| 2006 |
Nrf1 is targeted to the endoplasmic reticulum via its N-terminal domain (NTD, amino acids 1-124), which negatively regulates its activity by anchoring it to the ER. Keap1 does not control Nrf1 activity or subcellular distribution, distinguishing Nrf1 regulation from Nrf2. Attachment of the NTD to Nrf2 redirected Nrf2 from the nucleus to the ER. |
Immunocytochemistry with ER marker co-localization, ectopic expression of wild-type and deletion mutants in wild-type and mutant MEFs, domain-swap experiments |
The Biochemical journal |
High |
16872277
|
| 2016 |
The aspartyl protease DDI2 (DNA-damage inducible 1 homolog 2) is required to proteolytically cleave and activate Nrf1 in response to proteasome dysfunction. Deletion of DDI2 reduced the cleaved form of Nrf1 and impaired proteasome subunit upregulation; protease-dead DDI2 could not rescue these defects. |
DDI2 knockout cell lines, add-back of wild-type vs. protease-dead DDI2 mutant, western blot for Nrf1 cleavage forms, proteasome activity assays |
eLife |
High |
27528192 27528193
|
| 2016 |
In C. elegans, ER-associated SKN-1A/Nrf1 is activated by the aspartic protease DDI-1, which cleaves it following proteasome dysfunction. Genes required for SKN-1A activation include regulators of ER traffic and a peptide N-glycanase, establishing a conserved ER-to-nucleus proteasome surveillance pathway. |
Comprehensive genetic screen (C. elegans), epistasis analysis, protease requirement assays |
eLife |
High |
27528192
|
| 2015 |
mTORC1 activation promotes NRF1-dependent transcriptional upregulation of proteasome subunit genes, increasing cellular proteasome content. This was demonstrated through genetic activation of mTORC1 (TSC loss-of-function) as well as physiological stimuli (growth factors, feeding). |
Genetic loss-of-function (TSC knockout), pharmacological mTORC1 inhibition with rapamycin, NRF1 knockdown, proteasome content measurements |
Cell cycle (Georgetown, Tex.) |
Medium |
26017155
|
| 2015 |
DNA methylation competes with NRF1 binding in vivo; NRF1 occupies thousands of additional sites in unmethylated genomes. Restoring de novo methyltransferase activity initiates remethylation at NRF1-bound sites and outcompetes NRF1 binding. Removal of neighboring motifs in cis or a cooperating TF in trans causes local hypermethylation and loss of NRF1 binding. |
DNase-I hypersensitive site mapping in murine stem cells with/without DNA methylation, genetic manipulation of methyltransferases, motif deletion experiments |
Nature |
High |
26675734
|
| 2018 |
O-GlcNAc transferase (OGT) and host cell factor C1 (HCF-1) form a complex with NRF1; O-GlcNAcylation catalyzed by OGT stabilizes NRF1 and is essential for NRF1-mediated upregulation of proteasome subunit genes. OGT inhibition sensitized cancer cells to proteasome inhibitors in vitro and in xenograft models. |
Immunoprecipitation and mass spectrometry, OGT inhibition, xenograft mouse model, meta-analysis of cancer proteomics data |
Molecular and cellular biology |
High |
29941490
|
| 2017 |
Nrf1 is negatively regulated by O-GlcNAcylation via OGT interaction through HCF-1; O-GlcNAcylation decreases Nrf1 protein stability and transactivation activity by promoting ubiquitination. The PEST2 degron within Nrf1 is identified as the O-GlcNAcylation site. |
Co-immunoprecipitation, OGT overexpression, proteasomal inhibition, ubiquitination assays, domain mapping |
Free radical biology & medicine |
Medium |
28625484
|
| 2015 |
Nrf1 O-GlcNAcylation by OGT negatively regulates Nrf1/TCF11 protein stability and transactivation activity, promoting ubiquitination and turnover. This effect is glucose-concentration dependent. |
