Affinage

TENM2

Teneurin-2 · UniProt Q9NT68

Length
2774 aa
Mass
307.8 kDa
Annotated
2026-06-10
51 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TENM2 (TEN2/Lasso) is a type II transmembrane cell-adhesion protein that organizes synaptic and axonal connectivity through ligand-gated trans-cellular signaling (PMID:29677516, PMID:23884953). Its extracellular region adopts a Tc-toxin-like architecture in which a large β-barrel partially encapsulates a C-terminal domain, sealed by an immunoglobulin-like domain and apposed by a β-propeller; an alternatively spliced insert within the β-propeller acts as a molecular switch, with one variant driving latrophilin (LPHN)-dependent trans-cellular signaling and the other inducing inhibitory postsynaptic differentiation (PMID:29677516). The N-terminal lectin domain of LPHN3 docks onto the TEN2 barrel at a site distant from the spliced region, and splicing controls this interaction by sterically occluding access to the LPHN-binding surface rather than altering it directly; mutation of this surface abolishes LPHN3 binding and selectively impairs excitatory but not inhibitory synapse formation, consistent with TEN2 acting within a trimeric TEN2–LPHN3–FLRT3 complex (PMID:32358586). LPHN engagement and TEN2 homodimerization are mutually exclusive, occupying distinct conserved interfaces (PMID:41991904). At inhibitory postsynapses, TEN2 binds microtubule plus-end tracking EB proteins to recruit microtubules and support GABAA receptor exocytosis (PMID:37272607), while proteolytically shed soluble TEN2 ECR diffuses to engage LPHN1 on growth cones, triggering local exocytosis and gradient-directed axon turning (PMID:30967757). In vivo, TENM2 is required for ipsilateral retinal ganglion cell projections and binocular circuit formation, acting downstream of Zic2 through regulation of EphB1 in ventral retina (PMID:23884953). Beyond the nervous system, TENM2 suppresses a brown-adipocyte (UCP1) transcriptional program in human white adipocyte precursors (PMID:28088466).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2013 High

    Established that TENM2 has a non-redundant in vivo role in wiring binocular visual circuits, placing it within a defined molecular pathway for ipsilateral retinal projections.

    Evidence Ten-m2 KO mouse with axonal tracing, immunohistochemistry, visually evoked potentials, and behavior

    PMID:23884953

    Open questions at the time
    • Whether TEN-M2 regulates EphB1 directly or indirectly is not resolved
    • Molecular mechanism linking TEN-M2 to Zic2/EphB1 not biochemically defined
  2. 2017 Medium

    Extended TENM2 function beyond neurons by showing it represses a thermogenic transcriptional program in adipocyte precursors.

    Evidence siRNA knockdown in human SGBS preadipocytes with qRT-PCR, western blot, and Seahorse respirometry

    PMID:28088466

    Open questions at the time
    • Mechanism by which TENM2 suppresses UCP1 is unknown
    • No link established between adipocyte role and the synaptic/adhesion functions
  3. 2018 High

    Solved the architecture of the TEN2 extracellular region and identified an alternatively spliced β-propeller insert as the switch toggling between LPHN-dependent excitatory signaling and inhibitory postsynaptic differentiation.

    Evidence 3.1 Å single-particle cryo-EM with splice-variant functional assays

    PMID:29677516

    Open questions at the time
    • Structural basis for how the splice switch is decoded into opposing synaptic outcomes not fully defined
    • No structure of TEN2 bound to a partner in this study
  4. 2019 Medium

    Defined a paracrine mode in which proteolytically shed soluble TEN2 acts as a diffusible LPHN1 ligand directing axon guidance, distinguishing it from membrane-tethered adhesion signaling.

    Evidence Affinity isolation of TEN2/Lasso as LPHN1 ligand, growth-cone turning imaging, and LPHN1 KO epistasis

    PMID:30967757

    Open questions at the time
    • Identity of the protease(s) that shed TEN2 not established
    • Intracellular signaling cascade downstream of LPHN1 redistribution not detailed
  5. 2019 Medium

    Identified TEN2 and LPHN1 co-upregulation in reactive astrocytes after brain injury, with TCAP-1 eliciting calcium signaling, implicating the pathway in injury responses.

