| 1992 |
PRDI-BF1 (PRDM1) requires only its first two C2H2 zinc fingers (ZF1 and ZF2) together for sequence-specific binding to the PRDI element of the beta-interferon gene promoter; ZF1 or ZF2 alone, ZF2–5, or ZF1+2 in reverse order are insufficient. |
Zinc finger domain-swap mutagenesis into a heterologous zinc finger protein, DNA-binding assay |
Molecular and cellular biology |
High |
1569931
|
| 1999 |
PRDI-BF1/Blimp-1 represses transcription through an active mechanism by recruiting Groucho-family corepressors (hGrg, TLE1, TLE2) via a defined minimal repression domain; dominant-negative Groucho fragments relieve IFN-beta repression, placing Groucho complexes as essential effectors of PRDI-BF1-mediated silencing. |
Gal4-fusion repression assays, GST pulldown/protein interaction mapping, dominant-negative overexpression, IFN-beta promoter activity assays |
Genes & development |
High |
9887105
|
| 2000 |
Blimp-1 represses c-myc transcription by recruiting histone deacetylase (HDAC) to the c-myc promoter; two independent HDAC-associating regions exist in Blimp-1, the HDAC inhibitor TSA blocks Blimp-1-dependent repression, and Blimp-1 expression causes H3 deacetylation at the c-myc Blimp-1 binding site in a site-dependent manner. |
Gal4-fusion cotransfection repression assays, co-immunoprecipitation of HDAC with Blimp-1 from nuclear extracts, TSA inhibitor treatment, chromatin immunoprecipitation (ChIP) |
Molecular and cellular biology |
High |
10713181
|
| 2004 |
PRDI-BF1 (human PRDM1) assembles silent chromatin over the IFN-beta promoter by recruiting the histone H3 lysine methyltransferase G9a; G9a is only recruited when in complex with PRDI-BF1, and G9a catalytic activity is required for H3 methylation accumulation and PRDI-BF1-mediated transcriptional silencing in vivo. |
Co-immunoprecipitation, chromatin immunoprecipitation (ChIP), G9a catalytic-mutant functional assays in U2OS cells |
Nature immunology |
High |
14985713
|
| 2006 |
Blimp-1 is required for T cell homeostasis and self-tolerance; mice reconstituted with fetal liver cells expressing a DNA-binding domain-deleted Blimp-1 develop lethal multiorgan inflammatory disease due to accumulation of effector and memory T cells, demonstrating that the DNA-binding activity of Blimp-1 is essential for its function in T cells. |
Conditional loss-of-function mouse model (DNA-binding domain deletion), fetal liver reconstitution, immunophenotyping |
Nature immunology |
High |
16565720
|
| 2006 |
Blimp-1 is required for T cell homeostasis; Blimp-1-deficient mice show increased peripheral effector T cells, severe colitis, and Blimp-1-deficient CD4+ T cells overproduce IL-2 and IFN-γ but produce less IL-10 after TCR stimulation, establishing Blimp-1 as a repressor of T cell activation and cytokine production. |
Conditional Blimp-1 knockout mice, T cell transfer colitis model, intracellular cytokine assay, proliferation assay |
Nature immunology |
High |
16565721
|
| 2006 |
Blimp-1 is required for immunoglobulin secretion by B-1 cells; B-1 cells lacking Blimp-1 fail to repress Pax5 mRNA, fail to induce XBP-1, and cannot secrete normal levels of IgM, demonstrating that B-1 and B-2 cells share a common Blimp-1-dependent pathway for Ig secretion. |
B-cell-lineage-specific Blimp-1 knockout mice, RT-PCR for Pax5/XBP-1, ELISA for IgM secretion, influenza infection model |
The Journal of experimental medicine |
High |
16954370
|
| 2007 |
