Affinage

RTTN

Rotatin · UniProt Q86VV8

Length
2226 aa
Mass
248.6 kDa
Annotated
2026-04-28
16 papers in source corpus 5 papers cited in narrative 5 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RTTN (Rotatin) is a centriolar structural protein that functions in centriole elongation, mitotic spindle integrity, and primary cilium-dependent signaling. It localizes to the inner luminal walls of centrioles, where it directly binds STIL and acts downstream of STIL-mediated centriole assembly to promote distal centriole elongation through recruitment of CEP295 (which loads POC1B and POC5) and through complex formation with the downstream effector PPP1R35 (PMID:28811500, PMID:30168418). RTTN is also required for normal mitotic spindle organization, correct spindle positioning via regulation of pericentriolar γ-tubulin, NuMA, and astral microtubule dynamics (PMID:34207628), and for primary cilium structure and BMP/WNT signaling (PMID:22939636). Biallelic RTTN mutations cause microcephaly with abnormal cortical development, consistent with its requirement for neural stem cell apico-basal polarization, rosette formation, and cell cycle fidelity in cortical organoids (PMID:22939636, PMID:39680576).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2012 Medium

    Establishing that RTTN is a cilium-associated protein whose loss disrupts cilia structure and downstream BMP/WNT signaling resolved the initial question of where and at what developmental process RTTN acts, linking it to cortical patterning defects in microcephaly patients.

    Evidence Immunofluorescence colocalization with basal bodies, patient fibroblast and NSC analysis with gene expression profiling

    PMID:22939636

    Open questions at the time
    • Mechanism by which RTTN maintains cilium structure was not defined
    • Direct protein-protein interactions were not identified
    • Whether cilia defect is secondary to a centriolar role was untested
  2. 2017 High

    Pinpointing RTTN to the inner centriolar lumen and demonstrating its direct binding to STIL, its epistatic position upstream of CEP295 in distal centriole assembly, and the functional impact of a disease-associated missense mutation answered how RTTN contributes to centriole biogenesis at a molecular level.

    Evidence Super-resolution and electron microscopy, co-immunoprecipitation, CRISPR knockout and rescue, mutant binding assays in human cells

    PMID:28811500

    Open questions at the time
    • Structural basis of the RTTN–STIL interaction is unknown
    • How RTTN activates CEP295 loading mechanistically was not resolved
    • Whether RTTN has additional partners beyond STIL at the procentriole was not tested
  3. 2018 High

    Identifying PPP1R35 as a downstream effector that forms a complex with RTTN extended the centriole elongation pathway and clarified that RTTN operates through at least two downstream branches (CEP295 and PPP1R35).

    Evidence Quantitative super-resolution microscopy, BioID proximity mapping, loss-of-function epistasis experiments

    PMID:30168418

    Open questions at the time
    • Whether the RTTN–PPP1R35 complex is direct or bridged by additional subunits is unresolved
    • Stoichiometry and regulation of the complex during the cell cycle are unknown
  4. 2021 Medium

    Demonstrating that RTTN depletion causes γ-tubulin dispersal, spindle multipolarity, mislocalized NuMA/p150Glued, and reduced astral microtubules established a second major function for RTTN in mitotic spindle organization and positioning, beyond centriole assembly.

    Evidence RNAi depletion with immunofluorescence and spindle positioning assays in human cells

    PMID:34207628

    Open questions at the time
    • Single-lab RNAi study; independent confirmation with orthogonal depletion strategies is lacking
    • Whether spindle defects are a direct consequence of centriole structural defects or reflect a separable RTTN function is untested
    • Molecular mechanism linking RTTN to NuMA cortical recruitment is unknown
  5. 2024 Medium

    Showing that RTTN-mutant iPSC-derived neural stem cells fail to polarize apico-basally, delay rosette self-organization, and exhibit aneuploidy and cell death in cortical organoids connected RTTN's centriolar and mitotic functions to a tissue-level developmental phenotype relevant to human microcephaly.

    Evidence CRISPR/Cas9-edited iPSC-derived cortical organoids with live imaging and immunostaining

    PMID:39680576

    Open questions at the time
    • Single-lab organoid model; replication in animal models or independent iPSC lines would strengthen claims
    • Relative contributions of centriole elongation defects versus spindle positioning defects to the cortical phenotype are not delineated
    • Whether RTTN's role in rosette formation depends on primary cilia signaling or is purely centrosomal is unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • A structural understanding of RTTN—including its domain architecture, how it bridges STIL binding to CEP295 and PPP1R35 activation, and whether its spindle-positioning function is mechanistically separable from its centriole elongation role—remains an open question.
  • No high-resolution structure of RTTN or its complexes exists
  • Separation-of-function mutations distinguishing centriole elongation from spindle positioning roles have not been generated
  • Regulatory inputs (phosphorylation, cell-cycle-dependent degradation) are unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0008092 cytoskeletal protein binding 2
Localization
GO:0005815 microtubule organizing center 4 GO:0005929 cilium 1
Pathway
R-HSA-1266738 Developmental Biology 2 R-HSA-1640170 Cell Cycle 2 R-HSA-1852241 Organelle biogenesis and maintenance 2
Complex memberships
RTTN–PPP1R35 complex

