| 1998 |
The cloned murine and human SMPD2 (then called nSMase) was identified as a ubiquitously expressed integral membrane protein with Mg2+-dependent neutral sphingomyelinase activity at the plasma membrane. Stable overexpression in U937 and HEK cells confirmed sphingomyelinase activity, though TNF-α stimulation produced only modest ceramide elevation without activating JNK, NFκB, or ERK1 pathways in these overexpressor lines. |
Molecular cloning, stable overexpression, in vitro SMase activity assays, signal transduction assays (JNK, NFκB, PARP cleavage) |
Proceedings of the National Academy of Sciences of the United States of America |
High |
9520418
|
| 1999 |
The originally cloned putative nSMase (SMPD2/nSMase1) was shown to function primarily as a lyso-platelet-activating factor phospholipase C (lyso-PAF-PLC) rather than as a sphingomyelinase in cells. Overexpression did not alter ceramide or sphingomyelin metabolism but caused accumulation of 1-O-alkyl-sn-glycerol, and in vitro assays demonstrated lyso-PAF and lyso-PC are substrates. |
Radiolabeling with [3H]palmitic acid/[3H]hexadecanol, in vitro substrate assays, immunoprecipitation of enzyme activity, metabolic labeling |
The Journal of biological chemistry |
High |
10608884
|
| 2000 |
The yeast SMPD2 ortholog ISC1 (YER019w) was identified as an inositol phosphosphingolipid phospholipase C (IPS-PLC). Overexpression greatly increased neutral SMase activity in a phosphatidylserine-dependent manner; ISC1 deletion eliminated neutral SMase and IPS-PLC activities and caused accumulation of complex sphingolipids, establishing ISC1 as the first enzyme in complex sphingolipid catabolism in yeast. |
Overexpression, gene deletion, in vitro enzyme activity assays, [3H]dihydrosphingosine metabolic labeling |
The Journal of biological chemistry |
High |
11006294
|
| 2002 |
Structural determinants for ISC1 activation by anionic phospholipids were defined. The second transmembrane domain (TMII) and C-terminus are required and sufficient for binding phosphatidylserine (PS), cardiolipin (CL), and phosphatidylglycerol (PG). Positively charged residues at the C-terminus mediate PS/CL/PG interaction and enzyme activation. Reconstitution experiments showed that the N-terminal catalytic domain and C-terminal region must interact for enzymatic activity, suggesting PS pulls the catalytic domain to the membrane. |
Site-directed mutagenesis, deletion mutants, lipid-protein overlay assays, GFP fusion heterologous expression, enzymatic reconstitution from separate fragments |
The Journal of biological chemistry |
High |
12244059
|
| 2002 |
ISC1-encoded inositol phosphosphingolipid phospholipase C is involved in Na+/Li+ halotolerance in yeast. Deletion of ISC1 severely impaired growth on NaCl/LiCl, reduced Na+/Li+-stimulated ENA1 (cation-extrusion ATPase) expression, and decreased Ena1p-dependent ion extrusion, placing ISC1-dependent sphingolipid hydrolysis as an early event in salt-induced ENA1 signaling. |
Gene deletion, growth assays, ENA1-lacZ reporter assays, ion extrusion measurements |
European journal of biochemistry |
Medium |
12180980
|
| 2003 |
Catalytic residues of ISC1 were defined by site-directed mutagenesis: E100, N233, and H334 are essential for catalysis. A P-loop-like domain (G162–S169) was identified; D163A and K168A completely abolished activity, while G162A, G167A, and S169A reduced Vmax without affecting Km. The P-loop-like domain is involved in Mg2+ binding and optimal catalytic efficiency, potentially interacting with the PS activator. |
Site-directed mutagenesis, in vitro enzyme kinetics (Km, Vmax, Mg2+ Ka), phosphatidylserine binding assays |
Biochemistry |
High |
12820895
|
| 2003 |
Mouse nSMase2 (SMPD2) was biochemically characterized as a bona fide neutral sphingomyelinase. The enzyme requires Mg2+, is activated by phosphatidylserine, and is inhibited by GW4869. Overexpression in MCF7 cells decreased sphingomyelin levels by 40% and increased ceramide by 60%. nSMase2 overexpression reduced cell growth by 30–40%, and TNF-α induced ~50% activation of nSMase2 in overexpressing MCF7 cells. |
