Affinage

STRADB

STE20-related kinase adapter protein beta · UniProt Q9C0K7

Length
418 aa
Mass
47.0 kDa
Annotated
2026-06-10
26 papers in source corpus 3 papers cited in narrative 3 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

STRADB (PAPK/ILPIP) is a Ste20/germinal center kinase (GCK)-related kinase that couples stress signaling to cytoskeletal remodeling and cell survival (PMID:12574163). It forms a complex with LKB1 (Par-4) and Mo25, driving relocalization of LKB1 from the nucleus to the cytoplasm and tight junctions (PMID:14676191). STRADB is activated by hydrogen peroxide and its expression rises following growth factor withdrawal, after which it activates the stress kinases JNK1 and ERK6/p38γ; its catalytic activity is required for ERK6/p38γ activation but dispensable for JNK1 activation (PMID:12574163). Independently, STRADB interacts with XIAP and co-precipitates with TAK1 and TRAF6, strongly enhancing XIAP-mediated activation of JNK1/2/3 through a TAK1-dependent pathway and potentiating XIAP anti-apoptotic activity without altering caspase inhibition (PMID:12048196). Consistent with these signaling outputs, kinase-active STRADB induces cytoskeletal changes and confers resistance to apoptosis triggered by serum withdrawal (PMID:12574163).

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2002 Medium

    Established STRADB as a pro-survival adaptor by linking it physically and functionally to the XIAP–TAK1–TRAF6 anti-apoptotic axis, answering how it might bias cells toward survival.

    Evidence Yeast two-hybrid, reciprocal co-immunoprecipitation, JNK reporter assays, dominant-negative TAK1 epistasis, and apoptosis assays in cultured cells

    PMID:12048196

    Open questions at the time
    • Does not define the direct binding interface or whether STRADB's catalytic activity is required for XIAP/TAK1-mediated JNK activation
    • In vivo physiological relevance of the XIAP–STRADB interaction not established
    • Mechanism by which it potentiates XIAP without altering caspase inhibition unresolved
  2. 2003 High

    Defined STRADB as a GCK-related kinase activated by oxidative stress and induced upon growth factor withdrawal, connecting its catalytic activity to stress-kinase signaling and survival phenotypes.

    Evidence In vitro kinase assay with H2O2 stimulation, inducible stable transfection, kinase-dead mutagenesis, cytoskeletal imaging, and apoptosis assays in NIH3T3/hematopoietic cells

    PMID:12574163

    Open questions at the time
    • Direct physiological substrates of STRADB kinase activity not identified
    • Why ERK6/p38γ activation requires kinase activity but JNK1 activation does not is unexplained
    • Molecular link between cytoskeletal remodeling and apoptosis resistance not defined
  3. 2003 Medium

    Placed STRADB within the LKB1–Mo25 complex and showed it controls LKB1 subcellular localization, implicating it in spatial regulation of LKB1 signaling.

    Evidence Tandem affinity purification with mass spectrometry and LKB1 translocation assays in cultured cells

    PMID:14676191

    Open questions at the time
    • Whether STRADB-driven LKB1 relocalization activates MARK kinases not directly demonstrated
    • How LKB1/Mo25 binding relates to STRADB's XIAP/TAK1 and stress-kinase functions unclear
    • Stoichiometry and architecture of the STRADB–LKB1–Mo25 complex not resolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • How STRADB integrates its LKB1/Mo25 scaffolding role with its XIAP–TAK1 anti-apoptotic and stress-kinase functions, and the identity of its physiological substrates, remain unresolved.
  • No direct kinase substrate identified
  • No structural model of the STRADB–LKB1–Mo25 complex
  • Whether the LKB1-scaffolding and XIAP/JNK functions occur in the same cells or pathways is unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 2 GO:0060090 molecular adaptor activity 2 GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005829 cytosol 1
Pathway
R-HSA-162582 Signal Transduction 2 R-HSA-5357801 Programmed Cell Death 2
Complex memberships
LKB1-STRAD-Mo25 complex

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2003 STRADB (referred to as PAPK) forms a complex with LKB1 (Par-4) and Mo25, and this complex formation results in translocation of LKB1 from the nucleus to the cytoplasm and to tight junctions; the LKB1 complex may activate MARK kinases. Tandem affinity purification (TAP) of protein complexes from cultured cells followed by tandem mass spectrometry; translocation assay The Journal of biological chemistry Medium 14676191
2002 STRADB (ILPIP/ILPIPA) interacts with XIAP (identified by yeast two-hybrid), and co-precipitates with both TAK1 and TRAF6 in vivo. STRADB moderately activates JNK family members alone and strongly enhances XIAP-mediated activation of JNK1, JNK2, and JNK3 through a TAK1-dependent pathway. STRADB also moderately protects against ICE- or Fas-induced apoptosis and potentiates XIAP anti-apoptotic activity without affecting XIAP-mediated caspase inhibition. Yeast two-hybrid screening; co-immunoprecipitation; JNK activation reporter assays; dominant-negative TAK1 epistasis; apoptosis assays The Journal of biological chemistry Medium 12048196
2003 STRADB (PAPK) is a novel Ste20/germinal center kinase (GCK)-related kinase that is activated by hydrogen peroxide in vitro. PAPK-A (418 aa) expression increases after growth factor withdrawal in hematopoietic and fibroblast cells. PAPK activates JNK1 and ERK6/p38γ; kinase activity is required for ERK6/p38γ activation but not JNK1 activation. Expression of kinase-active PAPK-A in NIH3T3 cells induces cytoskeletal changes and resistance to apoptosis induced by serum withdrawal, effects requiring kinase activity. In vitro kinase assay; inducible stable transfection; cytoskeletal imaging; apoptosis assay with kinase-dead mutant The Journal of biological chemistry High 12574163