OGT interaction identified by pulldown, co-immunoprecipitation, ubiquitination assays, reporter assays |
FEBS letters |
Medium |
26231763
|
| 2016 |
Under conditions of complete proteasome blockade, Nrf1 (p120) can still be retrotranslocated into the cytosol and proteolytically cleaved to the active p110 form in a proteasome-independent manner, indicating a proteasome-independent processing pathway exists. |
Complete proteasome active-site inhibition, subcellular fractionation, western blot for Nrf1 processing forms, transcription reporter assays |
Current biology : CB |
Medium |
27676297
|
| 2024 |
SCFFBS2 (an N-glycan-recognizing E3 ligase) cooperates with the RBR-type E3 ligase ARIH1 to ubiquitinate Nrf1 through oxyester bonds (non-canonical ubiquitination) at N-GlcNAc residues generated by ENGASE. This atypical ubiquitin chain assembly requires UBE2L3 and inhibits DDI2-mediated Nrf1 activation. |
In vitro reconstitution of polyubiquitination on glycopeptides, cell-based ubiquitination assays, mass spectrometry, mutagenesis |
Molecular cell |
High |
39116872
|
| 2019 |
SIAH2, a hypoxia-activated E3 ubiquitin ligase, degrades NRF1 through ubiquitination on lysine 230, reducing nuclear-encoded mitochondrial gene expression including pyruvate dehydrogenase beta, promoting the Warburg effect and metabolic reprogramming. |
Ubiquitination assays, site-directed mutagenesis (K230), hypoxia experiments, gene expression profiling, tumor microenvironment analysis |
Nature communications |
High |
30833558
|
| 2019 |
ATM, when activated by oxidative stress (but not by DNA damage), phosphorylates NRF1, leading to NRF1 dimerization, nuclear translocation, and upregulation of nuclear-encoded mitochondrial genes to enhance electron transport chain capacity and restore mitochondrial function. |
ATM activation assays distinguishing oxidative vs. DNA damage stimuli, phosphorylation assays, subcellular fractionation, mitochondrial function assays in ATM-null cells |
The Journal of cell biology |
High |
30642892
|
| 2021 |
PGC-1α and NRF1 transcriptionally upregulate FUNDC1 (a mitophagy receptor) by NRF1 binding to the consensus site in the Fundc1 promoter, coupling mitochondrial biogenesis with mitophagy. Specific knockout of Fundc1 in BAT impaired mitochondrial turnover and adaptive thermogenesis. |
ChIP demonstrating NRF1 binding to Fundc1 promoter, conditional knockout mouse, mitochondrial function assays, thermogenesis phenotyping |
EMBO reports |
High |
33554448
|
| 2018 |
Cold adaptation induces Nrf1 in brown adipose tissue (BAT) to increase proteasomal activity, which is crucial for maintaining ER homeostasis during thermogenic activity. Brown-adipocyte-specific deletion of Nrf1 caused ER stress, tissue inflammation, diminished mitochondrial function, and BAT whitening under thermogenic conditions. |
Tissue-specific conditional knockout mouse, cold exposure experiments, proteasome activity assays, ER stress markers, mitochondrial function measurements |
Nature medicine |
High |
29400713
|
| 2018 |
NGLY1 regulates mitochondrial homeostasis through NRF1; NGLY1-deficient cells show impaired mitophagy and fragmented mitochondria with cGAS-STING and MDA5-MAVS pathway activation. Pharmacological activation of NRF2 (a non-glycosylated homolog) restores mitochondrial homeostasis in NGLY1-deficient cells. |
NGLY1 knockout human and mouse cells, mitophagy assays, innate immune pathway activation measurements, NRF1 functional rescue experiments |
The Journal of experimental medicine |
High |
30135079
|
| 2003 |
Nrf1 is essential for hepatocyte survival during development; Nrf1-deficient cells contributed to fetal but not adult liver. Loss of Nrf1 caused liver cell apoptosis, increased oxidative stress, impaired antioxidant gene expression, and sensitized cells to TNF-mediated cytotoxicity. |