Heterologous expression in isc1Δ yeast, in vitro activity assays, SM/ceramide mass measurement in MCF7 cells, [3H] labeling, cell growth assays, TNF-α stimulation |
The Journal of biological chemistry |
High |
12566438
|
| 2004 |
Endogenous nSMase2 (SMPD2) functions as a growth suppressor in MCF7 cells. At confluence, nSMase2 mRNA was upregulated ~5-fold, neutral SMase activity increased 119%, and ceramide (particularly very long chain C24:1 and C24:0 species) was elevated. siRNA knockdown of nSMase2 increased S-phase cells by 59%, prevented hypophosphorylation of retinoblastoma protein, and blocked p21(WAF1) induction. nSMase2 also redistributed from cytoplasm to plasma membrane upon confluence. |
siRNA knockdown, cell cycle analysis (flow cytometry), ceramide mass measurement, western blotting (Rb phosphorylation, p21), immunofluorescence localization |
The Journal of biological chemistry |
High |
15051724
|
| 2004 |
Expression of FLAG-tagged mouse nSMase2 (SMPD2) in primary rat hepatocytes via adenoviral gene transfer increased cellular ceramide levels and potentiated IL-1β-induced JNK phosphorylation 1.5–2-fold. This potentiation was mediated by a PP2A family phosphatase, possibly by modulating IRAK phosphorylation. nSMase2 localized to the plasma membrane in HepG2 cells. |
Adenovirus-mediated gene transfer, in vitro SMase activity assay, ceramide measurement, JNK phosphorylation assay, phosphatase inhibitor studies, immunofluorescence |
FASEB journal |
Medium |
15059969
|
| 2007 |
Yeast Isc1p (SMPD2 ortholog) localizes to the outer mitochondrial membrane as an integral membrane protein in the post-diauxic phase. Endogenous Isc1p activity was enriched in highly purified mitochondria. Mitochondria from isc1Δ cells showed 93% loss of alpha-hydroxylated phytoceramide. Functionally, isc1Δ exhibited higher respiratory-deficient cell rates at high temperature and sensitivity to hydrogen peroxide, establishing mitochondrial ceramide generation by Isc1p as important for mitochondrial function. |
Subcellular fractionation, western blotting of mitochondrial fractions, LC/MS sphingolipid profiling, respiratory competence assays, oxidative stress sensitivity assays |
Biochimica et biophysica acta |
High |
17880915
|
| 2009 |
ISC1 (SMPD2 ortholog) regulates the G2/M checkpoint in yeast. isc1Δ cells treated with hydroxyurea (HU) showed G2/M block associated with elevated Cdc28-Tyr19 phosphorylation. Sustained Swe1p (the kinase phosphorylating Cdc28-Tyr19) levels in isc1Δ cells after HU were responsible; deletion of SWE1 in isc1Δ overcame the G2/M block. A Cdc28-Y19F mutant also rescued isc1Δ from G2/M arrest, placing Isc1p as an upstream regulator of Swe1p stability. |
Flow cytometry cell cycle analysis, western blotting (Cdc28-pTyr19, Swe1p), double-mutant genetic epistasis (isc1Δ/swe1Δ, isc1Δ/cdc28-Y19F), HU sensitivity assays |
The Journal of biological chemistry |
High |
19158081
|
| 2009 |
Isc1p (SMPD2 ortholog) in yeast mitochondria is required for metabolic adaptation during the diauxic shift. isc1Δ cells showed defective aerobic respiration despite intact intrinsic mitochondrial functions (normal mtDNA, O2 consumption, membrane potential). Microarray analysis revealed failure to upregulate genes for nonfermentable carbon metabolism. The mitochondrial requirement for this nuclear gene induction overlapped with Adr1p-, Snf1p-, and Cat8p-dependent genes, but did not activate the retrograde response. |
Microarray gene expression, respiratory assays, mitochondrial membrane potential measurement, mtDNA analysis, genetic analysis with petite cells |
The Journal of biological chemistry |
Medium |
19179331
|
| 2010 |
nSMase2 (SMPD2) was identified as a critical mediator of Withanolide D-induced apoptosis in leukemia cells. siRNA knockdown of nSMase2 and the nSMase inhibitor GW4869 significantly reduced ceramide generation, MKK4 and MKK3/6 phosphorylation, and apoptosis in K562 and MOLT-4 cells, placing SMPD2 upstream of the JNK/p38 MAPK cascade in this apoptotic pathway. |
siRNA knockdown of nSMase2, pharmacological inhibition (GW4869), ceramide measurement, kinase phosphorylation assays (JNK, p38, MKK4, MKK3/6), apoptosis assays |
Molecular cancer |
Medium |
20836852
|
| 2010 |
