Affinage

RAP1GAP2

Rap1 GTPase-activating protein 2 · UniProt Q684P5

Length
730 aa
Mass
80.1 kDa
Annotated
2026-04-28
13 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RAP1GAP2 is a Rap1-specific GTPase-activating protein that terminates Rap1 signaling to regulate integrin-mediated cell adhesion, platelet dense granule secretion, and axon outgrowth. In platelets, RAP1GAP2 GAP activity is modulated by phosphorylation: agonist-stimulated phosphorylation of Ser9 recruits 14-3-3 proteins to attenuate RAP1GAP2-mediated inhibition of adhesion, while cGKI/cAKI-mediated phosphorylation of the adjacent Ser7 disrupts 14-3-3 binding, restoring the capacity of RAP1GAP2 to suppress Rap1 (PMID:15632203, PMID:18039662). RAP1GAP2 forms a trimeric complex with synaptotagmin-like protein 1 (Slp1) and Rab27 through a C-terminal TKXT motif, and this interaction is required for RAP1GAP2-dependent augmentation of dense granule secretion in permeabilized platelets (PMID:19528539). In neurons, Rap1gap2 limits Rap1-dependent axon outgrowth and branching, as demonstrated by gain- and loss-of-function studies in olfactory sensory neurons (PMID:22732430).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2005 High

    Identification of RAP1GAP2 as a platelet-expressed Rap1 GAP and discovery of its phosphorylation by cGKI on Ser7 established the first molecular link between cGMP-dependent inhibitory signaling and Rap1 inactivation in platelets.

    Evidence cDNA cloning from human platelet library, transfection-based GAP assays, in vitro kinase assay with cGKI, and site-directed mutagenesis of Ser7

    PMID:15632203

    Open questions at the time
    • Functional consequence of Ser7 phosphorylation on GAP activity or platelet function was not determined
    • The mechanism by which RAP1GAP2 is recruited to Rap1 at the platelet membrane was unknown
  2. 2006 Medium

    Demonstrating that the GoLoco motif of RAP1GAP2 is functionally inactive toward Gαi/o ruled out a dual-function model in which RAP1GAP2 might simultaneously regulate both Rap1 and heterotrimeric G-protein signaling.

    Evidence In vitro GDI activity measurement and Lys75Arg mutagenesis

    PMID:16949794

    Open questions at the time
    • Only a single study; independent confirmation of GoLoco inactivity is lacking
    • Whether the GoLoco motif has any non-canonical function (e.g., protein–protein interaction scaffold) was not tested
  3. 2007 High

    Discovery that 14-3-3 binds phospho-Ser9 of RAP1GAP2 and that Ser7 phosphorylation by cGKI/cAKI disrupts this interaction resolved how opposing platelet-activating and -inhibiting signals converge on RAP1GAP2 to control cell adhesion.

    Evidence Endogenous co-immunoprecipitation in platelets, in vitro phosphorylation, and cell adhesion assays with pharmacological inhibition of cGK/cAK

    PMID:18039662

    Open questions at the time
    • 14-3-3 binding did not alter catalytic GAP activity in vitro, leaving the mechanism by which it attenuates adhesion inhibition unresolved
    • In vivo relevance of the Ser7/Ser9 phospho-switch in thrombosis or hemostasis was not tested
  4. 2009 High

    Identification of the RAP1GAP2–Slp1–Rab27 trimeric complex and its requirement for dense granule secretion revealed a GAP-independent effector function of RAP1GAP2 in platelet exocytosis.

    Evidence Yeast two-hybrid screen, endogenous co-IP in platelets, TKXT motif deletion mapping, and reconstituted secretion assay with purified proteins in permeabilized platelets

    PMID:19528539

    Open questions at the time
    • Whether GAP catalytic activity and Slp1 binding are coordinated or independent during platelet activation is unknown
    • Structural basis of the TKXT–C2A interaction has not been determined
  5. 2012 Medium

    Demonstrating that Rap1gap2 restricts Rap1-dependent axon outgrowth in olfactory sensory neurons extended its functional role beyond platelets to neuronal development.

    Evidence Overexpression and siRNA knockdown in Neuro-2a cells and in vivo olfactory sensory neuron model with neurite length quantification

    PMID:22732430

    Open questions at the time
    • Downstream effectors linking Rap1 inactivation to cytoskeletal remodeling in neurons were not identified
    • Findings are from a single lab; genetic knockout confirmation is lacking

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the structural basis of RAP1GAP2 catalysis and regulation, the in vivo consequences of RAP1GAP2 loss for hemostasis and neuronal circuit formation, and whether the Slp1/Slp2-a interactions represent tissue-specific modes of RAP1GAP2 regulation.
  • No knockout mouse phenotype has been reported
  • No structural model of the GAP domain or regulatory phospho-switch exists
  • Relative contributions of GAP activity versus Slp1-mediated secretion function in platelet physiology are unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0060090 molecular adaptor activity 1
Localization
GO:0005829 cytosol 1 GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-109582 Hemostasis 3 R-HSA-162582 Signal Transduction 2
Complex memberships
RAP1GAP2–Slp1–Rab27 complex

