Affinage

SCN4B

Sodium channel regulatory subunit beta-4 · UniProt Q8IWT1

Length
228 aa
Mass
25.0 kDa
Annotated
2026-06-10
11 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SCN4B encodes Navβ4, a regulatory subunit of the cardiac sodium channel that also functions as a tumor-suppressive modulator of cell motility and a determinant of striatal neuron excitability (PMID:17592081, PMID:27917859). Navβ4 co-assembles with the SCN5A-encoded Nav1.5 α-subunit, and arrhythmia-associated mutations (e.g. L179F) increase late sodium current by altering channel gating, while other variants (p.Gly8Ser, p.Ala145Ser) reduce Navβ4 protein levels, both representing channel-dysregulating loss/gain-of-function mechanisms (PMID:17592081, PMID:31020414). Independently of ion channel activity, the intracellular C-terminus of Navβ4 suppresses RhoA activity to restrain cell migration and invasion, and Navβ4 inhibits epithelial-mesenchymal transition, shifting cells toward an epithelial state (increased E-cadherin, decreased N-cadherin, Vimentin, and Snail) (PMID:27917859, PMID:41685607). Consistent with a tumor-suppressive role, SCN4B is silenced by oncogenic microRNAs—miR-424-5p in colorectal cancer and miR-3175 in prostate cancer—each binding the SCN4B transcript to promote proliferation and metastasis (PMID:31785995, PMID:32833340). In the nervous system, Scn4b maintains the electrophysiological properties of striatal spiny projection neurons and modulates Huntington's disease motor, cognitive, and transcriptional phenotypes in vivo (PMID:41959367).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2007 High

    Established that Navβ4 is a functional regulatory subunit of the cardiac sodium channel, answering whether SCN4B variants can directly alter channel gating and cause arrhythmia.

    Evidence Site-directed mutagenesis of L179F-β4 with heterologous co-expression with SCN5A in HEK293 cells and late sodium current recording

    PMID:17592081

    Open questions at the time
    • Structural basis of β4 binding to Nav1.5 not resolved
    • Effect of wild-type β4 on native cardiomyocyte channels not tested in vivo
  2. 2016 High

    Revealed a non-channel function of Navβ4 by showing its intracellular C-terminus suppresses RhoA to restrain migration and invasion, decoupling its motility role from ion conduction.

    Evidence siRNA knockdown, overexpression and C-terminus domain rescue in breast cancer cells with RhoA activity assays, invasion/migration assays, xenograft metastasis models, and NaV channel blockade controls

    PMID:27917859

    Open questions at the time
    • Direct molecular link between the β4 C-terminus and RhoA regulators not defined
    • Whether C-terminus acts as adaptor or via an intermediate protein unknown
  3. 2019 Medium

    Connected specific arrhythmia-associated SCN4B variants to reduced Navβ4 protein abundance, supporting a loss-of-function disease mechanism.

    Evidence Western blotting of p.Gly8Ser and p.Ala145Ser variant proteins expressed in cells

    PMID:31020414

    Open questions at the time
    • Single method (Western blot) without electrophysiology or co-expression functional assay
    • Mechanism of reduced expression (stability vs translation) not determined
  4. 2019 Medium

    Identified SCN4B as a direct target of an oncogenic microRNA, establishing transcript-level suppression as a route to its downregulation in cancer.

    Evidence Luciferase reporter assay of the SCN4B 3'UTR with miR-424-5p plus loss-of-function and xenograft experiments in colorectal cancer cells

    PMID:31785995

    Open questions at the time
    • Downstream effectors linking SCN4B loss to proliferation not mapped
    • Whether RhoA axis mediates the colorectal phenotype not tested
  5. 2020 Medium

    Generalized microRNA-mediated SCN4B silencing to prostate cancer and linked SCN4B restoration to EMT marker reversal.

    Evidence Luciferase reporter assay with miR-3175, RT-qPCR, Western blotting of EMT markers and proliferation/migration/invasion assays in prostate cancer cells

    PMID:32833340

    Open questions at the time
    • Direct mechanism by which SCN4B controls EMT markers not defined
    • Single-lab, single-context validation
  6. 2026 Medium

    Demonstrated a neuronal role for Scn4b in maintaining striatal spiny projection neuron excitability and modulating Huntington's disease phenotypes in vivo.

    Evidence Scn4b knockout and HD-model overexpression mice analyzed by snRNA-seq, SPN electrophysiology, and behavioral motor/cognitive testing (preprint)

    PMID:41959367

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • Molecular mechanism linking Scn4b to SPN excitability changes not resolved
    • Whether effect is channel-dependent or via the non-channel pathway unknown
  7. 2026 Medium

    Confirmed SCN4B as an EMT and proliferation suppressor in lung adenocarcinoma, reinforcing its tumor-suppressive function across cancer types.

