed genes while simultaneously controlling for hidden factors. Bioinformatics (Oxford, England) 18 24307700
2019 Lineage-specific control of TFIIH by MITF determines transcriptional homeostasis and DNA repair. Oncogene 17 30651597
2014 MicroRNA-mRNA functional pairs for cisplatin resistance in ovarian cancer cells. Chinese journal of cancer 17 24589211
2010 XPC is essential for nucleotide excision repair of zidovudine-induced DNA damage in human hepatoma cells. Toxicology and applied pharmacology 16 21192964
2008 Genetic variants in GTF2H1 and risk of lung cancer: a case-control analysis in a Chinese population. Lung cancer (Amsterdam, Netherlands) 10 18692935
2013 Role of DNA Repair Pathways in Response to Zidovudine-induced DNA Damage in Immortalized Human Liver THLE2 Cells. International journal of biomedical science : IJBS 9 23675285
2016 Integration of genome-wide association and extant brain expression QTL identifies candidate genes influencing prepulse inhibition in inbred F1 mice. Genes, brain, and behavior 6 26482417
2020 Single Nucleotide Polymorphisms in MiRNA Binding Sites of Nucleotide Excision Repair-Related Genes Predict Clinical Benefit of Oxaliplatin in FOLFOXIRI Plus Bevacizumab: Analysis of the TRIBE Trial. Cancers 5 32629861
2024 Exploration of Positive and Negative Schizophrenia Symptom Heterogeneity and Establishment of Symptom-Related miRNA-mRNA Regulatory Network: Based on Transcriptome Sequencing Data. Molecular neurobiology 2 38267752
2024 Systematic identification of pathogenic variants of non-small cell lung cancer in the promoters of DNA-damage repair genes. EBioMedicine 2 39631147
2023 Key Risk Genes Identified From the Postmortem Brain of Patients With Major Depressive Disorder and Their Potential Clinical Applications. The international journal of neuropsychopharmacology 2 37235790
2022 Impact of GTF2H1 and RAD54L2 polymorphisms on the risk of lung cancer in the Chinese Han population. BMC cancer 2 36384536
2015 Evolutionary distance of amino acid sequence orthologs across macaque subspecies: identifying candidate genes for SIV resistance in Chinese rhesus macaques. PloS one 2 25884674
2023 A comprehensive identification of potential molecular targets and small drugs candidate for melanoma cancer using bioinformatics and network-based screening approach. Journal of biomolecular structure & dynamics 1 37534476
2023 Whole-genome resequencing to explore genome‑wide single nucleotide polymorphisms and genes associated with avian leukosis virus subgroup J infection in chicken. 3 Biotech 1 38031589
2019 Highlighted role of VEGFA in follow up of celiac disease. Gastroenterology and hepatology from bed to bench 1 31528310
2023 Identification of two unannotated miRNAs in classic Hodgkin lymphoma cell lines. PloS one 0 36961799

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