Affinage

TARS2

Threonine--tRNA ligase, mitochondrial · UniProt Q9BW92

Length
718 aa
Mass
81.0 kDa
Annotated
2026-06-10
10 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TARS2 is a mitochondrial threonyl-tRNA synthetase that supports mitochondrial translation and, separately, acts as a threonine sensor coupling nutrient availability to mTORC1 signaling (PMID:24827421, PMID:33340489). In its canonical role, TARS2 charges mitochondrial tRNAThr and clears mischarged Ser-tRNAThr, and pathogenic mutations that reduce TARS2 protein levels and aminoacylation function lower mitochondrial threonyl-tRNA and impair mitochondrial respiration, a defect rescued by re-expression of wild-type TARS2 in patient fibroblasts (PMID:24827421, PMID:34508595). Beyond aminoacylation, TARS2 interacts with inactive Rag GTPases—particularly GTP-loaded RagC—to promote GTP-loading of RagA and thereby activate mTORC1 in response to threonine, an effect specific to TARS2 and not shared by the cytoplasmic enzyme TARS (PMID:33340489). This signaling function maps to the TARS2 301–381 region, where pathogenic variants disrupt Rag binding and mTORC1 activation, with a zebrafish tars2 model recapitulating the human phenotype and downstream mTORC1 dysregulation (PMID:37454282). Excess TARS2 in cardiomyocytes perturbs mitochondrial homeostasis and drives ROS-dependent apoptosis, whereas its inhibition restores mitochondrial function and cardiac performance (PMID:42048853).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2014 High

    Established that TARS2 is required for mitochondrial respiration via its role in mitochondrial threonyl-tRNA charging, linking loss-of-function variants to a respiratory chain defect.

    Evidence Whole-exome sequencing, protein and tRNA quantification, and rescue by wild-type transcript in patient fibroblasts

    PMID:24827421

    Open questions at the time
    • Did not resolve the editing/deacylation activity of the enzyme
    • Did not address any extra-translational function
  2. 2020 High

    Revealed a moonlighting function distinct from aminoacylation: TARS2 senses threonine and activates mTORC1 through Rag GTPase engagement, separating this role from the cytoplasmic synthetase.

    Evidence Reciprocal Co-IP with Rag GTPases, RagA GTP-loading assays, and TARS2 knockout cells with mTORC1 readouts; TARS negative control

    PMID:33340489

    Open questions at the time
    • Structural basis of the TARS2–RagC interaction not defined
    • Whether aminoacylation and Rag-binding functions are mutually exclusive not resolved
  3. 2022 Medium

    Defined the dual catalytic role of TARS2 in generating Thr-tRNAThr and clearing mischarged Ser-tRNAThr, and showed pathogenic variants act by destabilizing the protein or impairing aminoacylation.

    Evidence Aminoacylation and protein stability assays with homology modeling of pathogenic variants

    PMID:34508595

    Open questions at the time
    • Editing activity inferred without full reconstitution
    • Single-lab functional characterization
  4. 2023 Medium

    Mapped the Rag-binding determinant to residues 301–381 and demonstrated in vivo that disrupting this interaction dysregulates mTORC1 signaling.

    Evidence In vitro Rag-binding assays of TARS2 variants and a zebrafish tars2 loss-of-function model with mTORC1 target analysis

    PMID:37454282

    Open questions at the time
    • Domain mapping from a single lab
    • Relative contribution of translation vs mTORC1 defects to phenotype not dissected
  5. 2026 Medium

    Linked TARS2 dosage to mitochondrial ROS and cardiomyocyte apoptosis, indicating that excess TARS2 is pathogenic in cardiac tissue.

    Evidence Gain- and loss-of-function in cardiomyocytes with mitochondrial ROS, apoptosis, and cardiac function readouts

    PMID:42048853

    Open questions at the time
    • Mechanism connecting TARS2 overexpression to ROS not defined
    • Single-lab study with limited methodological detail

