Affinage

PRELID1

PRELI domain-containing protein 1, mitochondrial · UniProt Q9Y255

Length
219 aa
Mass
25.2 kDa
Annotated
2026-06-10
14 papers in source corpus 11 papers cited in narrative 11 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PRELID1 (PRELI) is a mitochondrial intermembrane-space lipid transfer protein that controls cardiolipin homeostasis and thereby sets the threshold for mitochondrial apoptosis (PMID:23931759). It forms a complex with TRIAP1 that extracts phosphatidic acid and transfers it across the IMS to the inner membrane for cardiolipin synthesis; loss of PRELID1 impairs cardiolipin accumulation, facilitates cytochrome c release, and sensitizes cells to apoptosis, with survival rescued by exogenous phosphatidylglycerol (PMID:23931759). PRELID1 is targeted to mitochondria by an N-terminal mitochondrial targeting signal (PMID:14640972). Work on the yeast ortholog Ups1 established the conserved logic of this pathway: Ups1 is an intrinsically unstable IMS protein whose stability and import are protected by binding the twin Cx9C protein Mdm35 (TRIAP1 in mammals), with turnover executed by the proteases Atp23 and Yme1 (PMID:20657548), and its phosphatidic-acid extraction is rate-limited by donor-membrane events, favored at positively curved membrane domains and tuned by pH and lipid composition [PMID:bio_10.1101_2025.04.03.647039]. Consistent with its role in cardiolipin-driven death, PRELID1 acts downstream of BLTP1-mediated phospholipid efflux: depleting PRELID1 blocks the pathological cardiolipin accumulation and apoptosis caused by BLTP1 loss [PMID:bio_10.1101_2025.09.30.679455]. Beyond cardiolipin transfer, PRELID1 associates with the dynamin-like GTPase OPA1 and supports mitochondrial morphology, membrane potential, and respiratory chain function in a manner requiring its LEA motif (PMID:21364629), and it modulates mitochondrial ROS and apoptotic/senescence responses across cell types (PMID:18945965, PMID:26275693).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2004 Medium

    Establishing where PRELI acts was the first step; demonstrating mitochondrial residence framed all subsequent mechanistic work.

    Evidence GFP-fusion live imaging and subcellular fractionation identifying an N-terminal mitochondrial targeting signal

    PMID:14640972

    Open questions at the time
    • Did not resolve sub-mitochondrial localization (IMS vs matrix)
    • No functional role assigned
  2. 2010 High

    Yeast genetics resolved how the unstable PRELI/Ups1 protein is stabilized and degraded, defining the chaperone-protease control of cardiolipin regulation.

    Evidence Yeast genetic epistasis, reciprocal Ups1/Mdm35 co-IP, and protease mutant (Δyme1, Δatp23) turnover analysis

    PMID:20657548

    Open questions at the time
    • Did not directly demonstrate lipid transfer biochemistry
    • Mammalian protease equivalents not tested here
  3. 2010 Medium

    A parallel line tied PRELI to OPA1 and bioenergetics, linking it to mitochondrial morphology and respiratory function beyond a purely structural role.

    Evidence PRELI–OPA1 co-IP, dominant-negative LEA(-) mutant, siRNA knockdown with ΔΨm/O2/ROS/complex readouts, and mouse embryo lethality

    PMID:21364629

    Open questions at the time
    • OPA1 interaction not validated structurally or by reconstitution
    • Dominant-negative approach carries interpretive caveats
  4. 2013 High

    The central mechanism was defined: PRELI/TRIAP1 directly transfers phosphatidic acid for cardiolipin synthesis, mechanistically coupling lipid handling to apoptosis sensitivity.

    Evidence TRIAP1/PRELI co-IP, in vitro lipid transfer assay, siRNA loss-of-function with CL/cytochrome c/apoptosis measurement, and phosphatidylglycerol rescue

    PMID:23931759

    Open questions at the time
    • Structural basis of PA binding not resolved
    • Regulation of transfer in cells not defined
  5. 2017 Low

    Post-transcriptional control was identified, showing alternative polyadenylation raises PRELID1 levels and links it to cell-type-specific ROS regulation.

    Evidence PAS-seq in breast tumor specimens with PRELID1 modulation and mitochondrial ROS measurement

    PMID:28912168

    Open questions at the time
    • Molecular mechanism of ROS regulation not defined beyond inference to the PA/CL pathway
    • Single-lab correlative tumor data
  6. 2025 Medium

    Genetic epistasis placed PRELID1 in a defined lipid-flux circuit, showing it is required downstream of BLTP1 for pathological cardiolipin accumulation and apoptosis.

