| 2013 |
OTULIN (FAM105B) is a deubiquitinase with exquisite specificity for Met1-linked (linear) polyubiquitin chains. Crystal structures of the OTULIN catalytic domain in complex with diubiquitin revealed Met1-specific Ub-binding sites and a mechanism of substrate-assisted catalysis in which the proximal Ub activates the catalytic triad; mutation of Ub Glu16 reduces kcat 240-fold. OTULIN binds LUBAC and its overexpression prevents TNFα-induced NEMO association with ubiquitinated RIPK1. |
Crystal structure, in vitro DUB assay, active-site mutagenesis, Co-IP, overexpression/knockdown |
Cell |
High |
23746843
|
| 2013 |
OTULIN specifically disassembles Met1-linked polyubiquitin and restricts Met1-Ub accumulation after NOD2 stimulation. RIPK2 was identified as the predominant NOD2-regulated Met1-Ub substrate by affinity purification of Met1-Ub followed by quantitative proteomics. OTULIN-depleted cells spontaneously accumulate Met1-Ub on LUBAC components. |
siRNA knockdown, affinity purification of Met1-Ub + quantitative MS proteomics, overexpression |
Molecular cell |
High |
23806334
|
| 2014 |
OTULIN binds LUBAC via a conserved PUB-interacting motif (PIM) that interacts with the PUB domain of the LUBAC component HOIP. Crystal structures and NMR reveal the molecular basis for the high-affinity interaction. Phosphorylation of OTULIN at Tyr56 within the PIM prevents HOIP binding; unphosphorylated OTULIN is part of the endogenous LUBAC complex. OTULIN must be present on LUBAC to restrict Met1-polyUb signaling. |
Crystal structure, NMR, Co-IP, phosphomimetic mutagenesis, endogenous complex analysis |
Molecular cell |
High |
24726323
|
| 2014 |
The HOIP PUB domain binds the PIM of OTULIN (critical contact residue Tyr56) and also binds the chaperone VCP/p97. Phosphorylation of OTULIN Tyr56 negatively regulates HOIP binding. HOIP binding to OTULIN is required for recruitment of OTULIN to the TNF receptor complex and to counteract HOIP-dependent NF-κB pathway activation. |
Structural studies, phosphomimetic mutagenesis, Co-IP, reporter assay |
Molecular cell |
High |
24726327
|
| 2014 |
Both CYLD and OTULIN interact with LUBAC via the PUB domain of HOIP in unstimulated cells. CYLD and OTULIN synergistically suppress LUBAC-mediated linear polyubiquitination and NF-κB activation. The HOIP–OTULIN interaction is also involved in OTULIN suppression of canonical Wnt signaling activated by LUBAC. |
Co-IP, cell-free ubiquitination assay, HOIP-null cell complementation, reporter assay |
Genes to cells |
Medium |
24461064
|
| 2016 |
OTULIN is essential in vivo for preventing TNF-associated systemic inflammation. OTULIN deficiency in myeloid cells causes accumulation of M1-linked polyubiquitin and spontaneous NF-κB activation, while deficiency in B and T cells leads to LUBAC degradation and downregulation of M1-polyUb signaling. Anti-TNF treatment rescues mouse phenotypes, placing TNF downstream of OTULIN. |
Four independent mouse knockout models, anti-TNF rescue, cell-type-specific deletion, biochemical analysis of M1-Ub levels |
Cell |
High |
27523608
|
| 2018 |
OTULIN promotes LUBAC activity by preventing LUBAC auto-ubiquitination with linear polyubiquitin. Catalytically inactive OTULIN knock-in mice resemble LUBAC-deficient mice and die midgestation due to TNFR1- and RIPK1 kinase-dependent cell death. Combined loss of caspase-8 and RIPK3 rescues embryonic lethality. OTULIN and LUBAC function in a linear pathway. |
Catalytic-inactive knock-in mice, genetic epistasis (caspase-8/RIPK3 double KO rescue), biochemical LUBAC auto-ubiquitination assay |
Nature |
High |
29950720
|
| 2019 |
OTULIN interacts with SNX27 (sorting nexin 27) via a C-terminal PDZ-binding motif (PDZbm) binding the cargo-binding PDZ domain of SNX27. Crystal structure of OTU domain with PDZ domain reveals a second interface contributing to high-affinity interaction. Via this association, OTULIN antagonizes SNX27-dependent cargo loading, SNX27–VPS26A retromer interaction, and endosome-to-plasma membrane trafficking—a non-catalytic function of OTULIN. |
