Affinage

PPP2R5B

Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform · UniProt Q15173

Length
497 aa
Mass
57.4 kDa
Annotated
2026-04-28
11 papers in source corpus 7 papers cited in narrative 7 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PPP2R5B (B56β) is a regulatory B subunit of the protein phosphatase 2A (PP2A) holoenzyme that directs substrate specificity toward growth- and survival-related signaling pathways. It recruits PP2A to dephosphorylate and inactivate AKT, thereby suppressing insulin-stimulated glucose uptake in adipocytes, regulating metallothionein expression and cadmium sensitivity, and inhibiting dendritic branching via CALEB/NGC in neurons (PMID:27521959, PMID:26081707, PMID:18385213). B56β also selectively binds Pim-1 kinase, promoting its dephosphorylation, ubiquitination, and proteasomal degradation (PMID:17297438). De novo missense mutations clustering in the substrate-binding region of B56β cause a human overgrowth syndrome with macrocephaly and intellectual disability, consistent with impaired PP2A-mediated dephosphorylation of growth-regulatory substrates (PMID:25972378).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 1996 Medium

    Identification of PPP2R5B as a brain-enriched PP2A regulatory subunit mapped to chromosome 11q12 established the gene's identity and suggested tissue-specific functions.

    Evidence Northern blotting and FISH chromosomal mapping

    PMID:8812429

    Open questions at the time
    • No substrates or signaling pathways identified
    • No functional assay performed beyond expression profiling
  2. 2007 High

    Demonstrating that B56β selectively binds Pim-1 kinase and promotes its dephosphorylation-dependent ubiquitination and degradation revealed the first specific substrate of the B56β-PP2A holoenzyme and linked it to oncogenic kinase regulation.

    Evidence Reciprocal co-IP, shRNA knockdown with pulse-chase half-life and ubiquitination assays in cell lines

    PMID:17297438

    Open questions at the time
    • Specific phospho-site on Pim-1 targeted by B56β-PP2A not identified
    • In vivo relevance to tumorigenesis not tested
  3. 2008 High

    Discovery that B56β interacts with CALEB/NGC to recruit the full PP2A holoenzyme and suppress Akt phosphorylation in dendrites established a neuronal-specific substrate-targeting mechanism controlling dendritic branching.

    Evidence Yeast two-hybrid, affinity chromatography/mass spectrometry, co-IP, and functional overexpression in primary neurons

    PMID:18385213

    Open questions at the time
    • Direct dephosphorylation of AKT by CALEB/NGC-recruited PP2A not reconstituted in vitro
    • Whether this mechanism operates in vivo in brain development not demonstrated
  4. 2015 Medium

    Showing that B56β-PP2A dephosphorylates AKT to upregulate metallothionein expression and modulate cadmium cytotoxicity broadened the functional repertoire of B56β-directed AKT dephosphorylation to stress-response pathways.

    Evidence Retroviral overexpression and shRNA knockdown with pharmacological epistasis (wortmannin) in cell lines

    PMID:26081707

    Open questions at the time
    • Direct in vitro dephosphorylation of AKT by purified B56β-PP2A not reconstituted
    • Transcriptional mechanism linking AKT inactivation to MT gene induction not defined
  5. 2015 Medium

    Identification of de novo PPP2R5B mutations in patients with overgrowth, macrocephaly, and intellectual disability linked impaired PP2A substrate engagement to a human developmental disorder, connecting the AKT-regulatory function to growth control.

    Evidence Trio-based exome sequencing with mutation mapping onto PP2A holoenzyme crystal structure

    PMID:25972378

    Open questions at the time
    • Functional impact of mutations on phosphatase activity not biochemically validated
    • Specific substrates affected by disease mutations not determined experimentally
    • Animal model of disease mutations not generated
  6. 2016 Medium

    Demonstrating that B56β mediates AKT dephosphorylation in adipocytes under chronic hyperinsulinemia established a metabolic role for B56β-PP2A in insulin resistance.

    Evidence Overexpression and shRNA knockdown in adipocytes with glucose uptake assay, corroborated in high-fat diet mouse model

    PMID:27521959

    Open questions at the time
    • Direct reconstitution of AKT dephosphorylation by B56β-PP2A not performed
    • Adipocyte-specific knockout model not generated
  7. 2016 Medium

    Finding that B56β is specifically induced during erythroid differentiation and is required for hemin-induced erythroid maturation suggested a lineage-specific developmental function beyond AKT regulation.

    Evidence Expression analysis and siRNA knockdown in K562 cells treated with hemin

    PMID:27544028

    Open questions at the time
    • Downstream PP2A substrates mediating erythroid differentiation not identified
    • Not validated in primary erythroid progenitors or in vivo

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include the full substrate repertoire of B56β-PP2A, the biochemical mechanism by which disease-associated mutations impair phosphatase function, and whether B56β-PP2A plays non-redundant roles versus other B56 family members in vivo.
  • No crystal structure of disease-mutant B56β-PP2A holoenzyme available
  • No genome-wide substrate identification (e.g., phosphoproteomics after acute B56β depletion) performed
  • Genetic knockout or conditional deletion models in mammals not reported

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 4
Localization
GO:0005829 cytosol 2
Pathway
R-HSA-392499 Metabolism of proteins 1
Complex memberships
PP2A holoenzyme