    Evidence Immunohistochemistry, RT-PCR, and intracellular calcium imaging after mechanical injury / TCAP-1 treatment

    PMID:31316338

    Open questions at the time
    • Causal role of TEN2 in the astrocyte injury response not tested by loss-of-function
    • Relationship between TCAP-1 calcium signaling and full-length TEN2 function unclear
  6. 2020 High

    Resolved how alternative splicing controls LPHN3 binding — by sterically occluding a distant binding surface — and showed this interaction selectively drives excitatory synapse formation within a TEN2–LPHN3–FLRT3 trimer.

    Evidence 2.9 Å cryo-EM of the TEN2–LPHN3 complex with mutagenesis and synapse formation assays

    PMID:32358586

    Open questions at the time
    • Structural basis of the inhibitory-synapse branch not resolved
    • Stoichiometry and assembly dynamics of the trimeric complex in cells not defined
  7. 2023 Medium

    Provided a cytoplasmic effector mechanism for inhibitory synapse function by linking TEN2 to microtubule plus ends via EB proteins to support GABAA receptor delivery.

    Evidence Live imaging, reciprocal Co-IP with EB proteins, fractionation, and GABAA receptor exocytosis assay

    PMID:37272607

    Open questions at the time
    • Whether the EB interaction is direct or bridged not established
    • Connection between the splice switch and EB recruitment not defined
  8. 2026 High

    Showed that LPHN binding and TEN2 homodimerization are mutually exclusive structural states, defining how distinct interfaces partition TEN2 into competing signaling modes.

    Evidence Cryo-EM with interface-specific surface mutagenesis, proteomics, super-resolution microscopy, and in vivo gene editing

    PMID:41991904

    Open questions at the time
    • Cellular triggers that bias TEN2 toward homodimer versus LPHN complex unknown
    • Functional consequence of homodimerization in vivo not fully defined
  9. 2026 Medium

    Confirmed coordinated upregulation of Ten-2 and ADGRL1/latrophilin-1 in reactive astrocytes during seizure-induced neurodegeneration, generalizing the injury-response role across pathologies.

    Evidence Immunohistochemistry, qRT-PCR, Fluoro-Jade C staining in a LiCl-pilocarpine status epilepticus rat model

    PMID:41930255

    Open questions at the time
    • Functional role of astrocytic TEN2–ADGRL1 in neurodegeneration not tested by perturbation
    • Whether upregulation is protective or pathogenic unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • How a single extracellular splice/dimerization switch is decoded into the opposing outcomes of excitatory versus inhibitory synapse formation, and how this integrates with cytoplasmic EB-microtubule signaling, remains unresolved.
  • No structure of the inhibitory-synapse signaling state
  • Mechanism coupling extracellular conformational state to intracellular GABAA receptor trafficking unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098631 cell adhesion mediator activity 3 GO:0008092 cytoskeletal protein binding 1 GO:0048018 receptor ligand activity 1
Localization
GO:0005886 plasma membrane 3 GO:0005576 extracellular region 1
Pathway
R-HSA-112316 Neuronal System 2 R-HSA-1266738 Developmental Biology 2 R-HSA-1500931 Cell-Cell communication 2
Complex memberships
TEN2-LPHN3-FLRT3 trimeric complex

