Affinage

OPRD1

Delta-type opioid receptor · UniProt P41143

Length
372 aa
Mass
40.4 kDa
Annotated
2026-06-10
27 papers in source corpus 6 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

OPRD1 encodes the delta-opioid receptor (DOR), a G protein-coupled receptor whose expression is governed by multiple cis-regulatory and trans-acting controls and whose downstream behavioral output depends on the neuronal cell type in which it is expressed [PMID:39496614, PMID:38585789, PMID:bio_10.1101_2025.11.14.688475]. At the regulatory level, promoter and intronic variants tune transcription through differential transcription factor recruitment: the minor G-allele of the promoter SNP rs569356 enhances nuclear transcription-factor binding and increases transcriptional activity (PMID:20300121), while the intronic variant rs678849 partitions binding between XRCC6 (C allele, lower expression) and hnRNP D0 (T allele, higher expression) (PMID:34407719). In dorsal root ganglion sensory neurons, peripheral nerve injury upregulates the transcriptional repressor REST, which occupies the Oprd1 promoter to repress its transcription; conditional deletion of REST restores Oprd1 expression and attenuates pain hypersensitivity, linking DOR downregulation to nerve-injury pain (PMID:39496614, PMID:38585789). At the circuit level, DOR on parvalbumin interneurons is selectively required for the convulsant and anxiolytic effects of the DOR agonist SNC80 but is dispensable for its pro-locomotive and respiratory effects, demonstrating that distinct DOR-expressing populations segregate the receptor's behavioral consequences [PMID:bio_10.1101_2025.11.14.688475]. The receptor's own signal-transduction biochemistry is not characterized in the available corpus, which is dominated by transcriptional and cell-type-resolved functional studies.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2010 Medium

    Establishing whether a common OPRD1 promoter variant is functional, this work showed that an allele-specific transcription-factor binding event sets expression level — converting a genetic association into a mechanistic regulatory hypothesis.

    Evidence Luciferase reporter assay in HEK293 cells and EMSA with human brain nuclear proteins

    PMID:20300121

    Open questions at the time
    • The specific transcription factor binding the G-allele was not identified
    • Effect not validated at endogenous OPRD1 locus in neurons
  2. 2017 Low

    Probing epigenetic control, this study showed that an OPRD1 promoter CpG region is itself transcriptionally active, framing methylation of these sites as a plausible expression switch.

    Evidence Luciferase reporter gene assay of a CpG-containing promoter fragment

    PMID:28253273

    Open questions at the time
    • Single-method reporter assay without methylation-dependent functional test
    • No identification of factors reading the CpG sites
    • Not tested at endogenous locus
  3. 2021 Medium

    Extending allele-specific regulation beyond the promoter, this work identified the actual proteins discriminating an intronic variant, showing XRCC6 and hnRNP D0 bind opposing alleles to set differential expression.

    Evidence Luciferase reporter assay in BE(2)C neuroblastoma cells with EMSA/supershift and proteomic identification using neuroblastoma and human medial prefrontal cortex lysates

    PMID:34407719

    Open questions at the time
    • Binding partners identified in vitro but not validated by loss-of-function at the endogenous gene
    • Not independently replicated
    • Functional consequence of XRCC6/hnRNP D0 binding in vivo unestablished
  4. 2024 High

    Linking OPRD1 regulation to a disease state, this work showed that nerve injury drives REST-mediated repression of Oprd1 in sensory neurons and that relieving this repression rescues both expression and pain behavior.

    Evidence Conditional Rest knockout in primary sensory neurons with ChIP, qRT-PCR, transcriptomics, and behavioral pain assays in the spared nerve injury model

    PMID:38585789 PMID:39496614

    Open questions at the time
    • Whether restored DOR signaling, rather than other REST targets, mediates the analgesia is not isolated
    • Direct REST binding mapped by ChIP but not at base-pair resolution
  5. 2025 Medium

    Resolving why DOR agonists produce mixed therapeutic and adverse effects, this work showed that DOR on parvalbumin interneurons selectively drives convulsant and anxiolytic responses while leaving locomotor and respiratory effects intact, dissecting the receptor's circuit-level functions.