MS interactome, crystal structure, Co-IP, endosomal trafficking assay, mutagenesis |
Nature communications |
High |
31541095
|
| 2019 |
During apoptosis, OTULIN is cleaved by caspase-3 at Asp-31 into a C-terminal fragment that restricts caspase activation and cell death. During necroptosis, OTULIN is hyper-phosphorylated at Tyr-56, modulating RIPK1 ubiquitin dynamics and promoting cell death. DUSP14 was identified as an OTULIN phosphatase that dephosphorylates Tyr-56 and limits necroptosis. |
Mutagenesis (D31A), caspase assays, necroptosis assays, phosphatase identification by biochemistry |
Cell reports |
Medium |
31825842
|
| 2019 |
OTULIN deficiency in patient-derived fibroblasts reduces LUBAC levels and impairs TNF response. In monocytes, OTULIN deficiency increases TNF/NF-κB signaling. Both cell types are sensitized to TNF-induced death. An OTULIN-Gly281Arg mutation reduces activity and stability in vitro and in cells. |
Patient-derived cells, biochemical assays, TNF stimulation, in vitro stability/activity assays |
EMBO molecular medicine |
Medium |
30804083
|
| 2020 |
LUBAC and OTULIN localize to the phagophore area to regulate autophagy. OTULIN knockdown promotes autophagy initiation but blocks autophagosome maturation; excessive linear-ubiquitinated ATG13 is recruited to the phagophore for prolonged expansion, inhibiting maturation. LUBAC knockdown inhibits autophagy initiation. |
siRNA knockdown, immunofluorescence (LC3 puncta), autophagy flux assays, bacterial infection |
Autophagy |
Medium |
32543267
|
| 2020 |
TRIM32 conjugates non-proteolytic polyubiquitin onto OTULIN; this polyubiquitin blocks the HOIP–OTULIN interaction, thereby activating NF-κB signaling. TRIM32 E3 ligase activity is essential for this effect, and TRIM32-mediated NF-κB activation is dependent on OTULIN (genetic complementation). |
MS proteomics of OTULIN complex, Co-IP, mutagenesis of TRIM32 E3 domain, genetic complementation |
Journal of molecular cell biology |
Medium |
31504727
|
| 2020 |
ABL1/c-Abl phosphorylates OTULIN at Tyr56 upon genotoxic stress, enhancing OTULIN association with β-catenin. OTULIN inhibits linear ubiquitination of β-catenin, attenuating its K48-linked ubiquitination and proteasomal degradation, thereby activating Wnt/β-catenin signaling upon DNA damage. |
Co-IP, ubiquitination assays, kinase inhibition, mutagenesis, xenograft models |
Nature communications |
Medium |
32770022
|
| 2020 |
OTULIN deficiency in liver triggers steatohepatitis and hepatocellular carcinoma independently of TNFR1 signaling; the pathology is associated with aberrant mTOR activation and is significantly reduced by rapamycin, placing OTULIN upstream of mTOR in hepatocytes. |
Liver-specific OTULIN knockout mice, genetic TNFR1 deletion, rapamycin treatment, histological and biochemical analysis |
Cell death and differentiation |
Medium |
32231246
|
| 2020 |
Ablation of OTULIN in liver parenchymal cells triggers FADD- and RIPK1 kinase-dependent hepatocyte apoptosis that initiates liver disease. Genetic ablation of FADD completely rescues and kinase-inactive RIPK1 knock-in significantly protects mice, establishing FADD/RIPK1 as the cell death pathway downstream of OTULIN in hepatocytes. Type I interferons also contribute to disease. |
Hepatocyte-specific OTULIN KO, FADD KO epistasis, RIPK1 kinase-dead knock-in epistasis |
Cell reports |
High |
32075762
|
| 2021 |
OTULIN deubiquitinates ALK1, removing linear ubiquitin chains that LUBAC conjugates onto ALK1. LUBAC-mediated linear ubiquitination of ALK1 inhibits its kinase activity and Smad1/5 activation; OTULIN reverses this to promote angiogenesis. EC-specific OTULIN deletion causes arteriovenous malformations. |
EC-specific OTULIN KO mice, in vitro ubiquitination/deubiquitination assays, Smad1/5 phosphorylation assays, ALK1 constitutively active rescue |
Molecular cell |
High |
34157307
|
| 2021 |