    Evidence SCN4B overexpression in A549 and H1299 cells with EMT marker Western blots, wound-healing, Transwell, viability, and apoptosis assays

    PMID:41685607

    Open questions at the time
    • Whether RhoA/C-terminus axis underlies the LUAD effect not tested
    • Single-lab, in vitro only

Open questions

Synthesis pass · forward-looking unresolved questions
  • The molecular link between the Navβ4 C-terminus and RhoA regulation, and whether this same pathway underlies its EMT-suppressive and neuronal roles, remains unresolved.
  • No direct binding partner connecting β4 C-terminus to RhoA identified
  • Unclear whether neuronal phenotypes are channel-dependent
  • No structural model of Navβ4–Nav1.5 assembly

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0060089 molecular transducer activity 1
Localization
GO:0005886 plasma membrane 1
Pathway
R-HSA-1643685 Disease 4 R-HSA-112316 Neuronal System 1
Partners
Complex memberships
cardiac voltage-gated sodium channel (Nav1.5)

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2007 The SCN4B-encoded β4 subunit (L179F missense mutation) co-assembles with the SCN5A-encoded Nav1.5 α-subunit and, when mutated, causes an ~8-fold increase in late sodium current compared to SCN5A alone and ~3-fold increase compared to SCN5A + wild-type β4, establishing β4 as a functional regulatory subunit of the cardiac sodium channel whose loss-of-function/gain-of-function directly alters channel gating. Site-directed mutagenesis of L179F-β4; heterologous expression in HEK293 cells stably expressing SCN5A; electrophysiological recording of late sodium current Circulation High 17592081
2016 In breast cancer cells, reducing β4 (SCN4B) expression increases RhoA activity, potentiates cell migration and invasiveness via an amoeboid-mesenchymal hybrid phenotype; this effect is independent of voltage-gated sodium channel (NaV) function and is specifically prevented by overexpression of the intracellular C-terminus of β4, identifying the C-terminus as the functional domain mediating RhoA suppression and migration control. siRNA knockdown and overexpression of SCN4B/β4 and C-terminus domain in breast cancer cell lines; RhoA activity assays; invasion/migration assays; in vivo xenograft metastasis models; pharmacological NaV channel blockade controls Nature communications High 27917859
2019 SCN4B variants p.Gly8Ser and p.Ala145Ser significantly reduce the expression level of the Navβ4 protein, as demonstrated by Western blotting, indicating a loss-of-function mechanism for these arrhythmia-associated variants. Western blotting of variant proteins expressed in cells Molecular genetics and genomics : MGG Medium 31020414
2019 miR-424-5p directly targets SCN4B mRNA to inhibit its expression, thereby promoting colorectal cancer cell proliferation and metastasis; this was validated by direct luciferase reporter assay showing miR-424-5p binds the SCN4B 3′UTR. Bioinformatics target prediction; luciferase reporter assay; loss-of-function experiments in HT29 and SW480 cells; mouse xenograft models Pathology, research and practice Medium 31785995
2020 miR-3175 directly targets SCN4B: knockdown of miR-3175 increased luciferase activity of an SCN4B reporter construct and increased SCN4B protein expression, while suppressing proliferation, migration, and invasion of prostate cancer cells alongside EMT marker changes (decreased N-cadherin, increased E-cadherin). Luciferase reporter assay; RT-qPCR; Western blotting; MTT, Edu, scratch, and Transwell invasion assays in prostate cancer cell lines The Kaohsiung journal of medical sciences Medium 32833340
2026 Loss of Scn4b in wild-type mice mimics Huntington's disease (HD)-associated motor/cognitive deficits and striatal gene expression signatures; conversely, Scn4b overexpression in an HD mouse model rescues motor/cognitive deficits, HD-associated gene expression signatures, and improves striatal spiny projection neuron electrophysiological properties, establishing Scn4b as a functional modulator of SPN excitability in vivo. Scn4b knockout mice; Scn4b overexpression in HD model mice; snRNA-seq; electrophysiology of striatal SPNs; behavioral motor and cognitive testing bioRxivpreprint Medium 41959367
2026 Overexpression of SCN4B in lung adenocarcinoma cell lines (A549 and H1299) suppresses EMT, as shown by upregulation of E-cadherin and downregulation of N-cadherin, Vimentin, and Snail, while also reducing cell viability, migration, and invasion and promoting apoptosis. SCN4B overexpression in LUAD cell lines; Western blotting for EMT markers; wound-healing, Transwell invasion, CCK-8 viability, and flow cytometry apoptosis assays Oncology reports Medium 41685607

Source papers

Stage 0 corpus · 11 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2007 SCN4B-encoded sodium channel beta4 subunit in congenital long-QT syndrome. Circulation 272 17592081
2013 Mutations of the SCN4B-encoded sodium channel β4 subunit in familial atrial fibrillation. International journal of molecular medicine 58 23604097
2016 SCN4B acts as a metastasis-suppressor gene preventing hyperactivation of cell migration in breast cancer. Nature communications 54 27917859
2019 miR-424-5p promotes the proliferation and metastasis of colorectal cancer by directly targeting SCN4B. Pathology, research and practice 42 31785995
2019 Significant association of rare variant p.Gly8Ser in cardiac sodium channel β4-subunit SCN4B with atrial fibrillation. Annals of human genetics 23 30821358
2018 Preserved SCN4B expression is an independent indicator of favorable recurrence-free survival in classical papillary thyroid cancer. PloS one 22 29723302
2019 Identification of rare variants in cardiac sodium channel β4-subunit gene SCN4B associated with ventricular tachycardia. Molecular genetics and genomics : MGG 8 31020414
2020 Silencing of microRNA-3175 represses cell proliferation and invasion in prostate cancer by targeting the potential tumor-suppressor SCN4B. The Kaohsiung journal of medical sciences 7 32833340
2010 Mutational analysis of SCN2B, SCN3B and SCN4B in a large Chinese Han family with generalized tonic-clonic seizure. Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology 3 20730464
2026 Suppressive role of SCN4B in the epithelial‑mesenchymal transition of lung adenocarcinoma. Oncology reports 0 41685607
2026 Scn4b Modulates Huntington's Disease Phenotype Severity in vivo. bioRxiv : the preprint server for biology 0 41959367

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