Affinage

ODAD4

Outer dynein arm-docking complex subunit 4 · UniProt Q96NG3

Length
672 aa
Mass
76.7 kDa
Annotated
2026-06-10
17 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 3/5 claims corpus-supported (60%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ODAD4 (TTC25) is a tetratricopeptide repeat-containing component of the outer dynein arm (ODA)-docking complex required for ODA assembly and motile ciliary function (PMID:36727596, PMID:41002425). Loss of ODAD4 abolishes ciliary outer dynein arms, renders cilia static, and eliminates mucociliary clearance, while its absence also prevents incorporation of the docking-complex partner CLXN/ODAD5 into the axoneme, establishing ODAD4 as essential for assembly of the docking machinery (PMID:36727596, PMID:41002425). ODAD4 is delivered to the axoneme in coordination with intraflagellar transport, co-precipitating with IFT-A, IFT-B, and BBSome components, and its transport into node cilia together with the ODAs depends on CFAP53 (PMID:25860617, PMID:33347437). Consistent with these roles, ODAD4 is required for ciliogenesis and left-right body patterning across vertebrate models, where its developmental expression is controlled by the RFX2 transcription factor (PMID:22227339, PMID:25860617). Pathogenic ODAD4 variants that ablate the protein cause primary ciliary dyskinesia with ODA defects and laterality abnormalities (PMID:41002425).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2011 Medium

    Established that ODAD4/TTC25 is a ciliary gene functionally required for ciliogenesis and left-right patterning, and embedded it within a transcriptional program by identifying RFX2 as a regulator of its expression.

    Evidence Morpholino knockdown in Xenopus embryos with phenotypic analysis of cilia, Hedgehog signaling, and left-right patterning; RFX2 knockdown

    PMID:22227339

    Open questions at the time
    • Did not define the molecular role of TTC25 within cilia
    • Morpholino phenotypes lack genetic rescue confirmation
    • No protein-level mechanism or interaction partners identified
  2. 2015 Medium

    Linked TTC25 physically to intraflagellar transport machinery and broadened its loss-of-function phenotype across vertebrate ciliopathy readouts, suggesting an IFT-related transport role.

    Evidence Immunoprecipitation of TTC25 with IFT-A, IFT-B, and BBSome components; morpholino knockdown in zebrafish

    PMID:25860617

    Open questions at the time
    • Co-IP associations do not establish direct binary interactions or stoichiometry
    • Functional consequence of IFT association for TTC25 cargo behavior unresolved
    • Did not yet place TTC25 in the ODA-docking complex
  3. 2020 High

    Defined TTC25 as an ODA-docking complex component whose ciliary localization is selectively dependent on CFAP53 in node (9+0) cilia, distinguishing transport requirements between cilia subtypes.

    Evidence Co-immunoprecipitation of CFAP53 with TTC25 and immunofluorescence in Cfap53-/- mouse node and tracheal cilia

    PMID:33347437

    Open questions at the time
    • Mechanism of differential dependence between 9+0 and 9+2 cilia not resolved
    • Direct binding interface between CFAP53 and TTC25 not mapped
    • How TTC25 couples ODAs to the axoneme structurally unknown
  4. 2023 Medium

    Confirmed ODAD4 membership in the human ODA-docking complex and showed it is required for assembly of the complex, since its defect prevents axonemal incorporation of CLXN/ODAD5.

    Evidence Immunofluorescence and transmission electron microscopy in ciliary cells from individuals with ODAD1–ODAD4 defects

    PMID:36727596

    Open questions at the time
    • Hierarchy and assembly order among ODAD1–ODAD5 not fully defined
    • No structural model of the docking complex
    • Does not establish which docking subunits ODAD4 contacts directly
  5. 2025 High

    Established the molecular pathogenic mechanism of an ODAD4 variant and directly tied protein loss to ODA assembly failure, static cilia, and abolished mucociliary clearance in primary ciliary dyskinesia.

    Evidence RT-PCR splicing analysis, Western blot, electron microscopy, in vivo mucociliary clearance assay, and nasal nitric oxide measurement

    PMID:41002425

    Open questions at the time
    • Single variant characterized; full mutational spectrum not surveyed
    • Quantitative contribution of ODAD4 to docking-complex stoichiometry unknown
    • Structural basis of ODA recruitment by ODAD4 not determined

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ODAD4 structurally bridges the ODA to the axonemal microtubule doublet and the assembly order of the ODA-docking complex remain undefined.
  • No structural model of ODAD4 within the docking complex
  • Direct binding partners and contact interfaces unmapped
  • Assembly hierarchy among ODAD1–ODAD5 not resolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 2
Localization
GO:0005929 cilium 3 GO:0005856 cytoskeleton 2
Pathway
R-HSA-1266738 Developmental Biology 2 R-HSA-1852241 Organelle biogenesis and maintenance 2
Partners
Complex memberships
outer dynein arm (ODA)-docking complex

