Affinage

RNF26

E3 ubiquitin-protein ligase RNF26 · UniProt Q9BY78

Length
433 aa
Mass
47.7 kDa
Annotated
2026-06-10
11 papers in source corpus 12 papers cited in narrative 13 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/6 claims corpus-supported (83%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RNF26 is an endoplasmic reticulum-anchored RING-type E3 ubiquitin ligase that organizes endolysosomal positioning, membrane contact sites, and proteostasis, and that acts more broadly as a substrate-selective ligase shaping innate immune and oncogenic signaling (PMID:11352657, PMID:33472082, PMID:37519262). At the ER membrane it pairs with the E2 enzyme UBE2J1 to ubiquitylate SQSTM1/p62 on K435, recruiting endosomal adaptors that immobilize endosomes in the perinuclear region and route activated EGFR toward lysosomal degradation, thereby terminating EGF-induced AKT signaling (PMID:33472082). Its perinuclear confinement is achieved through binding of the C-terminus of its RING domain to vimentin intermediate filaments, restricting RNF26 to perinuclear ER subdomains where it builds membrane contact sites that retain endolysosomes and support Sec62-mediated ER-phagy recovery from ER stress (PMID:37519262). In antiviral immunity, RNF26 catalyzes K11-linked polyubiquitination of MITA/STING at K150 to shield it from RNF5-driven degradation and promote early type I interferon induction, while later restraining the response by promoting autophagic degradation of IRF3 (PMID:25254379). Across cancer contexts RNF26 directs proteasomal turnover of multiple substrates—CBX7, p57/CDKN1C, TSC1, and TRIM21—to drive cell cycle progression, mTOR activity, and TNF/NF-κB signaling, and its activity is gated by CDK4-mediated phosphorylation and PTPRZ1-mediated dephosphorylation at Y432 (PMID:34650035, PMID:35342353, PMID:38890443, PMID:39443724, PMID:39267687). RNF26 also K48-ubiquitylates the ER chaperone GRP78 to sustain ER stress, reducing MHC-I antigen presentation and elevating PD-L1 to drive immune evasion in hepatocellular carcinoma (PMID:41687462).

Mechanistic history

Synthesis pass · year-by-year structured walk · 12 steps
  1. 2001 Medium

    Established the protein architecture of RNF26, predicting E3 ligase function from its domain composition before any catalytic activity had been tested.

    Evidence Molecular cloning and sequence/domain analysis identifying an N-terminal leucine zipper and C-terminal C3HC5 RING finger

    PMID:11352657

    Open questions at the time
    • No in vitro ubiquitination assay demonstrating catalytic activity
    • No substrate or partner identified at this stage
  2. 2014 High

    Defined the first physiological substrate and a biphasic role in antiviral signaling, showing RNF26 both stabilizes STING early and dampens the response late.

    Evidence Reciprocal Co-IP, K150 site-directed ubiquitination assays, knockdown and viral infection time-course assays

    PMID:25254379

    Open questions at the time
    • Mechanism of IRF3 autophagic targeting not fully elaborated
    • E2 partner for STING ubiquitination not defined in this context
  3. 2021 High

    Identified the UBE2J1/RNF26 E2/E3 complex and its p62-K435 substrate as the machinery that anchors endosomes perinuclearly and controls EGFR/AKT signaling termination.

    Evidence Reciprocal Co-IP, K435 mutagenesis, live-cell imaging, fractionation, and AKT phosphorylation assays

    PMID:33472082

    Open questions at the time
    • Full set of endosomal adaptors recruited not enumerated
    • Structural basis of the E2/E3 pairing unresolved
  4. 2021 Medium

    Connected RNF26 to cell cycle control via a FOXM1/MuvB transcriptional axis and p57/CDKN1C degradation in bladder cancer.