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 Cryo-EM structure of the human TEN2 extracellular region (ECR) at 3.1 Å resolution reveals a striking similarity to bacterial Tc-toxins, featuring a large β-barrel that partially encapsulates a C-terminal domain, an immunoglobulin-like domain sealing the barrel bottom, and a β-propeller in perpendicular orientation. An alternatively spliced region within the β-propeller acts as a switch: one splice variant activates trans-cellular signaling in a latrophilin (LPHN)-dependent manner, while the other induces inhibitory postsynaptic differentiation. Single-particle cryo-EM at 3.1 Å resolution; functional assays of splice variants in trans-cellular adhesion and postsynaptic differentiation Cell High 29677516
2020 Cryo-EM structure of the TEN2–LPHN3 complex at 2.9 Å resolution shows that the N-terminal lectin domain of LPHN3 binds to the TEN2 barrel at a site distant from the alternatively spliced region. Alternative splicing regulates TEN2–LPHN3 interaction by sterically hindering access to the LPHN-binding surface rather than altering it. A trimeric TEN2–LPHN3–FLRT3 complex was also described. Mutagenesis of the LPHN-binding surface of TEN2 abolished LPHN3 interaction and impaired excitatory but not inhibitory synapse formation. Single-particle cryo-EM at 2.9 Å; site-directed mutagenesis; synapse formation assays Nature communications High 32358586
2026 Cryo-EM data of TEN2 shows that canonical Latrophilin binding is sterically incompatible with TEN2 homodimerization, making these two interactions mutually exclusive. Engineered surface mutations that specifically disrupt TEN2–TEN2 or TEN2–Latrophilin interactions confirmed distinct binding interfaces, and these binding mechanisms are conserved in TEN4. Single-particle cryo-EM; surface mutagenesis; proteomics; super-resolution microscopy; in vivo gene editing Nature communications High 41991904
2019 TEN2/Lasso is proteolytically cleaved at multiple sites and its extracellular domain is partially released into the intercellular space, especially during neuronal development. The soluble fragment of Lasso (TEN2 ECR) can diffuse and bind to LPHN1 on axonal growth cones, triggering LPHN1 redistribution on the cell surface and intracellular signaling leading to local exocytosis, causing axons to turn toward spatio-temporal Lasso gradients. LPHN1 knockout blocks this guidance effect. Affinity chromatography (isolation of TEN2/Lasso as endogenous LPHN1 ligand); live imaging of growth cone turning; LPHN1 KO epistasis Frontiers in neuroscience Medium 30967757
2023 TEN2 localizes preferentially to inhibitory postsynapses that recruit microtubule (MT) plus ends, and interacts physically with MT plus-end tracking proteins (EB proteins). This TEN2–EB interaction recruits MTs to inhibitory postsynapses and provides a platform for GABAA receptor exocytosis. Live imaging; co-immunoprecipitation (TEN2 with EB proteins); subcellular fractionation; GABAA receptor exocytosis assay eLife Medium 37272607
2013 Ten-m2 knockout (KO) mice show a specific decrease in ipsilateral retinal ganglion cell projections to the dorsal lateral geniculate nucleus and superior colliculus, most prominent in ventral retina. Reduction of EphB1 expression in ventral retina of KO mice suggests TEN-M2 interacts with the EphB1 molecular pathway downstream of Zic2 to establish ipsilateral projections required for binocular circuit formation. Visually evoked potential recordings confirmed reduced ipsilateral-to-contralateral response ratio in KOs. Ten-m2 KO mouse; anterograde/retrograde axonal tracing; immunohistochemistry (EphB1, Zic2, c-fos); visually evoked potential recordings; behavioral swim task The Journal of neuroscience High 23884953
2019 Ten-2 immunoreactivity is significantly upregulated in reactive astrocytes following mechanical brain injury, and reactive astrocytes also show intense immunoreactivity for LPHN-1 (latrophilin-1). TCAP-1 treatment of immortalized cerebellar astrocytes elicited a significant increase in intracellular calcium concentration. Immunohistochemistry; conventional RT-PCR; fluorescence microscopy with intracellular calcium indicator after TCAP-1 treatment Frontiers in neuroscience Medium 31316338
2017 siRNA-mediated knockdown of TENM2 in human SGBS preadipocytes induces UCP1 mRNA and protein expression upon adipogenic differentiation without affecting mitochondrial mass. TENM2 knockdown also increased basal and leak mitochondrial respiration, indicating that TENM2 suppresses a brown adipocyte transcriptional program in white adipocyte precursors. siRNA knockdown; qRT-PCR; western blot (UCP1); Seahorse mitochondrial respiration assay Molecular and cellular endocrinology Medium 28088466
2026 Following status epilepticus (SE) induction in rats, Ten-2, TCAP-2, and ADGRL1 (latrophilin-1) are significantly upregulated at both mRNA and protein levels in reactive astrocytes of the cerebral cortex and hippocampal CA3 region. Ten-2-LI and ADGRL1-LI colocalize in the same reactive astrocyte profiles positioned in regions of neuronal degeneration. Immunohistochemistry; quantitative RT-PCR; Fluoro-Jade C staining for neurodegeneration; LiCl-pilocarpine SE rat model Frontiers in neuroscience Medium 41930255