Epidermis-specific OTULIN deficiency causes inflammatory skin lesions driven by TNFR1 signaling in keratinocytes requiring RIPK1 kinase activity. Loss of RIPK3 or MLKL largely rescues skin inflammation, implicating necroptosis as the primary mechanism. Combined loss of RIPK3 and FADD fully prevents lesions, showing redundant apoptosis contribution. MyD88 deficiency suppresses skin lesion development. |
Keratinocyte-specific OTULIN KO, RIPK3 KO, MLKL KO, FADD KO, RIPK1 kinase-dead knock-in, MyD88 KO epistasis |
Nature communications |
High |
34625556 34625557
|
| 2021 |
SNX27 inhibits LUBAC-mediated linear ubiquitin chain formation and TNFα-induced NF-κB activation. Upon TNFα stimulation, the OTULIN–SNX27 complex localizes to the membrane-associated TNF receptor complex where OTULIN deubiquitinates linear polyubiquitin formed by LUBAC. Chemical inhibition of SNX27–retromer translocation (cholera toxin) prevents OTULIN membrane localization. |
Co-IP, membrane fractionation/localization, cholera toxin inhibition, NF-κB reporter assay |
Cell & bioscience |
Medium |
34315543
|
| 2021 |
OTULIN deubiquitinates IRF3 (removing linear polyubiquitin), thereby inhibiting the RIG-I-induced apoptosis pathway (RIPA). In virus-infected cells, RIPA actively degrades OTULIN: caspase-3 cleaves OTULIN at Asp-31, generating a fragment ubiquitinated at K64 and K197 (identified by MS) and subsequently degraded by proteasomes. HOIP ubiquitinates OTULIN to trigger its degradation. |
Overexpression/KD, mutagenesis (D31A, K64/K197), MS identification of ubiquitinated residues, in vitro cleavage assay |
Cell death and differentiation |
Medium |
34545182
|
| 2021 |
OTULIN deubiquitinates proteasome subunits; OTULIN deficiency causes proteasome dysregulation, which activates type I interferon signaling in patient cells and CRISPR-KO cell lines. |
CRISPR KO, patient PBMC analysis, proteasome activity assays, IFN signaling readouts |
Science advances |
Medium |
34797715
|
| 2022 |
OTULIN haploinsufficiency causes accumulation of linear ubiquitin in dermal fibroblasts and leads to OTULIN-dependent accumulation of caveolin-1 in dermal fibroblasts (but not leukocytes), which facilitates cytotoxic damage by staphylococcal α-toxin, revealing a cell-intrinsic non-NF-κB mechanism for OTULIN in non-leukocytic immunity. |
Patient fibroblast analysis, Co-IP/biochemical caveolin-1 measurement, α-toxin cytotoxicity assay, linear Ub accumulation by WB |
Science |
High |
35587511
|
| 2022 |
OTULIN undergoes linear ubiquitination at Lys64/66 in a LUBAC-dependent manner under unstressed conditions, which is required for OTULIN-LUBAC interaction. Upon genotoxic or inflammatory stress, OTULIN self-deubiquitinates this modification intermolecularly via dimerization, causing dissociation from LUBAC and NF-κB overactivation. Oxidative stress induces OTULIN dimerization via cysteine-mediated disulfide bonds. |
Mutagenesis, Co-IP, ubiquitination assays, dimerization assays, cell viability readout |
Proceedings of the National Academy of Sciences |
Medium |
35939695
|
| 2023 |
OTULIN deficiency in myeloid/macrophages licenses RIPK3-mediated cell death, leading to NLRP3 inflammasome activation and IL-1β secretion independently of gasdermin D-mediated pyroptosis. Elevated serum IL-1β in myeloid-specific OTULIN-deficient mice is abolished by deleting either Ripk3 or Nlrp3, establishing the pathway: OTULIN deficiency → RIPK3-dependent death → NLRP3 → IL-1β. |
Myeloid-specific OTULIN KO, RIPK3 KO epistasis, NLRP3 KO epistasis, IL-1β ELISA, gasdermin D KO |
Science immunology |
High |
38000038
|
| 2023 |
STAT3 is a direct substrate of linear ubiquitination; OTULIN removes linear ubiquitin from STAT3 in glioblastoma stem cells. Linear ubiquitination of STAT3 negatively regulates its activity by recruiting the phosphatase TC-PTP to STAT3. Overexpression of OTULIN in GSCs restricts STAT3 linear ubiquitination, drives persistent STAT3 signaling, and maintains stemness. |