    Evidence ChIP for transcriptional regulation, Co-IP, and Western blot degradation and cell cycle assays

    PMID:34650035

    Open questions at the time
    • No in vitro ubiquitination of p57 demonstrated
    • Single lab, single tumor context
  5. 2022 Medium

    Extended the substrate repertoire to CBX7, linking RNF26 to ETS1 de-repression and TNF pathway activation in ccRCC.

    Evidence Co-IP, ubiquitination assay, degradation Western blot, and proliferation assays

    PMID:35342353

    Open questions at the time
    • No in vitro reconstitution of CBX7 ubiquitination
    • Ubiquitin linkage type not defined
  6. 2023 High

    Resolved how RNF26 is spatially confined, showing RING-domain binding to vimentin retains it at perinuclear ER and enables membrane contact sites supporting ER-phagy stress recovery.

    Evidence Co-IP, live-cell imaging, CLEM/EM, KO/knockdown, domain mapping, and ER stress recovery assays

    PMID:37519262

    Open questions at the time
    • How RING-domain vimentin binding is reconciled with catalytic ubiquitin transfer unclear
    • Regulation of MCS dynamics not detailed
  7. 2023 Low

    Added RBM38 as a degradation target promoting pancreatic cancer proliferation.

    Evidence Interaction network analysis, Co-IP, and degradation Western blot with proliferation assays

    PMID:37099788

    Open questions at the time
    • No direct ubiquitination assay described
    • Single method for degradation, not independently confirmed
  8. 2024 Medium

    Revealed kinase control of RNF26, with CDK4 phosphorylation enhancing TSC1 binding and CDK4/6 inhibitors stabilizing TSC1 to inactivate mTOR.

    Evidence Mass spectrometry, GST pull-down, Co-IP, phosphorylation analysis, and xenograft assays

    PMID:38890443

    Open questions at the time
    • Phosphosite on RNF26 not specified in this axis
    • Direct in vitro ubiquitination of TSC1 not shown
  9. 2024 Medium

    Identified PTPRZ1-mediated Y432 dephosphorylation as a stabilizing input that boosts RNF26-driven TNF/NF-κB signaling in ccRCC.

    Evidence Mass spectrometry, Y432 site analysis, Co-IP, proteasome inhibitor Westerns, RNA-seq, and IHC

    PMID:39443724

    Open questions at the time
    • Kinase that phosphorylates Y432 not identified
    • Single lab, single tumor type
  10. 2024 Medium

    Added TRIM21 as a K48-linked degradation substrate with ZHX3 as a downstream effector in bladder cancer.

    Evidence Co-IP, ubiquitination assay, degradation Western blot, and knockdown/overexpression assays

    PMID:39267687

    Open questions at the time
    • Direct enzymatic reconstitution not described
    • Mechanism linking TRIM21 loss to ZHX3 upregulation incomplete
  11. 2026 High

    Linked RNF26 to tumor immune evasion by K48-ubiquitylating GRP78 to sustain ER stress, lowering MHC-I and raising PD-L1 to suppress CD8+ T cell infiltration.

    Evidence Interaction and ubiquitination assays, hepatocyte-specific Rnf26 KO mouse, 3D tumor-T cell co-culture, RNA-seq, and pharmacological ER stress inhibition

    PMID:41687462

    Open questions at the time
    • Site of GRP78 ubiquitination not mapped
    • Whether ER-positioning function contributes to the ER stress phenotype unclear
  12. 2025 Low

    Implicated RNF26 in nuclear envelope condensate homeostasis through a phenotype resembling torsin deficiency.