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 TTC25 (ODAD4) is required for ciliogenesis, Hedgehog signaling, and left-right patterning in Xenopus, and its expression is controlled by the RFX2 transcription factor. Morpholino knockdown in Xenopus embryos with phenotypic analysis of cilia, HH signaling, and left-right patterning; RFX2 knockdown with analysis of TTC25 expression Developmental biology Medium 22227339
2015 TTC25 (ODAD4) associates by immunoprecipitation with components or entire complexes of IFT-A, IFT-B, or BBSome, suggesting participation in intraflagellar transport or IFT-related activities; zebrafish ttc25 morphants display ciliopathy phenotypes including curved body, abnormal otolith, hydrocephalus, defective left-right patterning, and pronephric cyst formation. Immunoprecipitation of TTC25 with IFT complex components; morpholino knockdown in zebrafish with phenotypic analysis PloS one Medium 25860617
2020 CFAP53 interacts with TTC25, a dynein docking complex component, and facilitates axonemal transport of TTC25 and outer dynein arms (ODAs) into node cilia; in Cfap53-/- mice, TTC25 and ODAs are lost from node (9+0) cilia but largely maintained in tracheal (9+2) cilia, establishing TTC25 as part of the ODA-docking complex and dependent on CFAP53 for its ciliary localization in node cilia. Co-immunoprecipitation of CFAP53 with TTC25; immunofluorescence in Cfap53-/- mouse cilia; genetic loss-of-function with phenotypic analysis PLoS genetics High 33347437
2023 ODAD4 (TTC25) is part of the outer dynein arm (ODA)-docking complex in ciliary axonemes; CLXN (ODAD5) is absent from ciliary axonemes of individuals with defects in ODA-docking machinery components ODAD1, ODAD2, ODAD3, and ODAD4, placing ODAD4 as required for assembly of the ODA-docking complex. Immunofluorescence microscopy in human ciliary cells from individuals with ODAD1–ODAD4 defects; transmission electron microscopy Genetics in medicine Medium 36727596
2025 The ODAD4 frameshift variant c.245delA causes abnormal splicing with in-frame skipping of exon 2, producing a mildly shortened mRNA; however, Western blot shows complete absence of ODAD4 protein, electron microscopy reveals outer dynein arm defects, and functional analysis demonstrates overall static cilia and absence of in vivo mucociliary clearance, confirming ODAD4 is required for ODA assembly and ciliary motility. RT-PCR splicing analysis; Western blot for ODAD4 protein; electron microscopy; in vivo mucociliary clearance assay; nasal nitric oxide measurement Cells High 41002425

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 RFX2 is broadly required for ciliogenesis during vertebrate development. Developmental biology 90 22227339
2015 Characterization of tetratricopeptide repeat-containing proteins critical for cilia formation and function. PloS one 48 25860617
2021 Whole-exome sequencing reveals a monogenic cause in 56% of individuals with laterality disorders and associated congenital heart defects. Journal of medical genetics 25 34215651
2020 CFAP53 regulates mammalian cilia-type motility patterns through differential localization and recruitment of axonemal dynein components. PLoS genetics 21 33347437
2021 The Novel Key Genes of Non-obstructive Azoospermia Affect Spermatogenesis: Transcriptomic Analysis Based on RNA-Seq and scRNA-Seq Data. Frontiers in genetics 18 33732283
2017 LPS-induced modules of co-expressed genes in equine peripheral blood mononuclear cells. BMC genomics 12 28056766
2023 Pathogenic variants in CLXN encoding the outer dynein arm docking-associated calcium-binding protein calaxin cause primary ciliary dyskinesia. Genetics in medicine : official journal of the American College of Medical Genetics 10 36727596
2021 Rapid genetic adaptation to recently colonized environments is driven by genes underlying life history traits. BMC genomics 9 33853517
2025 Single-nucleus mRNA-sequencing reveals dynamics of lipogenic and thermogenic adipocyte populations in murine brown adipose tissue in response to cold exposure. Molecular metabolism 7 40945691
2021 A splice site and copy number variant responsible for TTC25-related primary ciliary dyskinesia. European journal of medical genetics 7 33746037
2017 Variants in TTC25 affect autistic trait in patients with autism spectrum disorder and general population. European journal of human genetics : EJHG 6 28513607
2024 Characterization of pathogenic genetic variants in Russian patients with primary ciliary dyskinesia using gene panel sequencing and transcript analysis. Orphanet journal of rare diseases 5 39180133
2025 Identification of novel biallelic mutations in CFAP53 associated with fetal situs inversus totalis and literature review. Journal of applied genetics 1 39969775
2022 Subtyping children with asthma by clustering analysis of mRNA expression data. Frontiers in genetics 1 36159986
2026 Identification of common genes associated with diabetic nephropathy and diabetic retinopathy. Frontiers in cell and developmental biology 0 42131108
2025 ODAD4-Related Primary Ciliary Dyskinesia: Report of Five Cases and a Founder Variant in Quebec. Cells 0 41002425
2025 Prevalence and Nationality Distribution of Known and Novel Genetic Variants in Children With Primary Ciliary Dyskinesia in the State of Qatar. Clinical genetics 0 41267578

Missed literature

Know a paper Affinage missed for ODAD4? Flag it for the maintainers and the community.

No submissions yet.