Source papers

Stage 0 corpus · 51 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Structural Basis for Teneurin Function in Circuit-Wiring: A Toxin Motif at the Synapse. Cell 110 29677516
2020 Expanding the genetic architecture of nicotine dependence and its shared genetics with multiple traits. Nature communications 95 33144568
2008 Mucosa-associated lymphoid tissue lymphoma: novel translocations including rearrangements of ODZ2, JMJD2C, and CNN3. Clinical cancer research : an official journal of the American Association for Cancer Research 93 18927281
2003 The murine Ten-m/Odz genes show distinct but overlapping expression patterns during development and in adult brain. Gene expression patterns : GEP 91 12915301
2000 The mammalian Odz gene family: homologs of a Drosophila pair-rule gene with expression implying distinct yet overlapping developmental roles. Developmental biology 81 10625539
2013 Ten-m2 is required for the generation of binocular visual circuits. The Journal of neuroscience : the official journal of the Society for Neuroscience 61 23884953
2020 Alternative splicing controls teneurin-latrophilin interaction and synapse specificity by a shape-shifting mechanism. Nature communications 58 32358586
2022 Genome-wide meta-analysis and omics integration identifies novel genes associated with diabetic kidney disease. Diabetologia 50 35763030
2015 Genomewide association study on chronic periodontitis in Korean population: results from the Yangpyeong health cohort. Journal of clinical periodontology 48 26212799
2020 Serious neonatal morbidities are associated with differences in DNA methylation among very preterm infants. Clinical epigenetics 36 33076993
2014 Comparative gene array analysis of progenitor cells from human paired deep neck and subcutaneous adipose tissue. Molecular and cellular endocrinology 32 25102227
2013 A genome wide study of genetic adaptation to high altitude in feral Andean Horses of the páramo. BMC evolutionary biology 31 24344830
2020 Epigenetic Changes in Islets of Langerhans Preceding the Onset of Diabetes. Diabetes 28 32816961
2011 Proteomic surfaceome analysis of mesothelioma. Lung cancer (Amsterdam, Netherlands) 26 21835491
2017 Teneurin-2 (TENM2) deficiency induces UCP1 expression in differentiating human fat cells. Molecular and cellular endocrinology 22 28088466
2015 Systems genetic analysis of hippocampal neuroanatomy and spatial learning in mice. Genes, brain, and behavior 22 26449520
2024 Single extracellular vesicle surface protein-based blood assay identifies potential biomarkers for detection and screening of five cancers. Molecular oncology 19 38194998
1983 Structural polymorphism of murine factor B controlled by a locus closely linked to the H-2 complex and demonstration of multiple alleles. Immunogenetics 15 6885117
2021 Impact of STAT1 polymorphisms on crizotinib-induced hepatotoxicity in ALK-positive non-small cell lung cancer patients. Journal of cancer research and clinical oncology 12 33387041
2018 Transethnic and race-stratified genome-wide association study of fibroid characteristics in African American and European American women. Fertility and sterility 12 30196971
2022 Trio-based exome sequencing broaden the genetic spectrum in keratoconus. Experimental eye research 11 36502923
2019 A Putative Role of Teneurin-2 and Its Related Proteins in Astrocytes. Frontiers in neuroscience 11 31316338
2021 Rare germline variants in individuals diagnosed with schizophrenia within multiplex families. Psychiatry research 10 34174581
2019 Catching Latrophilin With Lasso: A Universal Mechanism for Axonal Attraction and Synapse Formation. Frontiers in neuroscience 10 30967757
2024 Lithium response in bipolar disorder: Epigenome-wide DNA methylation signatures and epigenetic aging. European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology 9 38669938
