Affinage

SLC35A5

UDP-sugar transporter protein SLC35A5 · UniProt Q9BS91

Length
424 aa
Mass
48.5 kDa
Annotated
2026-06-10
3 papers in source corpus 3 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SLC35A5 is a Golgi-resident nucleotide sugar transporter that contributes to the selective import of UDP-sugars required for glycoconjugate biosynthesis (PMID:30641943). It localizes exclusively to the Golgi apparatus with its C-terminus facing the cytosol (PMID:30641943), and its inactivation in HepG2 cells reduces Golgi uptake of UDP-glucuronic acid, UDP-N-acetylglucosamine, and UDP-N-acetylgalactosamine while leaving UDP-galactose transport intact, defining a substrate-selective transport role (PMID:30641943). SLC35A5 functions within a multiprotein assembly, forming homomers and heteromers with other SLC35A subfamily members (PMID:30641943). Beyond these features, the downstream consequences of SLC35A5 transport activity—including its links to chondroitin sulfate proteoglycan biosynthesis and to cellular paclitaxel resistance—have only been characterized at low confidence in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2012 Low

    Before any biochemical role was known, a functional genomics screen first connected SLC35A5 to a cellular phenotype, implicating it in drug response.

    Evidence RNAi knockdown in HapMap lymphoblastoid cell lines with paclitaxel cytotoxicity assay

    PMID:22437668

    Open questions at the time
    • Single method (RNAi + cytotoxicity) with no molecular mechanism linking SLC35A5 to paclitaxel handling
    • No connection drawn at this stage to transport activity or Golgi function
    • Not independently confirmed
  2. 2017 Low

    Interaction mapping began to place SLC35A5 within the SLC35A subfamily by showing it associates selectively with SLC35A4 but not other members.

    Evidence FLIM-FRET in vivo interaction analysis (SLC35A5 a secondary finding in an SLC35A4-focused study)

    PMID:28167211

    Open questions at the time
    • Single lab, single method; SLC35A5 was a secondary observation
    • Functional consequence of the SLC35A4–SLC35A5 interaction not established
    • No reciprocal or biochemical validation of the complex
  3. 2019 Medium

    A focused study established SLC35A5's core identity—its Golgi localization, membrane topology, substrate-selective transport activity, and oligomeric state—answering what the protein physically is and does.

    Evidence Immunofluorescence and topology assays, CRISPR-Cas9 knockout with nucleotide sugar uptake assays, and FLIM-FRET/co-IP interaction analysis in HepG2 cells

    PMID:30641943

    Open questions at the time
    • Direct transport by purified SLC35A5 not reconstituted; uptake measured in a knockout cell context
    • Stoichiometry and composition of the SLC35A multiprotein complex undefined
    • Whether SLC35A5 is the direct transporter or a regulatory complex subunit not resolved
  4. 2019 Low

    Knockout linked SLC35A5 transport activity to a downstream glycan output, connecting it to proteoglycan biosynthesis.

    Evidence CRISPR-Cas9 knockout in HepG2 cells followed by glycan analysis

    PMID:30641943

    Open questions at the time
    • Only a slight change in chondroitin sulfate proteoglycan levels observed
    • Single lab, single method
    • Causal chain from substrate transport to proteoglycan change not directly demonstrated

Open questions

Synthesis pass · forward-looking unresolved questions
  • The mechanism linking SLC35A5's nucleotide sugar transport to drug resistance and to its specific complex partners remains open.
  • No molecular mechanism connects SLC35A5 transport to paclitaxel resistance
  • The functional role of SLC35A5 heteromers with specific SLC35A members is undefined
  • No structural model or reconstituted transport assay exists

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005215 transporter activity 1
Localization
GO:0005794 Golgi apparatus 1
Partners

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2019 SLC35A5 localizes exclusively to the Golgi apparatus, with its C-terminus directed toward the cytosol, as determined by subcellular fractionation/immunofluorescence and topology experiments. Immunofluorescence localization and experimental topology assay in HepG2 cells International journal of molecular sciences Medium 30641943
2019 Inactivation of SLC35A5 in HepG2 cells decreased Golgi uptake of UDP-glucuronic acid, UDP-N-acetylglucosamine, and UDP-N-acetylgalactosamine, but did not affect UDP-galactose transport, indicating SLC35A5 contributes to selective nucleotide sugar transport into the Golgi. CRISPR-Cas9 gene knockout in HepG2 cells followed by nucleotide sugar Golgi uptake assays International journal of molecular sciences Medium 30641943
2019 SLC35A5 forms homomers as well as heteromers with other members of the SLC35A subfamily, suggesting it functions as part of a multiprotein complex. In vivo protein interaction analysis (FLIM-FRET and/or co-immunoprecipitation) in HepG2 cells International journal of molecular sciences Medium 30641943
2019 SLC35A5 knockout caused a slight increase in the level of chondroitin sulfate proteoglycans, implicating SLC35A5 in proteoglycan biosynthesis. CRISPR-Cas9 knockout in HepG2 cells followed by glycan analysis International journal of molecular sciences Low 30641943
2017 SLC35A4 (a close SLC35A subfamily member) associates with SLC35A5 but not with SLC35A2 or SLC35A3, as demonstrated by FLIM-FRET in vivo interaction analysis. FLIM-FRET in vivo interaction analysis Biochimica et biophysica acta. Molecular cell research Low 28167211
2012 RNA interference knockdown of SLC35A5 in lymphoblastoid cell lines increased cellular susceptibility to paclitaxel-induced cytotoxicity, indicating SLC35A5 mediates cellular resistance to paclitaxel. RNA interference knockdown in HapMap lymphoblastoid cell lines with paclitaxel cytotoxicity assay Pharmacogenetics and genomics Low 22437668

Source papers

Stage 0 corpus · 3 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Whole-genome studies identify solute carrier transporters in cellular susceptibility to paclitaxel. Pharmacogenetics and genomics 31 22437668
2017 An insight into the orphan nucleotide sugar transporter SLC35A4. Biochimica et biophysica acta. Molecular cell research 21 28167211
2019 SLC35A5 Protein-A Golgi Complex Member with Putative Nucleotide Sugar Transport Activity. International journal of molecular sciences 19 30641943

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