    Evidence Cell-type-specific conditional DOR knockout (Floxed DOR; PV-Cre) with whole-cell electrophysiology and convulsant, locomotor, anxiety, and respiratory behavioral assays (preprint)

    PMID:bio_10.1101_2025.11.14.688475

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • Cell types mediating pro-locomotive and respiratory effects not identified
    • Downstream signaling from PV-neuron DOR not defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • The signal-transduction biochemistry of the delta-opioid receptor itself — its G-protein coupling, effector engagement, and ligand-binding determinants — remains uncharacterized in this corpus, which focuses on transcriptional regulation and cell-type-specific behavior.
  • No biochemical or structural characterization of DOR signaling in the timeline
  • No agonist/antagonist pharmacology beyond SNC80 behavioral readouts
  • No direct physical receptor partners defined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Localization
GO:0005886 plasma membrane 1
Pathway
R-HSA-74160 Gene expression (Transcription) 3

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2010 The minor G-allele of SNP rs569356 in the OPRD1 promoter region drives significantly greater transcriptional activity than the major A-allele, and EMSA demonstrated that this SNP lies within the binding site of nuclear transcription factors, suggesting the G-allele enhances transcription factor binding to increase OPRD1 expression. Luciferase reporter assay in HEK293 cells; electrophoretic mobility shift assay (EMSA) with human brain nuclear proteins Journal of human genetics Medium 20300121
2021 The intronic OPRD1 variant rs678849 alleles differentially regulate transcription: the C allele drives lower luciferase expression than the T allele. EMSA and proteomic analysis identified XRCC6 as a transcription factor specifically binding the C allele, whereas hnRNP D0 specifically binds the T allele. Luciferase reporter assay in BE(2)C neuroblastoma cells; EMSA with nuclear lysates from BE(2)C cells and human postmortem medial prefrontal cortex; supershift assay with proteomic identification The American journal of drug and alcohol abuse Medium 34407719
2024 Peripheral nerve injury (spared nerve injury model) upregulates the transcriptional repressor REST in dorsal root ganglion (DRG) neurons, which represses Oprd1 transcription. Conditional knockout of full-length REST in primary sensory neurons rescued the SNI-induced reduction in Oprd1 expression and reduced pain hypersensitivity. ChIP analyses confirmed REST occupancy at relevant promoter regions. Conditional knockout mouse (full-length Rest CKO in primary sensory neurons); chromatin immunoprecipitation (ChIP); quantitative RT-PCR; transcriptomic analysis; behavioral pain assays Scientific reports High 38585789 39496614
2025 DOR (OPRD1) expressed on parvalbumin (PV) interneurons is specifically required for the convulsant and anxiolytic-like behavioral effects of the DOR agonist SNC80, but not for its pro-locomotive or respiratory stimulatory effects. Functional loss of DOR on PV neurons was validated by whole-cell electrophysiology. Conditional knockout (Floxed DOR; PV-Cre mice); whole-cell electrophysiology; behavioral assays (convulsant, locomotor, anxiety, respiratory endpoints) bioRxivpreprint Medium bio_10.1101_2025.11.14.688475
2017 The OPRD1 promoter CpG region can regulate gene expression, as demonstrated by luciferase reporter assay showing that a DNA fragment containing three OPRD1 promoter CpG sites drives reporter expression. Luciferase reporter gene assay PloS one Low 28253273