    Evidence Double depletion of BLTP1 and PRELID1 with PA/PG/CL, apoptosis, and ROS measurement (preprint)

    PMID:bio_10.1101_2025.09.30.679455

    Open questions at the time
    • Preprint, not peer-reviewed
    • Direct physical relationship between BLTP1 and PRELID1 not established
  7. 2025 Medium

    Biophysical reconstitution refined the transfer mechanism, showing donor-membrane curvature is the rate-limiting determinant of PA extraction.

    Evidence In vitro lipid transfer with curvature-defined membranes, biophysical binding, and MD modeling (preprint)

    PMID:bio_10.1101_2025.04.03.647039

    Open questions at the time
    • Preprint, not peer-reviewed
    • Performed on yeast Ups1; mammalian PRELID1 curvature preference not confirmed

Open questions

Synthesis pass · forward-looking unresolved questions
  • How PRELID1's lipid transfer activity, OPA1 association, and ROS/apoptosis outputs are integrated and regulated in mammalian cells remains unresolved.
  • No structural model of mammalian PRELID1/TRIAP1 bound to PA
  • Mechanism connecting cardiolipin transfer to OPA1-dependent morphology unclear
  • In vivo physiological role beyond embryonic lethality uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008289 lipid binding 2 GO:0140104 molecular carrier activity 1
Localization
GO:0005739 mitochondrion 3
Pathway
R-HSA-1430728 Metabolism 1 R-HSA-5357801 Programmed Cell Death 1
Partners
Complex memberships
PRELID1–TRIAP1 (Ups1–Mdm35) lipid transfer complex

Evidence

Reading pass · 11 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 PRELID1 (PRELI) forms a complex with TRIAP1 in the mitochondrial intermembrane space (IMS) that transfers phosphatidic acid (PA) to the inner membrane for cardiolipin (CL) synthesis. Loss of PRELI impairs CL accumulation, facilitates cytochrome c release, and renders cells vulnerable to apoptosis; survival is rescued by exogenous phosphatidylglycerol. Co-immunoprecipitation of TRIAP1/PRELI complex; in vitro lipid transfer assay; loss-of-function (siRNA knockdown) with measurement of CL levels, cytochrome c release, and apoptosis; rescue by exogenous phosphatidylglycerol Cell metabolism High 23931759
2010 The yeast ortholog Ups1 (PRELID1 homologue) is an intrinsically unstable IMS protein that regulates cardiolipin accumulation. Its stability and import are protected by binding to Mdm35 (a twin Cx9C protein), and its turnover is mediated by the metallopeptidase Atp23 and the i-AAA protease Yme1. Yeast genetic interaction and epistasis; co-immunoprecipitation of Ups1/Mdm35 complex; protease mutant analysis (Δyme1, Δatp23) measuring protein turnover by pulse-chase/steady-state levels The EMBO journal High 20657548
2010 PRELI associates with the dynamin-like GTPase OPA1 and contributes to maintenance of mitochondrial morphology, mitochondrial membrane potential (ΔΨm), and respiratory chain function (complex I/NADH dehydrogenase and ATP synthase expression, oxygen consumption, ROS reduction). The LEA motif is required for these functions; dominant-negative PRELI/LEA(-) or PRELI knockdown renders cells vulnerable to apoptosis. Co-immunoprecipitation (PRELI–OPA1); dominant-negative overexpression of PRELI/LEA(-) mutant; siRNA knockdown; measurement of ΔΨm, oxygen consumption, ROS, complex I/ATP synthase expression; in vivo mouse embryo lethality with dominant-negative construct Cell death & disease Medium 21364629
2008 PRELI induces oxidative stress and a mitochondrial apoptosis pathway in human primary T helper cells, inhibits Th2-cell development, and down-regulates STAT6; the STAT6 down-regulation involves calpain, an oxidative stress-induced cysteine protease. PRELI overexpression in primary human Th cells; measurement of apoptosis markers, ROS, STAT6 protein levels; calpain inhibitor experiments linking oxidative stress to STAT6 degradation Blood Medium 18945965
2004 PRELI is localized to mitochondria via an N-terminal mitochondrial targeting signal, as demonstrated by GFP-fusion protein imaging and subcellular fractionation. GFP-fusion protein live imaging; subcellular fractionation; bioinformatic identification of mitochondrial targeting signal The Biochemical journal Medium 14640972
2005 Drosophila Preli-like (Prel) protein, a member of the PRELI/MSF1 family, localizes to mitochondria, indicating the PRELI/MSF1 domain function is mitochondria-specific. Subcellular localization of GFP-tagged Prel in Drosophila cells Development genes and evolution Low 15700158
2009 Drosophila Preli-like (Prel) loss-of-function in neurons decreases cellular ATP levels, causes mitochondrial fragmentation and sparse distribution in dendrites/axons, and leads to simplified/retracted dendritic arbors. Overexpression of Drob-1 (Bax-like) phenocopies this, while expression of Drob-1 antagonist Buffy in prel mutants restores dendritic morphology, placing Prel upstream of Bcl-2 family regulation of mitochondrial activity. Genetic loss-of-function (prel mutant Drosophila); ATP measurement; mitochondrial morphology imaging; genetic epistasis with Drob-1 and Buffy; measurement of respiratory chain complex IV activity Development (Cambridge, England) Medium 19855018
2017 An alternative polyadenylation (APA) event in PRELID1 mRNA enhances its steady-state level and translational efficiency; PRELID1 regulates mitochondrial reactive oxygen species (ROS) production in a cell-type-specific manner. PAS-seq (polyadenylation site sequencing) in primary breast tumor specimens; PRELID1 modulation (knockdown/overexpression) with measurement of mitochondrial ROS Molecular cancer research : MCR Low 28912168
2015 PRELID1 knockdown in HepG2 cells under oxidative stress leads to up-regulation of caspase-3 and down-regulation of SOD-1, increased mitochondrial apoptosis, and enhanced cellular senescence, demonstrating PRELID1 suppresses apoptosis and senescence in hepatocellular carcinoma cells. siRNA knockdown of PRELID1 in HepG2 cells; RT-PCR for caspase-3 and SOD-1; fluorescence-based mitochondrial apoptosis assay; senescence assay Annals of clinical and laboratory science Low 26275693
2025 PRELID1 (the mammalian Ups1 ortholog) is required for pathological accumulation of cardiolipin within mitochondria when the phospholipid efflux transporter BLTP1 is absent; depleting PRELID1 prevents apoptosis caused by BLTP1 deficiency, genetically placing PRELID1 downstream of BLTP1-mediated lipid efflux and upstream of CL-driven apoptosis. Genetic epistasis (double depletion of BLTP1 and PRELID1); measurement of PA, PG, and CL levels; apoptosis assays; ROS measurement bioRxivpreprint Medium bio_10.1101_2025.09.30.679455
2025 Ups1 (yeast PRELID1 ortholog) preferentially binds positively curved membrane regions for phosphatidic acid extraction; PA extraction is energetically favored at high-positive-curvature domains; events at the donor membrane are rate-limiting for the lipid transfer cycle; membrane binding is modulated by pH, lipid composition, and membrane morphology. In vitro lipid transfer assays with membranes of defined curvature; biophysical binding measurements; computational/MD modeling bioRxivpreprint Medium bio_10.1101_2025.04.03.647039