BLIMP1 represses p53 transcription by binding directly to the p53 promoter, forming an autoregulatory feedback loop: p53 positively regulates BLIMP1, and BLIMP1 in turn represses p53 transcription; BLIMP1 knockdown raises p53 mRNA and protein, induces p53-target genes, and causes apoptosis that is rescued by p53 depletion. |
siRNA knockdown, promoter-binding ChIP, p53-null cell rescue experiments, RT-PCR, western blot |
Proceedings of the National Academy of Sciences of the United States of America |
High |
17264218
|
| 2007 |
BLIMP1 (Blimp-1) negatively regulates IL-2 production in activated T cells via a cytokine-dependent feedback loop: IL-2 induces Blimp-1 expression, and ectopic Blimp-1 in turn represses IL-2 production while promoting granzyme B and CD25 expression. |
Microarray analysis, ectopic overexpression of Blimp-1, intracellular cytokine assay in CD4+ and CD8+ T cells |
Journal of immunology |
Medium |
17182561
|
| 2007 |
Human BSAP (PAX5) binds to the PRDM1 promoter and represses BLIMP1 expression, revealing an autoregulatory negative-feedback loop in which BLIMP1 represses PAX5 and PAX5 represses BLIMP1. |
EMSA (electrophoretic mobility shift assay), ChIP confirming in vivo PAX5 binding to PRDM1 promoter, ectopic BSAP expression with promoter mutant analysis |
Blood |
High |
17682124
|
| 2009 |
Bcl6 and Blimp-1 act as reciprocal antagonistic regulators of T follicular helper (TFH) cell differentiation: Bcl6 expression in CD4+ T cells is necessary and sufficient for TFH differentiation in vivo, whereas Blimp-1 inhibits TFH differentiation and thereby prevents B cell germinal center and antibody responses. |
Conditional knockout mice (Bcl6 and Blimp-1), in vivo immunization models, flow cytometry, adoptive transfer |
Science |
High |
19608860
|
| 2009 |
Blimp-1/PRDM1 mediates transcriptional suppression of the NLR gene NLRP12 in myeloid cells; Blimp-1 binds the NLRP12 promoter in a TLR-inducible manner, reduces NLRP12 promoter activity and histone 3 acetylation, and physiological evidence from Blimp-1-deficient murine myeloid cells confirms this regulation. |
ChIP, promoter activity assays, TLR stimulation, Blimp-1-knockout myeloid cell analysis |
Journal of immunology |
High |
19234190
|
| 2009 |
The mouse Prdm1 gene has three alternative promoter regions, and NF-κB binding sites in the previously described first exon are required for Prdm1 induction by LPS; deletion of exon 1 abolishes lipopolysaccharide-induced Prdm1 expression in B cells and blocks antibody-secreting cell formation. |
Targeted deletion mouse models of individual Prdm1 promoter/exon regions, LPS stimulation of B cells, ELISA for antibody secretion |
Molecular and cellular biology |
High |
19737919
|
| 2010 |
PRDM1/Blimp-1 directly binds conserved regulatory regions of IFNG and TNF loci in NK cells, coordinately repressing IFN-γ, TNF-α, and TNF-β production; PRDM1 ablation enhances cytokine production without affecting cytotoxicity, and overexpression blocks cytokine production. |
ChIP confirming direct PRDM1 binding at IFNG and TNF loci, shRNA knockdown, overexpression, intracellular cytokine assay in human NK cells |
Journal of immunology |
High |
20944005
|
| 2010 |
Blimp1 (Prdm1) conditional deletion in the mouse retina causes Otx2+ photoreceptor precursors to ectopically express bipolar cell markers (Chx10/Vsx2 and Vsx1) and adopt bipolar instead of photoreceptor fate, demonstrating that Blimp1 stabilizes immature photoreceptors by preventing bipolar cell induction. |
Conditional knockout mouse (retina-specific Prdm1 deletion), developmental immunostaining, fate marker analysis |
Development |
High |
20110327
|