Chimeric mouse analysis, primary hepatocyte culture, oxidative stress measurements, antioxidant gene expression assays |
Molecular and cellular biology |
High |
12808106
|
| 2003 |
Nrf1 and Nrf2 have overlapping functions in antioxidant gene expression during early development; compound Nrf1/Nrf2 double-knockout mice die at E9-10 with extensive apoptosis and severely impaired antioxidant defense gene expression compared with single knockouts. Cell death was mediated by ROS activation of p53/Noxa. |
Double-knockout mouse generation, reactive oxygen species measurement, antioxidant gene expression, rescue by reduced oxygen or antioxidants, p53/Noxa induction assays |
The Journal of biological chemistry |
High |
12968018
|
| 2005 |
Nrf1 and Nrf2 regulate rat GCLC transcription indirectly by modulating the expression of key AP-1 (c-Jun, c-Fos) and NF-κB (p50, p65) family members. Overexpression of Nrf1 or Nrf2 restored GCLC promoter activity but not if AP-1 and NF-κB binding sites were mutated. |
Nrf1/Nrf2 null fibroblasts, reporter gene assays with site-directed mutagenesis, mRNA/protein expression analysis, nuclear binding activity assays |
Molecular and cellular biology |
High |
15988009
|
| 2014 |
Liver-specific Nrf1 knockout causes lipid accumulation in hepatocytes with altered fatty acid composition due to upregulation of FA metabolism genes. Nrf1 normally suppresses the cystine/glutamate antiporter xCT by occupying an ARE in its promoter; upon severe oxidative stress, Nrf1 is displaced and Nrf2 is recruited. |
Inducible liver-specific Nrf1 knockout mouse, lipid analysis, gene expression profiling, ARE reporter assays |
Molecular and cellular biology |
High |
25092871
|
| 2016 |
Small Maf (sMaf) proteins are indispensable heterodimeric partners for Nrf1 in the liver; liver-specific sMaf triple-deficient mice recapitulate the Nrf1 liver-specific KO phenotype (hepatic steatosis, dysregulation of metabolic and proteasomal genes), providing genetic evidence that sMaf proteins mediate Nrf1 function. |
Liver-specific conditional sMaf triple-knockout mice, gene expression profiling, phenotypic comparison with Nrf1 KO |
Genes to cells : devoted to molecular & cellular mechanisms |
High |
27723178
|
| 2022 |
The Nrf1-MafG heterodimer binds CNC-sMaf-binding elements (CsMBEs) to activate proteasome subunit genes and broader proteostasis-related genes (ER-associated degradation, chaperone, ubiquitin-mediated degradation pathways). SINE B2 transposable elements harbor CsMBEs and contribute to target gene diversity. |
Tethered Nrf1-MafG heterodimer in small Maf triple-knockout fibroblasts, ChIP-seq, RNA-seq |
Molecular and cellular biology |
High |
35129372
|
| 2021 |
NRF1 has an integral role in ncPRC1.3 (non-canonical Polycomb repressive complex 1.3) recruitment to chromatin in neurons, being required for AUTS2-Polycomb-mediated transcriptional activation of developmental genes. NRF1 is necessary for motor neuron differentiation from mouse embryonic stem cells in this context. |
AUTS2 HX domain mutation analysis, Co-IP, ChIP, motor neuron differentiation assays from mouse ESCs |
Molecular cell |
High |
34637754
|
| 2015 |
EglN2/PHD1 forms an activator complex with PGC1α and NRF1 on chromatin to promote transcription of ferridoxin reductase (FDXR) and maintain mitochondrial function in breast cancer cells. NRF1 motif enrichment was identified in EglN2-activated genes by integrative genomic analyses. |
ChIP-seq, gene expression profiling, NRF1 motif enrichment analysis, EglN2 depletion, mitochondrial respiration assays |
The EMBO journal |
High |