Source papers

Stage 0 corpus · 27 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2007 Opioid receptor gene (OPRM1, OPRK1, and OPRD1) variants and response to naltrexone treatment for alcohol dependence: results from the VA Cooperative Study. Alcoholism, clinical and experimental research 171 17374034
2013 An intronic variant in OPRD1 predicts treatment outcome for opioid dependence in African-Americans. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 66 23612435
2006 Further evidence of association of OPRD1 & HTR1D polymorphisms with susceptibility to anorexia nervosa. Biological psychiatry 60 16806108
2013 Association of polymorphisms in pharmacogenetic candidate genes (OPRD1, GAL, ABCB1, OPRM1) with opioid dependence in European population: a case-control study. PloS one 55 24086514
2012 Case-control association analysis of polymorphisms in the δ-opioid receptor, OPRD1, with cocaine and opioid addicted populations. Drug and alcohol dependence 46 22795689
2013 Genetic variation in OPRD1 and the response to treatment for opioid dependence with buprenorphine in European-American females. The pharmacogenomics journal 40 24126707
2000 Variant detection at the delta opioid receptor (OPRD1) locus and population genetics of a novel variant affecting protein sequence. Human genetics 32 10982041
2013 A commonly carried genetic variant in the delta opioid receptor gene, OPRD1, is associated with smaller regional brain volumes: replication in elderly and young populations. Human brain mapping 31 23427138
2010 Functional impact of a single-nucleotide polymorphism in the OPRD1 promoter region. Journal of human genetics 26 20300121
2017 Genetic Influences of OPRM1, OPRD1 and COMT on Morphine Analgesia in a Multi-Modal, Multi-Tissue Human Experimental Pain Model. Basic & clinical pharmacology & toxicology 17 28084056
2017 Elevated OPRD1 promoter methylation in Alzheimer's disease patients. PloS one 17 28253273
2017 Association of OPRD1 Gene Variants with Opioid Dependence in Addicted Male Individuals Undergoing Methadone Treatment in the North of Iran. Journal of psychoactive drugs 15 28632076
2021 OPRD1 SNPs associated with opioid addiction are cis-eQTLs for the phosphatase and actin regulator 4 gene, PHACTR4, a mediator of cytoskeletal dynamics. Translational psychiatry 12 34031368
2021 Opioid Addiction and Opioid Receptor Dimerization: Structural Modeling of the OPRD1 and OPRM1 Heterodimer and Its Signaling Pathways. International journal of molecular sciences 11 34638633
2018 OPRD1 Genetic Variation and Human Disease. Handbook of experimental pharmacology 9 28035534
2018 OPRD1 gene affects disease vulnerability and environmental stress in patients with heroin dependence in Han Chinese. Progress in neuro-psychopharmacology & biological psychiatry 8 30171993
2020 Genetic polymorphisms in the opioid receptor delta 1 (OPRD1) gene are associated with methadone dose in methadone maintenance treatment for heroin dependence. Journal of human genetics 7 31907389
2024 Nerve injury inhibits Oprd1 and Cnr1 transcription through REST in primary sensory neurons. Scientific reports 4 39496614
2021 The OPRD1 rs678849 variant influences outcome of disulfiram treatment for cocaine dependency in methadone-maintained patients. Psychiatric genetics 4 33953123
2023 Methylation and expression quantitative trait loci rs1799971 in the OPRM1 gene and rs4654327 in the OPRD1 gene are associated with opioid use disorder. Neuroscience letters 3 37660978
2025 Association of OPRM1 and OPRD1 Polymorphisms with Pain and Opioid Adverse Reactions in Colorectal Cancer. Pharmaceuticals (Basel, Switzerland) 1 40006034
2026 A key component fumarine of Sijunzi decoction induces necroptosis in clear cell renal cell carcinoma potentially via targeting SLC6A3, OPRD1 and KDR. Biochemical and biophysical research communications 0 41722251
2026 [OPRD1 gene polymorphism (rs4654327) as a potential predictor of the effectiveness of long-acting naltrexone in patients with alcohol addiction]. Zhurnal nevrologii i psikhiatrii imeni S.S. Korsakova 0 42133415
2024 Nerve injury inhibits Oprd1 and Cnr1 transcription through REST in primary sensory neurons. bioRxiv : the preprint server for biology 0 38585789
2024 Association of OPRD1 Gene Variants with Changes in Body Weight and Psychometric Indicators in Patients with Eating Disorders. Journal of clinical medicine 0 39274402
2021 Association Study of Opioid Receptor Delta-Type 1 (OPRD1) Gene Variants with Nicotine Dependence in an Iranian Population. Journal of molecular neuroscience : MN 0 33506435
2021 Differential expression and transcription factor binding associated with genotype at a pharmacogenetic variant in OPRD1. The American journal of drug and alcohol abuse 0 34407719

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