| 2010 |
BLIMP1 DNA-binding is methylation-sensitive; multiple binding motif variants are required to capture full BLIMP1 occupancy in vivo, and BLIMP1 occupancy at promoters with overlapping BLIMP1/IRF motifs constitutes a dynamic target set preferentially activated by BLIMP1 knockdown, confirming competitive antagonism between BLIMP1 and IRFs. |
ChIP-seq (genome-wide BLIMP1 occupancy mapping), motif discovery, CpG methylation analysis, BLIMP1 knockdown with transcriptome analysis |
Nucleic acids research |
High |
20421211
|
| 2010 |
Prdm1 reconstitution in PRDM1-null NK cell lines leads to G2/M cell cycle arrest and increased apoptosis, and MYC and 4-1BBL are identified as direct targets of PRDM1 in NK cells, supporting its tumor suppressor function in NK cell malignancies. |
Retroviral reconstitution of PRDM1 in NK cell lines, cell cycle analysis, apoptosis assays, target gene identification |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
22143801
|
| 2012 |
Blimp1/Prdm1 in trophoblast cells is required for terminal differentiation of invasive spiral artery-associated trophoblast giant cells (SpA-TGCs) and expansion of the spongiotrophoblast layer; lineage tracing with a Prdm1.Cre-LacZ allele demonstrates that Blimp1+ diploid progenitors give rise to SpA-TGCs, canal TGCs, and glycogen trophoblasts. |
Conditional trophoblast-specific Prdm1 knockout, Prdm1.Cre-LacZ lineage tracing, developmental histology |
Genes & development |
High |
22987638
|
| 2013 |
Blimp1-deficient dendritic cells (DCs) exhibit elevated MHC II expression and enhanced proinflammatory cytokine secretion; BLIMP1 regulates this phenotype indirectly through the microRNA let-7c, which is upregulated when Blimp1 is absent; let-7c in turn inhibits SOCS1 expression, amplifying pro-inflammatory signaling. |
DC-specific Blimp1 knockout mouse, miRNA expression profiling, let-7c overexpression and inhibition, flow cytometry, cytokine ELISA |
The Journal of clinical investigation |
High |
23298838
|
| 2014 |
In C. elegans, BLMP-1 (Blimp-1 ortholog) prevents precocious dorsalward turning of distal tip cells by inhibiting unc-5 transcription; correct timing of BLMP-1 downregulation is controlled by DAF-12 (steroid hormone receptor) and LIN-29 (transcription factor) repressing blmp-1 transcription, and DRE-1/FBXO11 (SCF ubiquitin ligase F-box protein) binding to BLMP-1 and promoting its degradation. Human FBXO11 also binds PRDI-BF1 in human cell cultures. |
C. elegans genetics (constitutive expression, morpholino knockdown, double mutants), co-immunoprecipitation of DRE-1/FBXO11 with BLMP-1/PRDI-BF1 in human cells |
PLoS genetics |
Medium |
24968003
|
| 2015 |
Blimp-1 binds an IFN-stimulated response element within the HIV-1 provirus in CD4+ memory T cells, repressing both basal and Tat-mediated HIV-1 transcription; Blimp-1 reduction in primary CD4+ memory T cells increases RNA polymerase II processivity, histone acetylation, and HIV-1 transcription. |
ChIP demonstrating Blimp-1 occupancy at HIV-1 ISRE, siRNA knockdown in primary T cells, RNA pol II ChIP, histone acetylation ChIP |
Journal of immunology |
High |
25710909
|
| 2015 |
VEGF/VEGFR2 signaling through Erk1/2 and Stat3 upregulates PRD1-BF1/Blimp1 in tumor vascular endothelial cells; nuclear Blimp1 then directly represses genes involved in type I interferon-mediated antiviral signaling, sensitizing tumor vasculature to oncolytic vaccinia virus infection. |
Signaling pathway inhibitors (Erk1/2, Stat3), immunofluorescence of nuclear Blimp1 localization, in vivo VEGF signaling suppression with functional antiviral gene expression readout |