Source papers

Stage 0 corpus · 26 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1999 Structural basis of chaperone function and pilus biogenesis. Science (New York, N.Y.) 332 10446050
1993 Outer-membrane PapC molecular usher discriminately recognizes periplasmic chaperone-pilus subunit complexes. Proceedings of the National Academy of Sciences of the United States of America 170 8097321
1995 Structural polymorphism of bacterial adhesion pili. Nature 155 7816100
2003 Comprehensive proteomic analysis of human Par protein complexes reveals an interconnected protein network. The Journal of biological chemistry 152 14676191
1993 Identification of mitogen-activated protein kinase phosphorylation sequences in mammalian h-Caldesmon. FEBS letters 138 8482368
1993 Initiation of assembly and association of the structural elements of a bacterial pilus depend on two specialized tip proteins. The EMBO journal 109 8096174
1992 Phosphorylation sequences in h-caldesmon from phorbol ester-stimulated canine aortas. FEBS letters 85 1601129
2002 ILPIP, a novel anti-apoptotic protein that enhances XIAP-mediated activation of JNK1 and protection against apoptosis. The Journal of biological chemistry 47 12048196
2019 Down-regulation of long non-coding RNA HOTAIR sensitizes breast cancer to trastuzumab. Scientific reports 35 31882666
2017 Identification of transforming growth factor-beta-regulated microRNAs and the microRNA-targetomes in primary lung fibroblasts. PloS one 32 28910321
2001 An extended hydrophobic interactive surface of Yersinia pestis Caf1M chaperone is essential for subunit binding and F1 capsule assembly. Molecular microbiology 32 11123684
1994 Stable fiber-forming and nonfiber-forming chaperone-subunit complexes in pilus biogenesis. The Journal of biological chemistry 32 7909317
2020 DGCR5 Promotes Gallbladder Cancer by Sponging MiR-3619-5p via MEK/ERK1/2 and JNK/p38 MAPK Pathways. Journal of Cancer 26 32742494
2006 C-terminal repetitive motifs in Vp130 present at the unique vertex of the Chlorovirus capsid are essential for binding to the host Chlorella cell wall. Virology 20 16870225
2017 Modulation of miR-26a-5p and miR-15b-5p Exosomal Expression Associated with Clopidogrel-Induced Hepatotoxicity in HepG2 Cells. Frontiers in pharmacology 17 29311920
2007 A molecular dynamics study of pilus subunits: insights into pilus biogenesis. Journal of molecular biology 16 17306829
2003 Identification and characterization of a novel Ste20/germinal center kinase-related kinase, polyploidy-associated protein kinase. The Journal of biological chemistry 16 12574163
2013 3-Phosphoglycerate is an allosteric activator of pyruvate kinase from the hyperthermophilic archaeon Pyrobaculum aerophilum. Biochemistry 13 23879743
2004 Vp130, a chloroviral surface protein that interacts with the host Chlorella cell wall. Virology 13 14967489
2000 Evidence for donor strand complementation in the biogenesis of Haemophilus influenzae haemagglutinating pili. Molecular microbiology 13 10760135
2001 Fas-independent apoptosis induced by UVC in p53-mutated human epithelial tumor A431 cells through activation of caspase-8 and JNK/SAPK. Journal of radiation research 11 11599886
2008 Phosphorylation of movement proteins by the plasmodesmal-associated protein kinase. Methods in molecular biology (Clifton, N.J.) 8 18370285
2023 A Core Genome Multilocus Sequence Typing Scheme for Proteus mirabilis. Biomedical and environmental sciences : BES 7 37105909
2022 Investigation of cytotoxic and apoptotic effects of disodium pentaborate decahydrate on ovarian cancer cells and assessment of gene profiling. Medical oncology (Northwood, London, England) 6 36308567
2022 Genome-Wide mRNA Expression Analysis of Acute Psychological Stress Responses. MEDICC review 2 35648061
2026 Causal links of 233 metabolic markers to benign prostatic hyperplasia: Mendelian randomization and RNA-sequencing insights. Journal of the Chinese Medical Association : JCMA 0 41968426

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