Affinage

RAP2C

Ras-related protein Rap-2c · UniProt Q9Y3L5

Length
183 aa
Mass
20.7 kDa
Annotated
2026-06-10
16 papers in source corpus 11 papers cited in narrative 11 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RAP2C is a plasma membrane-localized Ras-family small GTPase that functions as a signaling node converting upstream GEF and cAMP inputs into control of cytoskeletal organization, MAPK activity, and cell fate decisions (PMID:16213650, PMID:23885123). Biochemically it binds GTP in a Mg2+-dependent manner and cycles between nucleotide states with slower GDP release and lower relative GTP affinity than Rap2B, and its C-terminal CAAX motif directs it to the plasma membrane (PMID:16213650). In epithelia, a JAM-A/ZO-2/afadin scaffold together with the exchange factor PDZ-GEF1 activates RAP2C, which then controls apical actomyosin contraction via RhoA and nonmuscle myosin phosphorylation to maintain paracellular barrier integrity (PMID:23885123). RAP2C also relays cAMP signaling through an EPAC1/2→RAP2C→MAP4K7→LATS1/2 cascade that phosphorylates YAP/TAZ to exclude them from the nucleus and restrain fibroblast proliferation, contraction, and ECM production (PMID:34046891). Across multiple cancer and disease cell types RAP2C activates MAPK/ERK signaling to promote proliferation and migration and suppress apoptosis, and it is a recurrent direct target of inhibitory microRNAs including miR-188-5p, miR-195, and miR-200c-3p (PMID:31541458, PMID:33302819, PMID:34676879). Additional roles include B-cell receptor–induced MTOC reorientation and F-actin remodeling (PMID:29457987), and an interaction with DRP1 that increases DRP1 S637 phosphorylation to modulate mitochondrial fusion and oxidative phosphorylation (PMID:36214632).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 2005 High

    Established RAP2C as a genuine GTP-binding Rap-family GTPase with distinct nucleotide-handling kinetics, defining its basic biochemical identity and membrane localization.

    Evidence In vitro GTP-binding and nucleotide exchange assays with recombinant protein plus subcellular localization in eukaryotic cells

    PMID:16213650

    Open questions at the time
    • No GEF or GAP partners identified in this work
    • Downstream effectors and cellular function not addressed
  2. 2007 Medium

    Linked RAP2C overexpression to transcriptional output, providing an early hint of downstream signaling activity via SRE.

    Evidence SRE-luciferase reporter assay and overexpression localization in COS-7 cells

    PMID:17447155

    Open questions at the time
    • Single reporter readout without pathway dissection
    • Cytoplasmic localization on overexpression unexplained relative to membrane targeting
  3. 2013 High

    Defined the upstream activating module (JAM-A/ZO-2/afadin/PDZ-GEF1) and a concrete epithelial function for RAP2C in barrier integrity through actomyosin contraction.

    Evidence Reciprocal Co-IP, multiple siRNA knockdowns with permeability and RhoA/myosin readouts, plus JAM-A-deficient mouse

    PMID:23885123

    Open questions at the time
    • Direct GEF action on RAP2C not reconstituted in vitro
    • Mechanism connecting RAP2C activation to RhoA not resolved
  4. 2018 Medium

    Showed RAP2C drives cell motility independent of proliferation in osteosarcoma via MMP2/TIMP2 and Akt signaling.

    Evidence Gain/loss-of-function with Transwell assays, gelatin zymography, and western blot

    PMID:29552178

    Open questions at the time
    • Direct effectors linking RAP2C to Akt not identified
    • Single cell-line context
  5. 2018 Medium

    Implicated RAP2C in immune cytoskeletal polarity by linking it to BCR-induced MTOC reorientation and F-actin remodeling.

    Evidence siRNA knockdown with microscopy-based MTOC and actin imaging in A20 B cells

    PMID:29457987

    Open questions at the time
    • Effector mediating MTOC reorientation unknown
    • GEF activating RAP2C in B cells not identified
  6. 2020 Medium

    Established RAP2C as a MAPK-pathway activator controlling proliferation, migration, and apoptosis, and identified it as a direct target of tumor-suppressive miRNAs.