Cancer cell |
Medium |
26212250
|
| 2015 |
Blimp1/Prdm1 in the neonatal intestinal epithelium directly binds and represses promoters of MHC class I pathway components (including ERAP1, TAPASIN, LMP7, MECL1), as revealed by genome-wide ChIP-seq; Blimp1 functions in opposition to the transcriptional activator Irf1 at these loci to prevent premature MHC class I expression and maintain neonatal intestinal tolerance. |
ChIP-seq (eGFP-Blimp1 knock-in), comparison with Irf1 ChIP-seq, genetic knockout analysis of neonatal intestinal gene expression |
PLoS genetics |
High |
26158850
|
| 2016 |
Bach2, a transcription factor that represses Blimp-1 expression in B cells, associates in a complex with HDAC3, NCoR1, NCoR2, Tbl1x, and Rif1 at the Prdm1 locus; HDAC3 and Rif1 bind the Prdm1 intron 5 MARE region, and knockdown of HDAC3 or NCoR1 increases Prdm1 mRNA in B cells. |
Co-immunoprecipitation/mass spectrometry of Bach2 complex, ChIP of HDAC3 and Rif1 at Prdm1 locus, RNAi knockdown of HDAC3/NCoR1, histone acetylation/methylation analysis by ChIP |
The Journal of biological chemistry |
High |
26786103
|
| 2017 |
PRDM1 is required for response to bortezomib in mantle cell lymphoma; bortezomib rapidly induces PRDM1 transcription, and PRDM1 knockdown blocks NOXA activation and apoptosis; PRDM1 directly represses MKI67 and PCNA via specific binding sites in their promoters as shown by ChIP and promoter mutation analysis. |
siRNA knockdown, ectopic PRDM1 overexpression, ChIP, promoter deletion/mutation reporter assays, apoptosis assays |
Molecular cancer research |
High |
20530581
|
| 2017 |
BLIMP1 drives PDAC metastasis as a transcriptional regulator; hypoxia induces BLIMP1, which regulates a subset of hypoxia-associated gene expression programs, and BLIMP1 expression marks a highly metastatic cancer cell subpopulation with stem cell character. |
Genetically engineered mouse model of PDAC, global gene expression profiling, BLIMP1 gain/loss-of-function in cancer cells, hypoxia treatment |
Cancer discovery |
Medium |
28790031
|
| 2018 |
PAX5 (BSAP) and OCT4 switch binding partners during germ cell specification: in pluripotent cells OCT4 partners with SOX2, whereas in hPGC development OCT4 partners with PAX5 and PRDM1; epistasis analysis places PAX5 upstream of OCT4 and PRDM1, forming a core PAX5-OCT4-PRDM1 transcriptional network that activates germline and represses somatic programs. |
OCT4 ChIP-seq in hPGCs vs. hESCs, gain/loss-of-function (CRISPR KO, overexpression) of PAX5, epistasis analysis, engraftment assay |
Nature cell biology |
High |
29713018
|
| 2018 |
PRDM1β (an isoform of PRDM1) is a p53-response gene; both α and β isoforms of PRDM1 repress MYC-response genes and stem cell-related genes; forced PRDM1 expression in human colon cancer organoids prevents their formation and growth. |
PRDM1 knockout and overexpression in RKO cells and human colon organoids, RNA-seq (transcript landscape), organoid growth assays |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
29760071
|
| 2018 |
Blimp-1 initiates granzyme B expression in murine effector CD8 T cells and tissue-resident memory T cells (Trm) during the effector stage; Blimp-1 protein is only transiently expressed during effector stage while Hobit protein is stably maintained during quiescence and specifically maintains granzyme B in Trm during the memory phase. |
Murine Blimp-1 conditional KO, protein/mRNA expression time-course analysis, granzyme B immunostaining in effector and memory T cell subsets |