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2007 PPP2R5B (B56β) directly interacts with Pim-1 kinase and negatively regulates Pim-1 protein levels by promoting its dephosphorylation, ubiquitination, and subsequent degradation. B56β-containing PP2A selectively binds Pim-1 (not other B56 isoforms), and shRNA knockdown of B56β increases Pim-1 half-life from 0.7 to 2.8 h and decreases Pim-1 ubiquitination. Co-immunoprecipitation, shRNA knockdown, pulse-chase protein half-life assay, ubiquitination assay, okadaic acid inhibition Oncogene High 17297438
2008 PPP2R5B (B56β) interacts with CALEB/NGC (a neural EGF-family protein) and recruits the full PP2A holoenzyme (structural and catalytic subunits) to this complex, thereby inhibiting CALEB/NGC-mediated dendritic branching by suppressing Akt phosphorylation in dendrites, without affecting Akt-independent spine formation. Yeast two-hybrid screen, affinity chromatography, mass spectrometry, Co-IP, immunocytochemistry, overexpression/functional assays in neurons FASEB Journal High 18385213
2015 De novo mutations in PPP2R5B cluster within a nine-amino-acid region of the B56β subunit and are predicted to affect substrate binding of the PP2A holoenzyme, leading to impaired dephosphorylation of substrates including AKT pathway components, resulting in human overgrowth with macrocephaly and intellectual disability. Trio-based exome sequencing, mutation mapping onto PP2A holoenzyme crystal structure, statistical analysis of de novo mutation burden Human Molecular Genetics Medium 25972378
2016 PPP2R5B (B56β) acts as the regulatory subunit of PP2A responsible for dephosphorylating and inactivating AKT in adipocytes; overexpression of PPP2R5B decreases AKT phosphorylation and glucose uptake, while knockdown increases AKT phosphorylation, contributing to chronic hyperinsulinemia-induced insulin resistance. Overexpression and shRNA knockdown in adipocytes, Western blot for p-AKT, glucose uptake assay, okadaic acid inhibition, high-fat diet mouse model Molecular and Cellular Endocrinology Medium 27521959
2016 B56β (PPP2R5B) is the specific B56 family member whose expression is induced during erythroid differentiation (by EPO in fetal liver cells and hemin in K562 cells), and knockdown of B56β attenuates hemin-induced erythroid differentiation. Expression analysis, siRNA knockdown, hemin-induced differentiation assay in K562 cells Biochemical and Biophysical Research Communications Medium 27544028
2015 PP2A complexes containing B56β dephosphorylate AKT directly, which in turn regulates metallothionein (MT) expression and cellular sensitivity to CdCl2-induced cytotoxicity; B56β knockdown increases p-AKT and decreases MT, while B56β overexpression decreases p-AKT and increases MT. Retroviral overexpression and shRNA knockdown, Western blot, MTT cytotoxicity assay, PI3K inhibitor (wortmannin) epistasis Zhonghua Yu Fang Yi Xue Za Zhi Medium 26081707
1996 PPP2R5B (B56β) encodes a regulatory subunit of PP2A that is most highly expressed in brain, and the gene maps to chromosome 11q12. Northern blotting, fluorescence in situ hybridization (FISH) Genomics Medium 8812429

Source papers

Stage 0 corpus · 11 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Mice lacking phosphatase PP2A subunit PR61/B'delta (Ppp2r5d) develop spatially restricted tauopathy by deregulation of CDK5 and GSK3beta. Proceedings of the National Academy of Sciences of the United States of America 103 21482799
2015 Mutations in the PP2A regulatory subunit B family genes PPP2R5B, PPP2R5C and PPP2R5D cause human overgrowth. Human molecular genetics 75 25972378
2007 Negative regulation of Pim-1 protein kinase levels by the B56beta subunit of PP2A. Oncogene 70 17297438
1996 Assignment of human protein phosphatase 2A regulatory subunit genes b56alpha, b56beta, b56gamma, b56delta, and b56epsilon (PPP2R5A-PPP2R5E), highly expressed in muscle and brain, to chromosome regions 1q41, 11q12, 3p21, 6p21.1, and 7p11.2 --> p12. Genomics 58 8812429
2004 Genomic organisation, chromosomal localisation tissue distribution and developmental regulation of the PR61/B' regulatory subunits of protein phosphatase 2A in mice. Journal of molecular biology 51 15095873
2016 PPP2R5B, a regulatory subunit of PP2A, contributes to adipocyte insulin resistance. Molecular and cellular endocrinology 19 27521959
2008 B56beta, a regulatory subunit of protein phosphatase 2A, interacts with CALEB/NGC and inhibits CALEB/NGC-mediated dendritic branching. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 12 18385213
2019 MiR-8-3p regulates hyperthermia-induced lactate secretion by targeting PPP2R5B in boar Sertoli cells. Molecular reproduction and development 10 31489750
2016 Protein phosphatase 2A regulatory subunit B56β modulates erythroid differentiation. Biochemical and biophysical research communications 9 27544028
2015 [The role of protein phosphatase 2A B56β holoenzyme in the regulation of heavy metal CdCl2 induced cytotoxicity]. Zhonghua yu fang yi xue za zhi [Chinese journal of preventive medicine] 1 26081707
1997 Mapping of the gene encoding the B56 beta subunit of protein phosphatase 2A (PPP2R5B) to a 0.5-Mb region of chromosome 11q13 and its exclusion as a candidate gene for multiple endocrine neoplasia type 1 (MEN1). Human genetics 1 9272177