Affinage

OCLN

Occludin · UniProt Q16625

Length
522 aa
Mass
59.1 kDa
Annotated
2026-06-10
21 papers in source corpus 8 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

OCLN (occludin) is an integral tight junction protein that controls epithelial and endothelial barrier integrity and also serves as an essential host entry factor for hepatitis C virus (HCV) (PMID:20463075, PMID:32056224). Cell-surface localization and HCV permissiveness depend on the MARVEL domain: splice isoforms retaining it localize to the membrane and support viral interaction, whereas variants lacking it are cytoplasmic and non-permissive (PMID:20463075). Together with CD81, OCLN constitutes a minimal set of factors sufficient to render even non-hepatic cells competent for HCV entry and replication (PMID:32056224). Beyond its membrane role, the OCLN carboxy-terminus links tight junction cargo to the minus-end-directed motor by binding the dynein light intermediate chain (LIC) in a phosphorylation-dependent manner — S471 phosphorylation is required for LIC binding and S490 phosphorylation for trafficking — and this trafficking activity drives endothelial proliferation and collateral angiogenesis, with full-length OCLN loss being embryonic lethal. OCLN abundance is tightly regulated post-transcriptionally and post-translationally: its 3' UTR is directly targeted by miR-122, miR-144, and miR-122-5p to lower protein levels and increase barrier permeability across hepatic, intestinal, and brain microvascular contexts (PMID:25302477, PMID:29258088, PMID:34150006), and its protein stability is controlled by autophagosomal degradation and ubiquitination (PMID:38497494, PMID:40392484). Pathogen-driven OCLN loss is a route to barrier failure, as S. pneumoniae StkP phosphorylates BECN1 to trigger autophagy-dependent OCLN degradation and alveolar barrier dysfunction (PMID:38497494).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2010 High

    Established that OCLN's MARVEL domain dictates both its cell-surface localization and its function as an HCV entry factor, defining the structural determinant of viral permissiveness.

    Evidence Recombinant isoform expression with localization studies and in vitro HCV infectivity assays

    PMID:20463075

    Open questions at the time
    • Does not define the molecular interface between the MARVEL domain and HCV
    • Does not address OCLN's tight-junction barrier function
  2. 2014 High

    Showed that OCLN levels are set post-transcriptionally via direct 3' UTR targeting by miR-122, coupling host miRNA control to HCV entry efficiency.

    Evidence Dual-luciferase 3' UTR reporter, miR-122 overexpression, and HCV pseudoparticle entry assay in hepatocytes

    PMID:25302477

    Open questions at the time
    • Does not establish the upstream regulators of miR-122 in this context
    • Effect on barrier permeability not measured
  3. 2017 Medium

    Extended miRNA control of OCLN to barrier permeability, demonstrating miR-144 directly represses OCLN (and ZO1) to increase intestinal epithelial permeability.

    Evidence Dual-luciferase reporter, miRNA mimic/inhibitor transfection, and OCLN overexpression rescue in IBS-D rat colonic epithelium

    PMID:29258088

    Open questions at the time
    • Single-lab finding
    • Relative contribution of OCLN versus ZO1 to the permeability phenotype not resolved
  4. 2020 Medium

    Placed OCLN downstream of a probiotic-modulated miR-144 axis and confirmed CD81/OCLN as a minimal sufficient module for HCV entry in non-hepatic cells.

    Evidence miRNA microarray with OCLN rescue (L. casei study) and CD81/OCLN transduction of tree shrew BM-MSCs with HCV infection assay

    PMID:32056224 PMID:32807750

    Open questions at the time
    • CD81/OCLN cooperation mechanism at the membrane not defined
    • Probiotic regulation of miR-144 mechanism not established
  5. 2021 Medium

    Generalized OCLN's miRNA regulation to the neurovascular unit, showing miR-122-5p directly targets OCLN to increase brain microvascular endothelial apoptosis and permeability.

    Evidence Dual-luciferase reporter, miRNA mimic transfection, and OCLN overexpression rescue with flow cytometry in BMECs

    PMID:34150006

    Open questions at the time
    • Single-lab finding
    • Link between OCLN loss and apoptosis mechanism not defined
  6. 2024 High

    Defined a pathogen-driven post-translational route to OCLN loss, in which bacterial StkP phosphorylates BECN1 to trigger autophagosomal OCLN degradation and barrier failure.

    Evidence pEV proteomics, co-IP, BECN1 phosphorylation assays, autophagy inhibition, TEER, and stkP deletion in vivo

    PMID:38497494

    Open questions at the time
    • Mechanism targeting OCLN specifically to autophagosomes not defined
    • Whether host autophagy regulators reproduce this in the absence of bacteria unaddressed
  7. 2025 Medium

    Revealed a previously uncharacterized motor-adaptor function: the OCLN C-terminus binds dynein LIC in a phosphorylation-dependent manner to traffic tight junction cargo and drive endothelial proliferation and collateral angiogenesis.