European journal of immunology |
Medium |
30051906
|
| 2019 |
Blimp-1 prevents demethylation-driven loss of Foxp3 expression in CNS Treg cells during EAE by negatively regulating IL-6/STAT3-dependent Dnmt3a expression and function, thereby restraining methylation of Treg-specific CNS2 in the Foxp3 locus; Blimp1 ablation in Tregs leads to heavy CNS2 methylation, loss of Foxp3, and severe autoimmune disease. |
Treg-specific Blimp1 conditional KO, bisulfite sequencing of Foxp3 CNS2, DNMT3a ChIP, EAE model |
Cell reports |
High |
30759395
|
| 2019 |
Blimp-1 directly activates the Il10 gene in both effector and regulatory T cells, with Treg-intrinsic Blimp-1 being essential for IL-10 expression and full effector Treg functionality but dispensable for preventing spontaneous intestinal inflammation. |
Foxp3-Cre Blimp-1 conditional KO mice, cytokine ELISA, intracellular cytokine staining, colitis scoring |
Scientific reports |
Medium |
28935958
|
| 2019 |
Blimp1 directly activates the expression of neural, neural crest, and sensory progenitor specifier genes in chick epiblast by binding to their promoter regions and recruiting the histone demethylase Kdm4a to remove repressive histone marks; once neural lineage determinants are expressed, they in turn repress PRDM1. |
ChIP demonstrating PRDM1 binding at target promoters, Kdm4a co-recruitment assay, gain- and loss-of-function in chick embryo, repressive histone mark analysis |
Development |
High |
31806661
|
| 2019 |
During acute LCMV infection, Blimp-1 recruits LSD1 to the Pdcd1 (PD-1) gene locus, downregulates PD-1 expression by facilitating removal of activating histone marks, and is required for remethylation of the Pdcd1 locus; in chronic infection this Blimp-1/LSD1 axis is not operative. |
LSD1-deficient CD8 T cells, ChIP of Blimp-1 and LSD1 at Pdcd1 locus, DNA methylation analysis, LCMV acute vs. chronic infection models, murine melanoma model |
Journal of immunology |
High |
31811020
|
| 2020 |
Treg-specific loss of Blimp-1 reduces ST2+KLRG1+ IL-10-secreting Tregs in white adipose tissue, protecting mice from glucose intolerance, insulin resistance, and diet-induced obesity through increased white adipose tissue browning, establishing a Blimp-1-regulated IL-10 Treg axis in metabolic homeostasis. |
Treg-specific Blimp-1 knockout mice on high-fat diet, metabolic phenotyping, flow cytometry, WAT beiging assessment |
JCI insight |
Medium |
33351782
|
| 2020 |
Blimp-1 promotes Th2 cell development in the lung through repression of Bcl6, leading to increased GATA3 expression; this pathway requires IL-10/STAT3-dependent induction of Blimp-1 and is specific to inhaled allergens but dispensable for TFH function. |
T cell-specific Blimp-1 conditional KO, house dust mite/OVA allergen models, intracellular GATA3/Bcl6 staining, IL-10 neutralization/STAT3 inhibition |
The Journal of experimental medicine |
Medium |
32399548
|
| 2022 |
PRDM1 CRISPR/Cas9 knockout in CAR-T cells promotes an early memory phenotype and polyfunctional cytokine secretion by increasing chromatin accessibility at memory-associated gene loci; PRDM1-ablated T cells show enhanced persistence and improved antitumor efficacy in multiple tumor models. |
CRISPR/Cas9 knockout of PRDM1 in CAR-T cells, ATAC-seq (chromatin accessibility), in vivo tumor models, cytokine profiling |
Blood |
High |
34861037
|
| 2022 |