    Evidence Dual-luciferase miRNA target validation plus knockdown/overexpression with phenotypic and western readouts in breast and small cell lung cancer cells (and an in vivo tumor model)

    PMID:31541458 PMID:33302819

    Open questions at the time
    • Direct molecular link between RAP2C and MAPK kinases not defined
    • Whether GTP-loading state controls MAPK output untested
  7. 2021 Medium

    Positioned RAP2C as an essential intermediate in a cAMP-driven Hippo cascade controlling YAP/TAZ localization and fibroblast behavior.

    Evidence Sequential siRNA epistasis (EPAC1/2→RAP2C→MAP4K7→LATS1/2) with YAP/TAZ localization and fibroblast functional assays

    PMID:34046891

    Open questions at the time
    • Direct RAP2C–MAP4K7 binding not demonstrated
    • Mechanism of cAMP/EPAC activation of RAP2C not reconstituted
  8. 2021 Medium

    Extended RAP2C→ERK signaling to nucleus pulposus pathophysiology, linking it to apoptosis, inflammation, and ECM degradation.

    Evidence miRNA luciferase target validation, knockdown, and ERK inhibitor epistasis in LPS-treated NP cells

    PMID:34676879

    Open questions at the time
    • Direct effector coupling RAP2C to ERK unidentified
    • Single disease-cell context
  9. 2022 Medium

    Revealed a non-canonical RAP2C role in mitochondrial dynamics via DRP1 interaction, regulated by the lncRNA LENOX.

    Evidence Co-IP of RAP2C–DRP1, DRP1 S637 phosphorylation, mitochondrial morphology and OXPHOS measurements, and combinatorial drug treatment in melanoma cells

    PMID:36214632

    Open questions at the time
    • Whether RAP2C directly phosphorylates or recruits a kinase to DRP1 unresolved
    • GTP-loading dependence of the DRP1 interaction untested
  10. 2024 Medium

    Identified MAP4K4 as a direct RAP2C partner mediating MAPK-driven cardiomyocyte apoptosis under hypoxia/reoxygenation.

    Evidence Co-IP and co-immunofluorescence, double knockdown/overexpression epistasis, and apoptosis assays in H9C2 cells and rat I/R model (preprint)

    PMID:bio_10.1101_2024.12.04.626922

    Open questions at the time
    • Preprint, single lab, awaits peer review
    • Whether MAP4K4 is the general MAPK link across other RAP2C contexts unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • The GEF/GAP machinery and direct effector that couple RAP2C nucleotide state to MAPK/ERK activation across its many cellular contexts remain undefined.
  • No unified structural or biochemical mechanism linking active RAP2C to specific MAP kinases
  • Context-specificity determinants between barrier, Hippo, MAPK, and mitochondrial roles unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003924 GTPase activity 1
Localization
GO:0005829 cytosol 1 GO:0005886 plasma membrane 1
Pathway
R-HSA-162582 Signal Transduction 3