    Evidence Reciprocal co-IP, S471A/S490A mutagenesis with functional readouts, in vivo collateral angiogenesis, and exon 5-targeted deletion (preprint)

    Open questions at the time
    • Preprint not yet peer-reviewed
    • Kinase(s) phosphorylating S471/S490 not identified
    • Cargo identity transported by the OCLN-dynein complex not defined
  8. 2025 Low

    Implicated ubiquitination as an additional OCLN stability control point, with a miR-20a/DUSP3 axis modulating OCLN ubiquitination during sepsis-associated barrier dysfunction.

    Evidence CLP mouse model and LPS-treated NCM460 cells with OCLN knockdown/overexpression, western blot, and immunofluorescence

    PMID:40392484

    Open questions at the time
    • DUSP3-to-OCLN ubiquitination link is indirect and ubiquitination assay details unspecified
    • Responsible E3 ligase not identified
    • Single-lab finding

Open questions

Synthesis pass · forward-looking unresolved questions
  • How OCLN integrates its membrane barrier role, viral receptor function, and dynein-dependent cargo trafficking into a single regulated program remains unresolved.
  • No structural model of the OCLN-dynein LIC complex
  • Identity of kinases and E3 ligases controlling OCLN trafficking and turnover unknown
  • Causal Mendelian disease link not established in the corpus

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0001618 virus receptor activity 2 GO:0005198 structural molecule activity 1 GO:0060090 molecular adaptor activity 1
Localization
GO:0005829 cytosol 1 GO:0005886 plasma membrane 1
Pathway
R-HSA-1500931 Cell-Cell communication 2 R-HSA-1643685 Disease 2 R-HSA-9612973 Autophagy 1
Complex memberships
tight junction

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2010 OCLN splice variants that retain the MARVEL domain are expressed on the cell membrane and are permissive for HCV entry, while variants lacking the MARVEL domain are expressed in the cytoplasm and are non-permissive for HCV infection. The MARVEL domain of OCLN is required for HCV interaction and cell-surface localization. Recombinant protein expression, in vitro HCV infectivity assays, cell membrane localization studies Journal of virology High 20463075
2014 miR-122 binds the 3' UTR of OCLN mRNA and downregulates OCLN protein expression, thereby reducing HCV entry into hepatocytes. Overexpression of miR-122 decreased OCLN protein by ~80% and reduced HCV entry by ~42%. Dual-luciferase 3' UTR reporter assay, lentiviral miR-122 overexpression, HCV pseudoparticle entry assay, immunofluorescence Liver international High 25302477
2017 miR-144 directly targets OCLN and ZO1, downregulating their expression and increasing intestinal epithelial permeability. Overexpression of OCLN and ZO1 eliminated the permeability-promoting effect of miR-144 in IBS-D rat colonic epithelial cells. Dual-luciferase reporter assay, miRNA mimic/inhibitor transfection, western blotting, rescue experiments with OCLN overexpression Cellular physiology and biochemistry Medium 29258088
2020 Lactobacillus casei LC01 enhances intestinal epithelial barrier function by downregulating miR-144 and upregulating OCLN and ZO1 expression. Overexpression of OCLN and ZO1 under LC01 treatment partially eliminated the permeability-promoting effect of miR-144. miRNA microarray, qRT-PCR, western blot, transfection of RNA oligoribonucleotides and pcDNA3.1 plasmid Journal of microbiology and biotechnology Medium 32807750
2021 miR-122-5p directly targets OCLN, downregulating its expression in brain microvascular endothelial cells (BMECs). Overexpression of OCLN partially reversed miR-122-5p-induced increases in BMEC apoptosis and permeability. Dual-luciferase reporter assay, miRNA mimic transfection, OCLN overexpression rescue experiments, flow cytometry, western blot American journal of translational research Medium 34150006
2024 S. pneumoniae extracellular vesicle cargo protein StkP (a eukaryotic-like serine-threonine kinase) phosphorylates BECN1 at Ser93 and Ser96, initiating autophagy that leads to autophagosomal degradation of OCLN and consequent alveolar epithelial barrier dysfunction. Deletion of stkP prevented OCLN degradation and protected mice from death. Proteomics of pEV cargo, co-immunoprecipitation, BECN1 phosphorylation assays, autophagy inhibition with BafA1/CQ, TEER measurements, stkP deletion mutant in vivo Autophagy High 38497494
2020 CD81 and OCLN together are minimum essential factors required for HCV entry into non-hepatic tree shrew bone marrow-derived mesenchymal stem cells. Transduction of CD81/OCLN was sufficient to support HCV RNA replication and infectious virus production. Viral transduction of CD81/OCLN into BM-MSCs, HCV infection assay, RNA quantification Journal of medical virology Medium 32056224
2025 The OCLN carboxy-terminus forms a complex with the light intermediate chain (LIC) of dynein, linking tight junction cargo to the minus-end-directed motor protein. S471 phosphorylation is required for LIC binding, and S490 phosphorylation is required for trafficking. Expressing OCLN S490A mutant prevented endothelial cell proliferation and collateral angiogenesis. OCLN gene deletion targeting exon 5 (preventing full-length and isoform 4 expression) resulted in embryonic lethality. Co-immunoprecipitation, mutational analysis of phosphorylation sites (S471A, S490A), endothelial cell proliferation assays, in vivo collateral angiogenesis model, exon 5-targeted gene deletion bioRxivpreprint Medium
2025 miR-20a overexpression suppresses DUSP3 expression and inhibits ubiquitination of OCLN in intestinal epithelial cells during sepsis, thereby preserving OCLN protein levels and alleviating intestinal barrier dysfunction. CLP mouse model, LPS-treated NCM460 cells, western blotting, RT-qPCR, immunofluorescence, OCLN knockdown/overexpression In vitro cellular & developmental biology. Animal Low 40392484