    Evidence Genome-wide CRISPR/Cas9 screen with high-content imaging and ML-based condensate classification (preprint)

    PMID:bio_10.1101_2025.06.07.658469

    Open questions at the time
    • Molecular mechanism of condensate formation not established
    • Preprint, single genetic screen, awaits mechanistic validation

Open questions

Synthesis pass · forward-looking unresolved questions
  • How RNF26's ER-membrane positioning/contact-site function is mechanistically coordinated with its diverse substrate-degradation roles, and how a single ligase achieves substrate selectivity across immunity, cell cycle, and proteostasis, remains unresolved.
  • No unifying model linking ER-anchored contact-site activity to cytosolic/nuclear substrate degradation
  • Determinants of substrate and ubiquitin-linkage selectivity uncharacterized
  • Structural basis of RING activity in the membrane context unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 6 GO:0016874 ligase activity 3 GO:0008092 cytoskeletal protein binding 1
Localization
GO:0005783 endoplasmic reticulum 3 GO:0005635 nuclear envelope 1
Pathway
R-HSA-392499 Metabolism of proteins 5 R-HSA-162582 Signal Transduction 3 R-HSA-168256 Immune System 3 R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-8953897 Cellular responses to stimuli 2 R-HSA-1640170 Cell Cycle 1
Complex memberships
UBE2J1/RNF26 E2/E3 ubiquitylation complex

Evidence

Reading pass · 13 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2001 RNF26 encodes a 433 amino acid protein with an N-terminal leucine zipper domain and a C-terminal RING finger domain (C3HC5 subfamily), consistent with E3 ubiquitin ligase activity. Molecular cloning, sequence analysis, domain characterization Biochemical and biophysical research communications Medium 11352657
2014 RNF26 functions as an E3 ubiquitin ligase that promotes K11-linked polyubiquitination of MITA/STING at lysine 150, thereby protecting MITA from RNF5-mediated K48-linked polyubiquitination and proteasomal degradation, which is required for efficient type I IFN induction early after viral infection. Co-immunoprecipitation, ubiquitination assays, site-directed mutagenesis (K150), knockdown experiments, viral infection assays PLoS pathogens High 25254379
2014 RNF26 limits excessive type I IFN response at the late phase of viral infection by promoting autophagic degradation of IRF3. Knockdown experiments, viral infection time-course assays, autophagy pathway analysis PLoS pathogens Medium 25254379
2021 The ER-embedded E2/E3 ubiquitylation complex UBE2J1/RNF26 modifies SQSTM1/p62 on lysine 435 to recruit endosomal adaptors, immobilizing endosomes in the perinuclear region and promoting trafficking of activated EGFR to lysosomes, thereby facilitating termination of EGF-induced AKT signaling. Co-immunoprecipitation, ubiquitylation assays, site-directed mutagenesis (K435), live-cell imaging, subcellular fractionation, signaling assays (AKT phosphorylation) Cell reports High 33472082
2021 FOXM1 transcriptionally upregulates RNF26 through the MuvB complex, and upregulated RNF26 in turn degrades p57 (CDKN1C) to promote cell cycle progression in bladder cancer. Chromatin immunoprecipitation (transcriptional regulation), co-immunoprecipitation, Western blot (protein degradation assay), cell cycle analysis Cell death & disease Medium 34650035
2022 RNF26 promotes ubiquitination and proteasomal degradation of CBX7, and CBX7 loss de-represses ETS1 to activate the TNF signaling pathway, promoting ccRCC tumor growth. Co-immunoprecipitation, ubiquitination assay, Western blot (degradation), proliferation assays International journal of biological sciences Medium 35342353
2023 RNF26 binds perinuclear vimentin intermediate filaments via the C-terminus of its RING domain, which restricts RNF26 to perinuclear ER subdomains and enables spatial retention of endolysosomes through RNF26-mediated membrane contact sites (MCS), facilitating efficient recovery from ER stress via the Sec62-mediated ER-phagy pathway. Co-immunoprecipitation, live-cell imaging, CLEM/electron microscopy, RNF26 and vimentin knockout/knockdown, domain mapping, ER stress assays The EMBO journal High 37519262
2023 RNF26 promotes degradation of RBM38 to enhance pancreatic cancer cell proliferation. Protein-protein interaction network analysis, co-immunoprecipitation, Western blot (degradation assay), cell proliferation assays Pancreas Low 37099788
2024 CDK4 phosphorylates RNF26 to enhance its interaction with TSC1; CDK4/6 inhibitors dephosphorylate RNF26, disrupting the RNF26-TSC1 interaction and stabilizing TSC1, thereby inactivating the mTOR signaling pathway. RNF26 functions as an E3 ligase for TSC1. Mass spectrometry, co-immunoprecipitation, GST pull-down assays, Western blot, phosphorylation analysis, xenograft assays British journal of cancer Medium 38890443
2024 PTPRZ1 dephosphorylates RNF26 at Y432, stabilizing RNF26 protein by preventing its proteasomal degradation; stabilized RNF26 activates the TNF/NF-κB signaling pathway to promote ccRCC proliferation and angiogenesis. Mass spectrometry, co-immunoprecipitation, site-directed analysis (Y432), Western blot (proteasome inhibitor experiments), RNA sequencing, immunohistochemical staining Oncogene Medium 39443724
2024 RNF26 promotes K48-linked polyubiquitination and degradation of TRIM21, and loss of TRIM21 leads to upregulation of ZHX3 as a downstream effector in bladder cancer. Co-immunoprecipitation, ubiquitination assay, Western blot (degradation), knockdown/overexpression functional assays American journal of cancer research Medium 39267687
2026 RNF26 promotes K48-linked polyubiquitination and degradation of the ER chaperone GRP78, inducing sustained ER stress, which reduces MHC-I antigen presentation and increases PD-L1 expression, thereby suppressing CD8+ T cell infiltration and driving immune evasion in hepatocellular carcinoma. Molecular interaction assays, ubiquitination assays, hepatocyte-specific Rnf26 knockout mouse model, 3D tumor-T cell co-culture, RNA-seq, pharmacological ER stress inhibition Drug resistance updates High 41687462
2025 RNF26 deletion produces nuclear envelope condensates that phenocopy hallmarks of torsin deficiency, linking RNF26 to nuclear condensate homeostasis. Genome-wide CRISPR/Cas9 screen, high-content imaging, machine learning-based condensate phenotype classification bioRxivpreprint Low bio_10.1101_2025.06.07.658469