Evidence

Reading pass · 11 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2005 RAP2C is a GTP-binding protein (fifth member of the Rap family) that binds GTP in a Mg2+-dependent manner, with slower GDP release and lower relative GTP/GDP affinity compared to Rap2B. When expressed in eukaryotic cells, RAP2C localizes to the plasma membrane via its C-terminal CAAX motif. In vitro GTP-binding assay with recombinant purified protein, nucleotide exchange kinetics, anti-Rap2 antibody recognition, and eukaryotic cell expression with subcellular localization Biochimie High 16213650
2007 Overexpression of RAP2C in HEK293T cells activates transcriptional activity of the serum response element (SRE). RAP2C protein localizes to the cytoplasm when overexpressed in COS-7 cells. Reporter gene assay (luciferase under SRE promoter) and subcellular localization by overexpression in COS-7 cells Molecular biology reports Medium 17447155
2013 JAM-A associates directly with ZO-2 and indirectly with afadin; this complex, together with PDZ-GEF1, activates Rap2c. Activated Rap2c regulates epithelial barrier function by controlling apical actomyosin contraction via RhoA activity and nonmuscle myosin phosphorylation. siRNA knockdown of JAM-A, ZO-2, afadin, PDZ-GEF1, or Rap2c each enhanced paracellular permeability. Co-immunoprecipitation, siRNA knockdown with paracellular permeability assay, RhoA activity assay, myosin phosphorylation (western blot), JAM-A-deficient mouse model Molecular biology of the cell High 23885123
2018 Rap2c overexpression in human osteosarcoma cells promotes migration and invasion, increases MMP2 activity, decreases TIMP2 protein levels, and increases Akt phosphorylation. Knockdown of Rap2c inhibits migration and invasion. Rap2c has no effect on osteosarcoma cell proliferation or apoptosis. Overexpression and siRNA knockdown with Transwell migration/invasion assay, gelatin zymography (MMP2 activity), western blotting (TIMP2, phospho-Akt) Oncology letters Medium 29552178
2018 Rap2c is the only Rap2 isoform expressed in A20 B cells, and its depletion impairs BCR-induced MTOC reorientation toward the antigen contact site as well as F-actin remodeling that supports MTOC polarization. siRNA knockdown, microscopy-based MTOC polarization assay, F-actin imaging in B cells stimulated via BCR Small GTPases Medium 29457987
2021 In human lung fibroblasts, GPCR agonism (including dopamine D1 receptor) activates a cAMP→EPAC1/2→RAP2c→MAP4K7→LATS1/2 signaling cascade that phosphorylates YAP/TAZ, causing their nuclear exclusion. RAP2c is identified as an essential intermediate in this cascade; its modulation affects fibroblast proliferation, contraction, and extracellular matrix production. siRNA knockdown of EPAC1/2, RAP2c, and MAP4K7 in human lung fibroblasts; YAP/TAZ phosphorylation and nuclear/cytoplasmic localization assays; fibroblast functional assays (proliferation, contraction, ECM production) Journal of cellular physiology Medium 34046891
2022 The lncRNA LENOX promotes association of RAP2C GTPase with the mitochondrial fission regulator DRP1, increasing DRP1 S637 phosphorylation, mitochondrial fusion, and oxidative phosphorylation in melanoma cells. Combined silencing of LENOX and RAP2C synergizes with MAPK inhibitors to eradicate melanoma cells. Co-immunoprecipitation (RAP2C–DRP1 interaction), DRP1 S637 phosphorylation by western blot, mitochondrial morphology imaging, OXPHOS measurement, siRNA knockdown and combinatorial drug treatment Cancer research Medium 36214632
2020 RAP2C activates the MAPK signaling pathway in breast cancer cells to decrease apoptosis and promote proliferation and migration. miR-188-5p directly targets Rap2c mRNA (confirmed by dual-luciferase assay) to suppress its expression and inhibit MAPK signaling. Dual-luciferase reporter assay (miR-188-5p targeting Rap2c 3'-UTR), RAP2C knockdown/overexpression with proliferation, apoptosis, and migration assays, western blot for MAPK pathway components Journal of cellular physiology Medium 31541458
2020 RAP2C knockdown in small cell lung cancer cells suppresses MAPK signaling pathway activation, inhibits proliferation, and promotes apoptosis. miR-195 binds Rap2c mRNA (confirmed by luciferase reporter assay) and inhibits its expression, thereby inhibiting MAPK signaling. Luciferase reporter assay, RAP2C knockdown/overexpression, western blot (MAPK pathway, Bax, Bcl-2), CCK-8 proliferation assay, flow cytometry (apoptosis), in vivo subcutaneous tumor model Technology in cancer research & treatment Medium 33302819
2021 RAP2C activates ERK signaling in nucleus pulposus cells to promote apoptosis, inflammatory cytokine production, and ECM degradation. miR-200c-3p directly targets RAP2C mRNA (luciferase assay), and RAP2C knockdown or ERK inhibition reverses these effects. Luciferase reporter assay, RAP2C knockdown, ERK inhibitor (SCH772984), western blot, flow cytometry (apoptosis), cytokine measurement in LPS-treated NP cells Molecular medicine reports Medium 34676879
2024 RAP2C interacts with MAP4K4 (interaction confirmed by co-immunoprecipitation and co-immunofluorescence). H/R increases RAP2C–MAP4K4 interaction and activates the MAPK pathway (phospho-JNK, phospho-P38, phospho-ERK) to promote cardiomyocyte apoptosis. Ischemic postconditioning reduces RAP2C and MAP4K4 levels and their interaction. MAP4K4 knockdown attenuates the pro-apoptotic and MAPK-activating effects of RAP2C overexpression. Co-immunoprecipitation, co-immunofluorescence, RAP2C knockdown/overexpression, MAP4K4 knockdown, western blot (phospho-MAPK components), apoptosis assay in H9C2 cells and rat I/R model bioRxivpreprint Medium bio_10.1101_2024.12.04.626922