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 RTTN (Rotatin) colocalizes with basal bodies at the primary cilium, and patient fibroblasts with RTTN mutations show structural abnormalities of cilia and downregulation of BMP4, WNT5A, and WNT2B, linking RTTN to cilia structure/function and downstream signaling pathways required for cortical patterning. Immunofluorescence colocalization, knockdown in human fibroblasts and neural stem cells, gene expression analysis American journal of human genetics Medium 22939636
2017 RTTN is recruited to the proximal end of the procentriole at early S phase and localizes to the inner luminal walls of centrioles; it directly interacts with STIL and acts downstream of STIL-mediated centriole assembly; RTTN serves as an upstream effector of CEP295, which mediates loading of POC1B and POC5 to distal-half centrioles; CRISPR knockout causes amplification of primitive procentriole bodies lacking distal-half centriolar proteins; the disease-associated RTTN(A578P) mutation shows low affinity for STIL and blocks centriole assembly. Super-resolution and electron microscopy, Co-IP, CRISPR/Cas9 knockout, mutant protein binding assays Nature communications High 28811500
2018 PPP1R35 acts downstream of RTTN and forms a complex with RTTN; RTTN is required for distal centriole elongation and functions upstream of PPP1R35 in the centriole elongation pathway. Quantitative super-resolution microscopy, live-cell imaging, loss-of-function experiments, proximity-ligation/BioID interactome eLife High 30168418
2021 RTTN is required for normal mitotic progression and correct spindle positioning; RTTN depletion causes dispersion of pericentriolar γ-tubulin, monopolar/abnormal bipolar/multipolar spindles, altered NuMA/p150Glued congression to spindle poles, perturbed NuMA cortical localization, and reduced number and length of astral microtubules. RNAi depletion, immunofluorescence, spindle positioning assays Cells Medium 34207628
2024 RTTN is required for the self-organisation of neural stem cells (NSCs) into neural rosettes and for proper apico-basal polarization of NSCs; RTTN-mutant NSCs in cortical organoids show major cell cycle and mitotic abnormalities including aneuploidy, cell cycle arrest, and cell death, leading to delayed rosette formation and impaired organoid growth. CRISPR/Cas9-edited iPSC-derived NSCs, cortical organoids, live imaging, immunostaining PLoS genetics Medium 39680576

Source papers

Stage 0 corpus · 16 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 RTTN mutations link primary cilia function to organization of the human cerebral cortex. American journal of human genetics 58 22939636
2017 Human microcephaly protein RTTN interacts with STIL and is required to build full-length centrioles. Nature communications 39 28811500
2015 RTTN Mutations Cause Primary Microcephaly and Primordial Dwarfism in Humans. American journal of human genetics 38 26608784
2018 PPP1R35 is a novel centrosomal protein that regulates centriole length in concert with the microcephaly protein RTTN. eLife 29 30168418
2016 Expanding the phenotype of RTTN variations: a new family with primary microcephaly, severe growth failure, brain malformations and dermatitis. Clinical genetics 21 26940245
2018 Recurrent RTTN mutation leading to severe microcephaly, polymicrogyria and growth restriction. European journal of medical genetics 13 30121372
2018 Biallelic mutations in RTTN are associated with microcephaly, short stature and a wide range of brain malformations. European journal of medical genetics 11 29883675
2021 Human Microcephaly Protein RTTN Is Required for Proper Mitotic Progression and Correct Spindle Position. Cells 8 34207628
2018 A neuropathological study of novel RTTN gene mutations causing a familial microcephaly with simplified gyral pattern. Birth defects research 8 29356416
2023 Microcephaly, Short Stature, Intellectual Disability, Speech Absence and Cataract Are Associated with Novel Bi-Allelic Missense Variant in RTTN Gene: A Seckel Syndrome Case Report. Children (Basel, Switzerland) 7 37371259
2021 Exome sequencing reveled a compound heterozygous mutations in RTTN gene causing developmental delay and primary microcephaly. Saudi journal of biological sciences 6 34012324
2019 Primary microcephaly, primordial dwarfism, and brachydactyly in adult cases with biallelic skipping of RTTN exon 42. Human mutation 3 30927481
2024 A Taybi-Linder syndrome-related RTTN variant impedes neural rosette formation in human cortical organoids. PLoS genetics 2 39680576
2025 Radial Microbrain (Micrencephaly) Is Caused by a Recurrent Variant in the RTTN Gene. Neurology. Genetics 1 40151166
2023 Case Report: Novel biallelic moderately damaging variants in RTTN in a patient with cerebellar dysplasia. Frontiers in pediatrics 1 38178912
2026 Generation of the iPSC line CRNLi001-A from a patient with microcephaly and harbouring the most recurrent RTTN variant, c.2953A>G, at homozygous state. Stem cell research 0 41719742