Bio-orthogonal linear ubiquitin probe (NAEK-Ub) in live cells, MS substrate identification, Co-IP of TC-PTP with STAT3, OTULIN KD/OE |
Nucleic acids research |
Medium |
36660824
|
| 2023 |
SPATA2 competes with OTULIN for binding to HOIP via a PIM and zinc finger domain, thereby promoting LUBAC auto-ubiquitination and counteracting OTULIN-mediated LUBAC deubiquitination. Increased pro-inflammatory signaling in Cyld−/−Spata2−/− cells depends on OTULIN, establishing SPATA2 as an independent OTULIN antagonist at LUBAC. |
Double-KO mouse models (Cyld/Spata2), epistasis with OTULIN, Co-IP, M1-Ub level analysis |
Cell reports |
Medium |
36640323
|
| 2023 |
OTULIN interacts with SCRIB via its C-terminal PDZ-binding motif in HEK293 cells. Met1-linked ubiquitin chains associate with VANGL2 and PRICKLE1 (PCP complex components). OTULIN localizes to VANGL2-enriched cell-cell contacts in MDCK cells; OTULIN loss causes deficits in Wnt5a-induced filopodia extension and trafficking of VANGL2. |
Interactomic (BioID/AP-MS), Co-IP, live-cell imaging, siRNA knockdown |
Disease models & mechanisms |
Medium |
37589075
|
| 2024 |
OTULIN prevents proteasomal degradation of GPX4 by reducing its ubiquitin level, conferring cisplatin resistance in osteosarcoma. OTULIN deubiquitinates GPX4, stabilizing it and blocking the mitochondrial apoptotic pathway. |
OTULIN KD/OE, GPX4 ubiquitination assay, co-IP, cisplatin resistance assay |
Journal of experimental & clinical cancer research |
Medium |
39721999
|
| 2024 |
The dominant-negative OTULIN C129S mutation ablates deubiquitinase activity without affecting protein stability or binding to LUBAC and linear ubiquitin chains. Loss of catalytic activity leads to LUBAC auto-ubiquitination accumulation, inhibiting LUBAC recruitment to the TNF receptor signaling complex and promoting TNF-induced cell death. |
Patient cell biochemistry, mutagenesis, Co-IP of LUBAC with TNFR1-SC, TNF death assays |
The Journal of experimental medicine |
Medium |
38630025
|
| 2024 |
OTULIN regulates ubiquitination of NCOA4, leading to NCOA4 depletion and FTH1 accumulation, protecting hepatocytes from APAP-induced ferroptosis by modulating the NCOA4-FTH1 complex involved in ferritin autophagy. |
OTULIN KD/OE, NCOA4 ubiquitination assay, Co-IP, in vivo APAP model |
International immunopharmacology |
Low |
40158433
|
| 2024 |
LUBAC promotes and OTULIN restricts activation of AMPK. LUBAC and OTULIN interact with AMPK and control its M1-ubiquitination, regulating AMPK activation in response to glucose starvation and allosteric activation. LUBAC deficiency impairs autophagy induction and metabolic reprogramming during starvation. |
Co-IP, M1-ubiquitination assay of AMPK, LUBAC/OTULIN KO cells, mouse and human samples, Drosophila starvation assay |
bioRxivpreprint |
Medium |
bio_10.1101_2024.11.08.622598
|
| 2026 |
OTULIN deubiquitinates TRAF6 by removing linear ubiquitin chains at K104, K142, and K371, which are conjugated by LUBAC upon RNA virus infection. Linear ubiquitination of TRAF6 facilitates its K63-linked ubiquitination and strengthens its association with MAVS, amplifying antiviral RIG-I signaling. OTULIN acts as a negative regulator of RIG-I-dependent IFN-I production. |
OTULIN KO (CRISPR), lentiviral re-expression rescue, mutagenesis of TRAF6 K104/K142/K371, Co-IP of TRAF6-MAVS, IFN reporter assay, MS identification of ubiquitination sites |
Proceedings of the National Academy of Sciences |
High |
41802043
|
| 2025 |
OTULIN promotes canonical Wnt signaling in keratinocytes by removing linear ubiquitin from β-catenin. In OTULIN-deficient keratinocytes, linearly ubiquitinated β-catenin accumulates and undergoes K48-linked ubiquitination and proteasomal degradation. Reduced Wnt signaling leads to TCF3 degradation, an essential survival factor, thus linking OTULIN's linear DUB activity to epithelial cell viability. |
Keratinocyte-specific KO, β-catenin linear ubiquitination assay, TCF3 measurement, β-catenin stabilization rescue |
bioRxivpreprint |
Medium |
bio_10.1101_2025.01.08.631848
|