PRDM1 enhances USP22 transcription, which in turn deubiquitinates and stabilizes the transcription factor SPI1, which then activates PD-L1 transcription in hepatocellular carcinoma cells, thereby dampening anti-tumor CD8+ T cell immunity; this PRDM1-USP22-SPI1-PD-L1 axis represents a transcriptional activation (not repression) function for PRDM1. |
PRDM1 overexpression/knockdown in HCC cells and mouse models, USP22 promoter reporter, SPI1 ubiquitination/deubiquitination assay, PD-L1 expression and CD8+ T cell co-culture assays |
Nature communications |
Medium |
36509766
|
| 2022 |
Dual CRISPR knockout of PRDM1 and NR4A3 in CAR-T cells skews phenotype from TIM-3+CD8+ toward TCF1+CD8+ and counters exhaustion of tumor-infiltrating CAR-T cells; PRDM1 deficiency alone activates a compensatory NFAT-driven NR4A3-upregulation exhaustion program, not achieved by either single KO. |
Single and dual CRISPR KO of PRDM1 and NR4A3 in CAR-T cells, scRNA-seq, in vivo solid tumor models |
Science translational medicine |
Medium |
36350986
|
| 2024 |
The relative balance between BLIMP1 and BACH2 progressively shifts in favor of BLIMP1 during primary B cell responses; this balance dictates memory B cell fate upon recall—higher BLIMP1:BACH2 favors plasma cell development and lower BLIMP1:BACH2 favors secondary germinal center formation; skewing this balance experimentally switches fate preferences; IRF4 epigenetically encodes stimulation history by opening PC-specific chromatin loci in a stimulation-strength-dependent manner. |
Single-cell epigenomics (scATAC-seq) and transcriptomics of antigen-responding B cells, genetic manipulation of BLIMP1/BACH2 balance in fate-predisposed MBC subsets, GC B cell lineage tracing, ChIP/ATAC at ISRE loci |
Nature immunology |
High |
38969872
|
| 2007 |
PRDM1/BLIMP-1 represses genes of the MHC class I antigen-processing and peptide-loading pathway (ERAP1, TAPASIN, MECL1, LMP7) by antagonizing IFN-γ-driven transcription at conserved IRF-element-containing promoters, resulting in failure to upregulate surface MHC class I in response to IFN-γ. |
Promoter reporter assays, PRDM1 expression in human cell lines, sea urchin prdm1 ortholog evolutionary comparison, surface MHC class I flow cytometry |
Journal of immunology |
Medium |
18025207
|
| 2006 |
BLIMP-1 is a downstream target of the unfolded protein response (UPR): BLIMP-1 mRNA is rapidly induced at the transcriptional level during UPR in human myeloid and B-cell lines in a PERK-dependent, new-protein-synthesis-independent, and NF-κB-dependent manner. |
UPR induction with chemical agents, transcriptional run-on/mRNA induction assays, PERK-pathway inhibition, NF-κB inhibition, conserved in murine B cells and macrophages |
European journal of immunology |
Medium |
16708403
|
| 2015 |
Blimp-1/PRDM1 directly binds and transcriptionally activates (rather than represses) the CS1/SLAMF7 gene promoter in NK and B cells, as demonstrated by EMSA and ChIP; mutation of the PRDM1 binding site at -750 to -746 reduces CS1 promoter activity, revealing a context-dependent trans-activating function for PRDM1. |
EMSA, ChIP, promoter deletion and mutation reporter assays in NK and B cell lines |
Immunobiology |
Medium |
26310579
|
| 2009 |
PRDM1/BLIMP-1 represses primary miR-21 transcription during IL-21-driven plasma cell differentiation, counteracting STAT3-mediated miR-21 induction; BLIMP-1 and STAT3 form an incoherent feed-forward loop downstream of IL-21 that coordinates microRNA with mRNA expression. |
Primary miR-21 transcription analysis, promoter binding assays, phospho-STAT3 ChIP, BLIMP-1 overexpression in B cell differentiation cultures |
Journal of immunology |
Medium |
22634616
|