Source papers

Stage 0 corpus · 21 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2017 MiR-144 Increases Intestinal Permeability in IBS-D Rats by Targeting OCLN and ZO1. Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 67 29258088
2024 Streptococcus pneumoniae extracellular vesicles aggravate alveolar epithelial barrier disruption via autophagic degradation of OCLN (occludin). Autophagy 34 38497494
2020 Lactobacillus casei LC01 Regulates Intestinal Epithelial Permeability through miR-144 Targeting of OCLN and ZO1. Journal of microbiology and biotechnology 33 32807750
2010 Splicing diversity of the human OCLN gene and its biological significance for hepatitis C virus entry. Journal of virology 30 20463075
2021 Exosomes containing miR-122-5p secreted by LPS-induced neutrophils regulate the apoptosis and permeability of brain microvascular endothelial cells by targeting OCLN. American journal of translational research 22 34150006
2017 Band-like calcification with simplified gyration and polymicrogyria: report of 10 new families and identification of five novel OCLN mutations. Journal of human genetics 21 28179633
2014 MiR-122 decreases HCV entry into hepatocytes through binding to the 3' UTR of OCLN mRNA. Liver international : official journal of the International Association for the Study of the Liver 18 25302477
2017 Increased cerebral expressions of MMPs, CLDN5, OCLN, ZO1 and AQPs are associated with brain edema following fatal heat stroke. Scientific reports 16 28490769
2017 Downregulation of OCLN and GAS1 in clear cell renal cell carcinoma. Oncology reports 11 28184927
2020 A homozygote frameshift mutation in OCLN gene result in Pseudo-TORCH syndrome type I: A case report extending the phenotype with central diabetes insipidus and renal dysfunction. European journal of medical genetics 9 32240828
2017 Comprehensive molecular screening strategy of OCLN in band-like calcification with simplified gyration and polymicrogyria. Clinical genetics 9 28386946
2020 Tree shrew bone marrow-derived mesenchymal stem cells express CD81, OCLN, and miR-122, facilitating the entire hepatitis C virus life cycle. Journal of medical virology 8 32056224
2017 Effect of calprotectin subunit S100A9 on the expression and methylation of OCLN in human melanoma cell line A-375. Turkish journal of biology = Turk biyoloji dergisi 6 30814850
2021 OCLN gene variants identified in three patients with severe neurodevelopmental disorder associated with epilepsy, intellectual disability and malformation of cortical development. Epileptic disorders : international epilepsy journal with videotape 4 34704946
2022 LncRNA ALDB-898 modulates intestinal epithelial cell damage caused by Clostridium perfringens type C in piglet by regulating ssc-miR-122-5p/OCLN signaling. Molecular immunology 3 35834877
2017 Alginate-embedded HuH-7 cells increase MMP-9 and reduce OCLN expression in vitro. Cancer cell international 3 28053600
2021 A Fetus with Congenital Microcephaly, Microphthalmia and Cataract Was Detected with Biallelic Variants in the OCLN Gene: A Case Report. Diagnostics (Basel, Switzerland) 2 34573918
2021 MiR-224-5p Targeting OCLN Promotes the Proliferation, Migration, and Invasion of Clear Cell Renal Cell Carcinoma Cells. Urologia internationalis 1 34515239
2026 Testicular Gap (CX43) and Tight Junction (OCLN, CLDN3, 5 and 11) Components in the Dog Are Affected by GnRH-Mediated Downregulation. Animals : an open access journal from MDPI 0 41594443
2026 Fibro-tubular tumors of the thyroid: an emerging thyroid neoplasm characterized by distinctive morphology and recurrent OCLN::PRKCI gene fusions spanning the adenoma-carcinoma spectrum. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 0 42128054
2025 Overexpression of miR-20a targeting DUSP3 inhibits OCLN ubiquitination levels and alleviates sepsis induced intestinal barrier dysfunction. In vitro cellular & developmental biology. Animal 0 40392484

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