Source papers

Stage 0 corpus · 16 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 JAM-A associates with ZO-2, afadin, and PDZ-GEF1 to activate Rap2c and regulate epithelial barrier function. Molecular biology of the cell 103 23885123
2005 Identification and biochemical characterization of Rap2C, a new member of the Rap family of small GTP-binding proteins. Biochimie 43 16213650
2020 Overexpression of circRNA_100290 promotes the progression of laryngeal squamous cell carcinoma through the miR-136-5p/RAP2C axis. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 39 32014687
2019 MicroRNA-188-5p promotes apoptosis and inhibits cell proliferation of breast cancer cells via the MAPK signaling pathway by targeting Rap2c. Journal of cellular physiology 39 31541458
2022 The LncRNA LENOX Interacts with RAP2C to Regulate Metabolism and Promote Resistance to MAPK Inhibition in Melanoma. Cancer research 33 36214632
2021 Serum long non‑coding RNA NNT‑AS1 protected by exosome is a potential biomarker and functions as an oncogene via the miR‑496/RAP2C axis in colorectal cancer. Molecular medicine reports 33 34132374
2018 Ras-related protein Rap2c promotes the migration and invasion of human osteosarcoma cells. Oncology letters 22 29552178
2007 Cloning and characterization of the human gene RAP2C, a novel member of Ras family, which activates transcriptional activities of SRE. Molecular biology reports 20 17447155
2021 GPCR-mediated YAP/TAZ inactivation in fibroblasts via EPAC1/2, RAP2C, and MAP4K7. Journal of cellular physiology 19 34046891
2021 MicroRNA‑200c‑3p suppresses intervertebral disc degeneration by targeting RAP2C/ERK signaling. Molecular medicine reports 10 34676879
2020 microRNA-195 Promotes Small Cell Lung Cancer Cell Apoptosis via Inhibiting Rap2C Protein-Dependent MAPK Signal Transduction. Technology in cancer research & treatment 9 33302819
2017 Spinal cord ischemia-reperfusion causes damage of neurocyte by inhibiting RAP2C. Neurological research 8 28714326
2018 The Rap2c GTPase facilitates B cell receptor-induced reorientation of the microtubule-organizing center. Small GTPases 4 29457987
2021 Erratum: Ras-related protein Rap2c promotes the migration and invasion of human osteosarcoma cells. Oncology letters 1 33907572
2025 Stability of G/C DNA Tetraplexes at Physiological pH Formed at the Promoter-UTR Intersection of the RAP2C Gene: Structural Multitude of a G/C Rich Genomic Segment. ACS omega 0 41280817
2025 Multiformity of a G/C Rich Segment at the Promoter-UTR Intersection of RAP2C Gene: Structural Validation by Circular Dichroism. ACS omega 0 41280826

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