Affinage

NXN

Nucleoredoxin · UniProt Q6DKJ4

Length
435 aa
Mass
48.4 kDa
Annotated
2026-06-10
11 papers in source corpus 2 papers cited in narrative 3 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

NXN (nucleoredoxin) is a redox-active protein that functions as a regulatory node controlling both EMT-associated transcription factors and WNT/β-catenin signaling in development and cancer (PMID:35927236). In hepatocellular carcinoma cells, NXN forms a ternary complex with the transcription factor Snail and the deubiquitylase DUB3, antagonizing DUB3-mediated deubiquitylation of Snail and thereby driving Snail toward ubiquitin-proteasome degradation; this Snail-suppressing activity underlies NXN's anti-proliferative and anti-metastatic effects, which are lost upon Snail depletion (PMID:35927236). NXN's own abundance is set by the RING E3 ligase KCMF1, which binds NXN and targets it for K63-linked ubiquitination; loss of NXN activates β-catenin signaling and promotes ovarian cancer cell proliferation, migration, and invasion (PMID:41721648). Consistent with a role upstream of WNT, Nxn-deficient mice show reduced canonical and non-canonical WNT signaling in the developing pituitary, delayed differentiation of pituitary stem cells into hormone-producing cells, and craniofacial defects including cleft palate. Beyond these contexts, the biochemical basis of NXN's redox activity has not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2022 Medium

    Established that NXN acts as a tumor suppressor by controlling the stability of the EMT driver Snail, answering how NXN restrains cancer cell proliferation and metastasis at the molecular level.

    Evidence Reciprocal Co-IP defining an NXN-Snail-DUB3 ternary complex, with Snail-depletion rescue and in vivo metastasis assays in hepatocellular carcinoma cells

    PMID:35927236

    Open questions at the time
    • Mechanism by which NXN inhibits DUB3 catalytic activity not resolved
    • Whether NXN redox activity is required for Snail/DUB3 regulation untested
    • Single lab; effect in other cancer types not assessed
  2. 2026 Medium

    Identified how NXN protein levels are themselves regulated, showing KCMF1 targets NXN for K63-linked ubiquitination and that NXN loss derepresses β-catenin signaling in ovarian cancer.

    Evidence IP-LC/MS and label-free proteomics substrate identification, Co-IP validation, and KCMF1/NXN perturbation with functional and xenograft assays

    PMID:41721648

    Open questions at the time
    • K63-linked ubiquitination typically signals non-degradative fates; how it reduces NXN levels here is not mechanistically dissected
    • Direct link between NXN loss and β-catenin activation not biochemically mapped
    • Ubiquitination site(s) on NXN not defined
  3. 2025 Medium

    Placed NXN upstream of WNT signaling in vivo, demonstrating it is required for pituitary stem cell differentiation and normal craniofacial development.

    Evidence Nxn knockout mouse with WNT reporter assays, single-cell RNA-seq differentiation trajectories, and histology of pituitary and craniofacial structures (preprint)

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • Molecular mechanism by which NXN modulates canonical vs non-canonical WNT not defined
    • Relationship between developmental WNT role and cancer β-catenin role unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • The biochemical basis of NXN's redox (nucleoredoxin) activity and how it mechanistically connects its roles in Snail degradation, KCMF1 regulation, and WNT signaling remain unestablished.
  • No structural or enzymatic characterization of NXN redox function in the corpus
  • No unified model linking the three reported contexts
  • Direct substrates or redox targets of NXN not identified

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 1
Pathway
R-HSA-162582 Signal Transduction 2
Partners

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2022 NXN (nucleoredoxin) interacts with both Snail and DUB3 (a deubiquitylase), and promotes ubiquitin-proteasome-mediated degradation of Snail by inhibiting DUB3-mediated deubiquitylation of Snail. Co-immunoprecipitation confirmed the NXN-Snail-DUB3 ternary complex. Loss of Snail abolished the anti-proliferative and anti-metastatic effects of NXN in hepatocellular carcinoma cells. Co-immunoprecipitation, ectopic expression/knockdown with proliferation and metastasis assays (CCK-8, EdU, Transwell, wound healing, tail vein injection), in vitro and in vivo functional assays Cell death & disease Medium 35927236
2026 KCMF1, a RING zinc-finger E3 ubiquitin ligase, interacts with NXN and promotes its degradation through K63-linked ubiquitination, thereby reducing NXN protein levels. Silencing NXN activated the β-catenin signaling pathway and facilitated ovarian cancer cell proliferation, migration, and invasion. NXN was identified as a substrate of KCMF1 by IP-LC/MS and label-free proteomics. IP-LC/MS, label-free proteomics, co-immunoprecipitation, KCMF1/NXN knockdown/overexpression with functional assays (cell viability, EMT, migration, invasion), in vivo xenograft experiments Cell cycle (Georgetown, Tex.) Medium 41721648
2025 Nxn deficiency in mice reduces both canonical and non-canonical WNT signaling in the developing pituitary gland, impairs differentiation of pituitary stem cells into hormone-producing cells, and causes pituitary dysmorphology and craniofacial abnormalities including cleft palate. Single-cell RNA-seq revealed a delayed differentiation trajectory in Nxn mutant mice. Nxn knockout mouse model, WNT signaling reporter assays, single-cell RNA sequencing, histological analysis of pituitary and craniofacial structures bioRxivpreprint Medium

Source papers

Stage 0 corpus · 11 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 NXN-188, a selective nNOS inhibitor and a 5-HT1B/1D receptor agonist, inhibits CGRP release in preclinical migraine models. Cephalalgia : an international journal of headache 42 23155193
2013 The nitric oxide synthase inhibitor and serotonin-receptor agonist NXN-188 during the aura phase of migraine with aura: A randomized, double-blind, placebo-controlled cross-over study. Scandinavian journal of pain 26 29913885
2023 NRX-0492 degrades wild-type and C481 mutant BTK and demonstrates in vivo activity in CLL patient-derived xenografts. Blood 25 36375120
2010 Safety and pharmacokinetics of NXN-188 after single and multiple doses in five phase I, randomized, double-blind, parallel studies in healthy adult volunteers. Clinical therapeutics 16 20171420
2002 NBLAST: a cluster variant of BLAST for NxN comparisons. BMC bioinformatics 10 12019022
2022 NXN suppresses metastasis of hepatocellular carcinoma by promoting degradation of Snail through binding to DUB3. Cell death & disease 7 35927236
2022 NXN Gene Epigenetic Changes in an Adult Neurogenesis Model of Alzheimer's Disease. Cells 6 35406633
2023 NRX-101, a Rapid-Acting Anti-Depressant, Does Not Cause Neurotoxicity Following Ketamine Administration in Preclinical Models. International journal of toxicology 5 37226048
2026 KCMF1 promotes malignant progression by NXN ubiquitin-dependent degradation in ovarian cancer. Cell cycle (Georgetown, Tex.) 0 41721648
2025 Circular RNA NXN (circNXN) promotes diabetic retinopathy by regulating the miR-338-3p/FGFR1 axis. Archives of physiology and biochemistry 0 39988878
2024 Molecular characterization, transcriptional profiling, and antioxidant activity assessment of nucleoredoxin (NXN) as a novel member of thioredoxin from red-lip mullet (Planiliza haematocheilus). Fish & shellfish immunology 0 39736406

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