nSMase2 (SMPD2) was established as the central in vivo mediator of cigarette smoke-induced ceramide generation and apoptosis in lung. Heterozygous nSMase2 mice showed significantly decreased ceramide after CS exposure; aSMase knockout mice maintained wild-type ceramide levels. Anti-nSMase2 siRNA abrogated CS-induced ceramide elevation and TUNEL-positive cells. N-acetyl cysteine treatment also abrogated these effects, linking oxidative stress to nSMase2 activation. |
nSMase2 heterozygous mouse model, aSMase knockout mice, in vivo siRNA, ceramide measurement in lung tissue, TUNEL assay, N-acetyl cysteine treatment |
American journal of respiratory cell and molecular biology |
High |
20448054
|
| 2011 |
ISC1 (SMPD2 ortholog) interacts with the DNA integrity checkpoint pathway to control cell morphology. isc1Δ cells under HU treatment exhibited morphological aberrations, cell-wall defects, and defects in actin depolymerization. Genetic analysis showed synthetic interactions: isc1Δ combined with mrc1Δ, tof1Δ, or csm3Δ enhanced morphological defects, while isc1Δ/rad9Δ reduced them. Swe1 and Cdk1 were identified as key mediators, and Rad53 dosage partially influenced isc1Δ morphology. |
Genetic epistasis (double mutants), flow cytometry, morphological analysis, actin staining, checkpoint gene deletions |
Genetics |
Medium |
21840863
|
| 2014 |
SMPD2 (nSMase1 in zebrafish nomenclature) is phosphorylated by JNK at Ser-270, which activates the enzyme to generate ceramide and induce apoptosis. S270A substitution blocked phosphorylation and activation; S270E (phosphomimetic) mimicked activation. JNK inhibitor SP600125 blocked nSMase1 phosphorylation and ceramide generation. Multiple stresses (heat shock, UV, H2O2, anti-Fas) induced this phosphorylation. MAPK8/9 or SMPD2 RNAi knockdown in human Jurkat T cells decreased ceramide and stress/cytokine-induced apoptosis. |
Site-directed mutagenesis (S270A, S270E), JNK inhibitor treatment, RNAi knockdown in zebrafish and human Jurkat cells, ceramide measurement, apoptosis assays, phosphorylation assays |
Cell death and differentiation |
High |
25168245
|
| 2020 |
In yeast, ISC1 (SMPD2 ortholog) is positioned within the spindle assembly checkpoint (SAC) pathway. Deletion of SAC genes (BUB1, MAD1, BIM1, KAR3) phenocopied ISC1 deletion, and spindle checkpoint genes act upstream of Isc1. ISC1 deletion mutants were sensitive to benomyl (SAC defect indicator) and failed spindle elongation in HU-treated cells (similar to bub1Δ). PP2A-Cdc55 ceramide-activated phosphatase acts downstream of Isc1p, coupling the spindle checkpoint to CDC55-mediated nuclear functions. |
Synthetic lethality analysis, gene deletion, benomyl sensitivity assays, spindle elongation imaging, epistasis with cdc55, concordance analysis |
Molecular and cellular biology |
Medium |
32205408
|
| 2022 |
In yeast, Isc1 (SMPD2 ortholog) and the PG-specific phospholipase Pgc1 functionally cooperate to regulate mitochondrial function. Deletion of PGC1 rescued the mitochondrial dysfunction (reduced PE levels and cytochrome c oxidase activity) in isc1Δ cells. The Pgc1 substrate PG inhibited Isc1 activity in vitro. Products of Isc1-mediated hydrolysis partially inhibited Pgc1 activity, establishing a cross-inhibitory feedback loop linking sphingolipid and phospholipid metabolism for mitochondrial homeostasis. |
Double-mutant genetic rescue (pgc1Δ isc1Δ), in vitro enzyme activity assays with PG substrate/inhibitor, PE and cytochrome c oxidase activity measurements |
Microbiology spectrum |
Medium |
36377885
|
| 2025 |
Overexpression of Isc1 (SMPD2 ortholog) in chronologically aged yeast prevented dramatic mitochondrial morphological changes (large rounded morphology, decreased outer membrane/matrix co-localization, decreased membrane potential) that normally occur during aging. Similar sphingolipid-dependent mitochondrial morphological transitions were observed following acute oxidative stress, suggesting SMPD2-ortholog activity promotes adaptive mitochondrial remodeling. |
Isc1 overexpression, confocal microscopy of mitochondrial morphology, pharmacological and genetic perturbation of sphingolipid biosynthesis, mitochondrial membrane potential measurements |
bioRxivpreprint |
Low |
|