2024 Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development. PLoS biology 7 38713721
2023 Evidence for involvement of the alcohol consumption WDPCP gene in lipid metabolism, and liver cirrhosis. Scientific reports 7 37996473
2019 The Natural History of Teneurins: A Billion Years of Evolution in Three Key Steps. Frontiers in neuroscience 7 30930727
2019 Nomenclature and Comparative Morphology of the Teneurin/TCAP/ADGRL Protein Families. Frontiers in neuroscience 7 31130838
2023 Interaction between Teneurin-2 and microtubules via EB proteins provides a platform for GABAA receptor exocytosis. eLife 6 37272607
2018 Screening of Genetic Factor in the Interaction Between Periodontitis and Metabolic Traits Using Candidate Gene Association Study (CGAS). Biochemical genetics 6 30547318
2017 Teneurin-2 presence in rat and human odontoblasts. PloS one 6 28926618
2024 Dihydroartemisinin inhibits HNSCC invasion and migration by controlling miR-195-5p expression. Heliyon 5 38961909
2025 Genetic effects on chromatin accessibility uncover mechanisms of liver gene regulation and quantitative traits. Genome research 4 40393811
2021 Identification of Putative Markers That Predict the In Vitro Senescence of Mesenchymal Progenitor Cells. Cells 4 34073789
2019 The genetic variants in calcium signaling related genes influence anti-tuberculosis drug induced liver injury: A prospective study. Medicine 4 31689868
2023 Characterization of chromatin accessibility patterns in different mouse cell types using machine learning methods at single-cell resolution. Frontiers in genetics 3 36936430
2023 Ten-m4 plays a unique role in the establishment of binocular visual circuits. Developmental neurobiology 3 37092850
2020 RNA-seq reveals downregulated osteochondral genes potentially related to tibia bacterial chondronecrosis with osteomyelitis in broilers. BMC genetics 3 32493207
1998 Generation of polymorphic markers tightly linked to the thymus enlargement loci by phenotype-directed representational difference analysis. Mammalian genome : official journal of the International Mammalian Genome Society 3 9716658
2026 Transcriptional Profiling Reveals Lineage-Specific Characteristics in ATR/CHK1 Inhibitor-Resistant Endometrial Cancer. Biomolecules 1 41594710
2025 Renal and Peripheral Blood Transcriptome Signatures That Predict Treatment Response in Proliferative Lupus Nephritis-A Prospective Study. Immunology 1 39875315
2025 Comparative Transcriptome Analysis of Hens' Livers in Conventional Cage vs. Cage-Free Egg Production Systems. Veterinary medicine international 1 40160973
2026 Novel Genomic Biomarkers Improve Post-Hematopoietic Cell Transplantation Relapse Risk Stratification for Patients With Myelodysplastic Syndromes. JCO precision oncology 0 41576307
2026 Functional hyaluronic acid/gelatin hydrogel accelerates the closure and healing of diabetic wounds. Carbohydrate polymers 0 41831972
2026 Teneurin-2 and related proteins in reactive astrocytes after status epilepticus induction in adult rats. Frontiers in neuroscience 0 41930255
2026 Structurally exclusive Teneurin complexes orchestrate divergent programs in early cortical development. Nature communications 0 41991904
2025 Bioinformatics And Experimental Insights Into Sotorasib Resistance Mechanisms in Non-small-cell Lung Cancer. Anti-cancer agents in medicinal chemistry 0 40776650
2023 Identification of two unannotated miRNAs in classic Hodgkin lymphoma cell lines. PloS one 0 36961799
2022 DNA Methylation in Noncancerous Liver Tissues as Biomarker for Multicentric Occurrence of Hepatitis C Virus-Related Hepatocellular Carcinoma. Gastro hep advances 0 39132059
2000 Fine mapping of thymus enlargement gene 1 (Ten1) in BUF/Mna rats. Pathology international 0 10792781

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