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OTOL1

Otolin-1 · UniProt A6NHN0

Length
477 aa
Mass
49.4 kDa
Annotated
2026-06-10
3 papers in source corpus 1 papers cited in narrative 1 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

OTOL1 (Otolin-1) is an inner-ear scaffold protein implicated in otoconia/otolith assembly and balance sensing through Ca2+-dependent oligomerization of its C-terminal gC1q domain (PMID:34445792). This domain mediates both Ca2+ binding and trimerization, and natural substitutions at key residues disrupt these properties: R339S, R342W, and R402P destabilize the apo-gC1q domain, with R342W driving aberrant self-aggregation and R402P abolishing trimerization, while Q426R is stabilizing (PMID:34445792). Ca2+ partially rescues the destabilizing effect of R342W and Q426R at higher concentrations but cannot compensate for R402P, which is fully Ca2+-insensitive, establishing these residues as critical determinants of normal gC1q oligomeric assembly and Ca2+ responsiveness (PMID:34445792). Beyond this biophysical characterization of the gC1q domain (PMID:34445792), no further mechanistic detail on OTOL1 has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 1 step
  1. 2021 Medium

    It was unknown which molecular features govern Otolin-1 assembly; biophysical dissection of the gC1q domain established that it mediates Ca2+-dependent trimerization and that specific residues control stability, oligomerization, and Ca2+ responsiveness.

    Evidence Structural and biophysical analysis of wild-type and natural-variant gC1q domain (stability and self-association assays) with and without Ca2+

    PMID:34445792

    Open questions at the time
    • Single lab with no independent replication of the biophysical findings
    • Effects measured on the isolated gC1q domain rather than full-length Otolin-1 in its native otoconial matrix
    • No direct demonstration linking these residue variants to otoconia/otolith formation defects or balance phenotypes in vivo

Open questions

Synthesis pass · forward-looking unresolved questions
  • How OTOL1 oligomers integrate into the otoconial matrix and contribute to balance sensing at the tissue level remains unresolved.
  • No identified physical partners within the otoconial matrix
  • No structural model of the assembled trimer or higher-order assembly
  • No in vivo or animal-model validation of mutational effects

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
No controlled-vocabulary terms were assigned to this entry.

Evidence

Reading pass · 1 per-paper finding extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2021 The gC1q domain of Otolin-1 (OTOL1) is responsible for trimerization and Ca2+ binding; natural variants R339S, R342W, and R402P destabilize the apo-gC1q domain, while Q426R has a stabilizing effect. Ca2+ can partially rescue the destabilizing effects of R342W and Q426R at higher concentrations, but R402P is completely insensitive to Ca2+. R342W induces aberrant self-aggregation, and R402P disables trimerization, establishing that these residues are critical for normal gC1q oligomeric assembly. Structural and biophysical analysis of wild-type and mutant gC1q domain (natural substitution mutagenesis, stability assays, self-association assays) with and without Ca2+ International journal of molecular sciences Medium 34445792

Source papers

Stage 0 corpus · 3 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2017 Genome-wide Association Study of Parental Life Span. The journals of gerontology. Series A, Biological sciences and medical sciences 10 27816938
2021 Natural Mutations Affect Structure and Function of gC1q Domain of Otolin-1. International journal of molecular sciences 6 34445792
2020 Novel Nasal Epithelial Cell Markers of Parkinson's Disease Identified Using Cells Treated with α-Synuclein Preformed Fibrils. Journal of clinical medicine 6 32640699

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