Source papers

Stage 0 corpus · 14 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 TRIAP1/PRELI complexes prevent apoptosis by mediating intramitochondrial transport of phosphatidic acid. Cell metabolism 167 23931759
2010 Regulation of mitochondrial phospholipids by Ups1/PRELI-like proteins depends on proteolysis and Mdm35. The EMBO journal 143 20657548
2005 A novel family of mitochondrial proteins is represented by the Drosophila genes slmo, preli-like and real-time. Development genes and evolution 33 15700158
2009 Mitochondrial protein Preli-like is required for development of dendritic arbors and prevents their regression in the Drosophila sensory nervous system. Development (Cambridge, England) 26 19855018
2008 PRELI is a mitochondrial regulator of human primary T-helper cell apoptosis, STAT6, and Th2-cell differentiation. Blood 25 18945965
2004 PRELI (protein of relevant evolutionary and lymphoid interest) is located within an evolutionarily conserved gene cluster on chromosome 5q34-q35 and encodes a novel mitochondrial protein. The Biochemical journal 24 14640972
2000 PRELI, the human homologue of the avian px19, is expressed by germinal center B lymphocytes. International immunology 24 10784606
2017 Alternative Polyadenylation of PRELID1 Regulates Mitochondrial ROS Signaling and Cancer Outcomes. Molecular cancer research : MCR 22 28912168
2010 Vital function of PRELI and essential requirement of its LEA motif. Cell death & disease 19 21364629
2015 Effects of PRELI in Oxidative-Stressed HepG2 Cells. Annals of clinical and laboratory science 8 26275693
2009 Conserved expression of the PRELI domain containing 2 gene (Prelid2) during mid-later-gestation mouse embryogenesis. Journal of molecular histology 7 19847657
2024 MicroRNA Profiling of PRELI-Modulated Exosomes and Effects on Hepatic Cancer Stem Cells. International journal of molecular sciences 1 39769068
2012 Spare PRELI gene loci: failsafe chromosome insurance? PloS one 1 22666421
2026 PRELID1 and VDAC3 Coordinate a Senescence-Like State in Germinal Center B Cells to Promote IL-7-Driven Antitumor Immunity in Colorectal Cancer. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 0 41706757

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