Source papers

Stage 0 corpus · 11 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 RNF26 temporally regulates virus-triggered type I interferon induction by two distinct mechanisms. PLoS pathogens 177 25254379
2001 Molecular cloning and characterization of RNF26 on human chromosome 11q23 region, encoding a novel RING finger protein with leucine zipper. Biochemical and biophysical research communications 63 11352657
2021 The ER-embedded UBE2J1/RNF26 ubiquitylation complex exerts spatiotemporal control over the endolysosomal pathway. Cell reports 34 33472082
2021 The FOXM1/RNF26/p57 axis regulates the cell cycle to promote the aggressiveness of bladder cancer. Cell death & disease 33 34650035
2022 The RNF26/CBX7 axis modulates the TNF pathway to promote cell proliferation and regulate sensitivity to TKIs in ccRCC. International journal of biological sciences 22 35342353
2023 RNF26 binds perinuclear vimentin filaments to integrate ER and endolysosomal responses to proteotoxic stress. The EMBO journal 20 37519262
2024 RNF26-mediated ubiquitination of TRIM21 promotes bladder cancer progression. American journal of cancer research 6 39267687
2023 RNF26 Promotes Pancreatic Cancer Proliferation by Enhancing RBM38 Degradation. Pancreas 3 37099788
2024 CDK4/6 inhibitors dephosphorylate RNF26 to stabilize TSC1 and increase the sensitivity of ccRCC to mTOR inhibitors. British journal of cancer 2 38890443
2024 PTPRZ1 dephosphorylates and stabilizes RNF26 to reduce the efficacy of TKIs and PD-1 blockade in ccRCC. Oncogene 1 39443724
2026 RNF26 regulating tumor immunogenicity of hepatocellular carcinoma by degrading GRP78 and instigating ER stress. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 0 41687462

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