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2005 RAP1GAP2 is a GTPase-activating protein (GAP) for Rap1 expressed in human platelets, encoded by a 715-amino acid protein with at least 3 splice variants. It exhibits strong GTPase-stimulating activity toward Rap1 in transfected cells, colocalizes with Rap1 in platelets, and is phosphorylated by cGMP-dependent protein kinase I (cGKI) exclusively on serine 7, a residue present only in platelet splice variants. 5'-RACE cDNA cloning, transfection-based GAP activity assay, immunofluorescence colocalization, in vitro phosphorylation assay with cGKI, site-directed mutagenesis Blood High 15632203
2007 14-3-3 proteins interact with phosphorylated serine 9 at the N-terminus of RAP1GAP2 in platelets. Platelet activation by ADP and thrombin enhances Ser9 phosphorylation and increases 14-3-3 binding, whereas inhibition by nitric oxide and prostacyclin disrupts 14-3-3 binding via cGMP- and cAMP-dependent protein kinases that phosphorylate Ser7 (adjacent to the 14-3-3 binding site). 14-3-3 binding does not alter GAP catalytic activity in vitro but attenuates RAP1GAP2-mediated inhibition of cell adhesion. Co-immunoprecipitation, in vitro phosphorylation assay, cell adhesion assay, pharmacological inhibition of cGK/cAK The Journal of biological chemistry High 18039662
2009 RAP1GAP2 interacts with synaptotagmin-like protein 1 (Slp1) through a TKXT motif (T524-K525-X-T527) in its C-terminus binding to the C2A domain of Slp1. RAP1GAP2, Slp1, and Rab27 form a trimeric complex in transfected cells and in human platelets. Purified RAP1GAP2 augments dense granule secretion in permeabilized platelets, and deletion of the Slp1-binding TKXT motif abolishes this effect, indicating RAP1GAP2 modulates platelet dense granule secretion by binding to Slp1. Yeast two-hybrid screening, Co-IP in COS-1/HeLa cells and human platelets, deletion/truncation mapping, permeabilized platelet granule secretion assay with purified proteins Blood High 19528539
2006 The GoLoco motif of RAP1GAP2b/c is functionally inactive: it lacks GDI activity toward Gαi/o subunits and cannot interact with Gα(i1). This is partly attributable to a lysine (Lys-75) at the position normally occupied by arginine in canonical GoLoco motifs; however, mutation of Lys-75 to arginine could not restore Gα interaction, indicating additional sequence determinants contribute to its inactivity. Biophysical binding assay (GDI activity measurement), site-directed mutagenesis (Lys75Arg), primary sequence analysis Cellular signalling Medium 16949794
2012 Rap1gap2 limits neurite outgrowth and branching in Neuro-2a cells and counteracts Rap1-induced augmentation of neurite outgrowth. In mouse olfactory sensory neurons (OSNs), Rap1gap2 overexpression stunts axon outgrowth, while knockdown of Rap1gap2 significantly increases axon length, establishing a role for Rap1gap2 in controlling Rap1-dependent axon growth dynamics during early postnatal development. Overexpression and siRNA knockdown in Neuro-2a cells and in vivo OSN model, neurite length measurement, in vitro axon outgrowth assay Molecular and cellular neurosciences Medium 22732430
2015 Slp2-a (synaptotagmin-like protein 2-a) interacts with RAP1GAP2 via its C2B domain and regulates renal epithelial cell size; this interaction is distinct from Rab27 binding. Loss of Slp2-a leads to excess ezrin activation, indicating RAP1GAP2 participates in a Slp2-a-dependent pathway controlling cell size. Co-IP, siRNA knockdown in MDCK II cells, cell size measurement, pharmacological inhibition Biochemical and biophysical research communications Low 25817786

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Competing endogenous RNA expression profiling in pre-eclampsia identifies hsa_circ_0036877 as a potential novel blood biomarker for early pre-eclampsia. Clinical epigenetics 84 29643944
2005 Rap1GAP2 is a new GTPase-activating protein of Rap1 expressed in human platelets. Blood 79 15632203
2014 Genome-wide interaction studies reveal sex-specific asthma risk alleles. Human molecular genetics 60 24824216
2007 Cyclic nucleotide-dependent protein kinases inhibit binding of 14-3-3 to the GTPase-activating protein Rap1GAP2 in platelets. The Journal of biological chemistry 40 18039662
2009 Synaptotagmin-like protein 1 interacts with the GTPase-activating protein Rap1GAP2 and regulates dense granule secretion in platelets. Blood 32 19528539
2020 Identification of Circular RNA-MicroRNA-Messenger RNA Regulatory Network in Atrial Fibrillation by Integrated Analysis. BioMed research international 23 33062700
2011 Hostility in adolescents and adults: a genome-wide association study of the Young Finns. Translational psychiatry 21 22832427
2006 Differential G-alpha interaction capacities of the GoLoco motifs in Rap GTPase activating proteins. Cellular signalling 20 16949794
2022 Sex-dimorphic gene effects on survival outcomes in people with coronary artery disease. American heart journal plus : cardiology research and practice 11 35959094
2020 Methylome-wide association study of central adiposity implicates genes involved in immune and endocrine systems. Epigenomics 11 32901515
2013 Modelling cellular signal communication mediated by phosphorylation dependent interaction with 14-3-3 proteins. FEBS letters 5 24269229
2012 Rap1gap2 regulates axon outgrowth in olfactory sensory neurons. Molecular and cellular neurosciences 3 22732430
2015 Slp2-a inactivates ezrin by recruiting protein phosphatase 1 to the plasma membrane. Biochemical and biophysical research communications 2 25817786