Open questions

Synthesis pass · forward-looking unresolved questions
  • How the aminoacylation and mTORC1-signaling functions of TARS2 are mechanistically coordinated, and the structural basis of Rag GTPase engagement, remain unresolved.
  • No structural model of the TARS2–Rag complex
  • Whether threonine binding to the catalytic site gates Rag interaction unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003723 RNA binding 2 GO:0016740 transferase activity 2 GO:0140098 catalytic activity, acting on RNA 2 GO:0140299 molecular sensor activity 2
Localization
GO:0005739 mitochondrion 2
Pathway
R-HSA-162582 Signal Transduction 2 R-HSA-392499 Metabolism of proteins 2
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 TARS2 encodes a mitochondrial threonyl-tRNA synthetase; pathogenic mutations reduce TARS2 protein levels and mitochondrial threonyl-tRNA levels, impairing mitochondrial respiration. Expression of wild-type TARS2 transcript in mutant fibroblasts rescued the biochemical impairment of mitochondrial respiration. Whole-exome sequencing, protein quantification, tRNA level measurement, functional rescue by wild-type transcript expression in immortalized patient fibroblasts Human mutation High 24827421
2020 TARS2 interacts with inactive Rag GTPases, particularly GTP-loaded RagC, and this interaction leads to increased GTP loading of RagA, thereby activating mTORC1 in response to threonine availability. Cells lacking TARS2 are resistant to threonine-dependent mTORC1 activation, whereas cytoplasmic threonyl-tRNA synthetase TARS is not required for this effect. Co-immunoprecipitation of TARS2 with Rag GTPases, GTP-loading assays of RagA, TARS2 knockout cell lines, mTORC1 activity assays under threonine repletion/depletion conditions Molecular cell High 33340489
2022 TARS2 is responsible for generating mitochondrial Thr-tRNAThr and for clearing mischarged Ser-tRNAThr during mitochondrial translation. Pathogenic missense variants in TARS2 reduce TARS2 protein stability and/or aminoacylation function, as demonstrated by homology modeling and functional studies. Functional studies assessing TARS2 aminoacylation activity, protein stability assays, homology modeling of pathogenic variants Human molecular genetics Medium 34508595
2023 Pathogenic TARS2 variants within the TARS2 301-381 region impair binding to Rag GTPases, thereby disrupting mTORC1 activation. A zebrafish tars2 model recapitulated key features of the human phenotype and showed dysregulation of downstream mTORC1 signaling targets. In vitro binding assays of TARS2 variants to Rag GTPases, zebrafish tars2 loss-of-function model with mTORC1 downstream target analysis Genetics in medicine : official journal of the American College of Medical Genetics Medium 37454282
2026 TARS2 overexpression in cardiomyocytes disrupts mitochondrial homeostasis and triggers excessive mitochondrial reactive oxygen species (ROS) production leading to cardiomyocyte apoptosis, while genetic inhibition of TARS2 restores mitochondrial function, reduces apoptosis, and improves cardiac performance. TARS2 overexpression and genetic inhibition in cardiomyocytes, mitochondrial ROS measurement, apoptosis assays, cardiac function assessment JACC. Basic to translational science Medium 42048853

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 VARS2 and TARS2 mutations in patients with mitochondrial encephalomyopathies. Human mutation 90 24827421
2020 Mitochondrial Threonyl-tRNA Synthetase TARS2 Is Required for Threonine-Sensitive mTORC1 Activation. Molecular cell 46 33340489
2022 Elucidating the molecular mechanisms associated with TARS2-related mitochondrial disease. Human molecular genetics 19 34508595
2023 Clinical, neuroradiological, and molecular characterization of mitochondrial threonyl-tRNA-synthetase (TARS2)-related disorder. Genetics in medicine : official journal of the American College of Medical Genetics 11 37454282
2020 Novel compound heterozygous TARS2 variants in a Chinese family with mitochondrial encephalomyopathy: a case report. BMC medical genetics 9 33153448
2024 A homozygous TARS2 variant is a novel cause of syndromic neonatal diabetes. Diabetic medicine : a journal of the British Diabetic Association 6 39509107
2022 Novel TARS2 variant identified in a Chinese patient with mitochondrial encephalomyopathy and a systematic review. American journal of medical genetics. Part A 5 36218002
2022 TARS2 Variants Cause Combination Oxidative Phosphorylation Deficiency-21: A Case Report and Literature Review. Neuropediatrics 4 36150709
2026 Systems Biology Identifies TARS2 as a Cardiomyocyte Regulator of Mitochondrial Oxidative Stress in Dilated Cardiomyopathy. JACC. Basic to translational science 0 42048853
2024 TARS2 c.470 C > G is a chinese-specific founder mutation in three unrelated families with mitochondrial encephalomyopathy. Orphanet journal of rare diseases 0 39394138

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