26492917
|
| 2020 |
ATF4 represses NRF1 transcriptional activity by binding to the NRF1 promoter region, thereby downregulating TFAM expression and causing mitochondrial dysfunction in alcoholic liver disease. |
Hepatocyte-specific ATF4 knockout mice, TFAM overexpression mice, ChIP demonstrating ATF4 binding to NRF1 promoter, gene expression analysis, mitochondrial function assays |
Gut |
High |
33177163
|
| 2023 |
Virus-activated kinase TBK1 phosphorylates NRF1 at Ser318, triggering inactivation of the NRF1-TFAM axis during HSV-1 infection. A knock-in strategy mimicking TBK1-NRF1 signaling showed that interrupting this connection ablated mtDNA release and attenuated innate antiviral response. |
TBK1 kinase assay, site-directed mutagenesis (Ser318), knock-in mouse model, innate immune activation assays, mtDNA release measurement |
The EMBO journal |
High |
37409632
|
| 2019 |
NRF1 coordinates with DNA methylation to regulate spermatogenesis; conditional NRF1 ablation in gonocytes dramatically downregulated germline genes including Asz1, blocked germ cell proliferation, and caused male infertility in mice. NRF1 binds directly to promoters of germline-specific genes. |
Conditional knockout mouse, ChIP, gene expression analysis, fertility phenotyping |
FASEB journal |
High |
28754714
|
| 2015 |
Nrf1 is a transcriptional activator of Herpud1 (an ER homeostasis protein) through antioxidant response elements in the Herpud1 promoter; Nrf1 knockout cells show decreased Herpud1 expression and inability to induce Herpud1 in response to ER stress. |
Nrf1 knockout cells, transactivation reporter assays, chromatin immunoprecipitation, ER stress induction |
FEBS letters |
High |
25637874
|
| 2009 |
MCRS2 physically interacts with Nrf1 through the CNC-bZIP domain of Nrf1 (residues 354-447) and represses Nrf1-mediated transcriptional activation. MCRS2 colocalizes with Nrf1 in the nucleus without altering Nrf1 redistribution. |
Yeast two-hybrid screen, GST pull-down, co-immunoprecipitation, immunofluorescence, reporter gene assays |
BMC cell biology |
Medium |
19187526
|
| 2011 |
Nrf1 is ubiquitinated and degraded by the 26S proteasome; proteasomal inhibition stabilizes full-length Nrf1 but paradoxically inhibits its transactivation activity, supporting the model that the proteasome processes Nrf1 into its active form by removing its inhibitory N-terminal ER-anchoring domain. Hypoxia activates Nrf1 reporter activity. |
Proteasomal inhibitor treatment, immunoprecipitation for ubiquitination, EpRE-luciferase reporter assays, half-life determination, hypoxia experiments |
PloS one |
Medium |
22216197
|
| 2014 |
Nrf1 physically interacts with androgen receptor (AR) and enhances AR DNA-binding activity; siRNA-mediated Nrf1 silencing attenuated AR transactivation while p65-Nrf1 overexpression enhanced it. Nrf2 suppresses AR transactivation by stimulating nuclear accumulation of p120-Nrf1. |
siRNA knockdown, Nrf1 overexpression, AR transactivation reporter assays, nuclear fractionation, Co-IP for Nrf1-AR interaction |
PloS one |
Medium |
24466341
|
| 2019 |
NRF1 transcriptionally activates StAR (steroidogenic acute regulatory protein) by directly binding to two NRF1-binding sites on the mouse Star promoter at positions -1445/-1422 and -44/-19, positively regulating testosterone synthesis. |
Dual-luciferase reporter assays, ChIP, EMSA supershift assays, site-directed mutagenesis of NRF1 binding sites, NRF1 overexpression/knockdown |
The Journal of steroid biochemistry and molecular biology |
High |
31028793
|
| 2017 |
HBZ (HTLV-1 bZIP factor) physically interacts with NRF-1 and inhibits NRF-1 DNA-binding ability, thereby suppressing TDP1 gene expression; NRF-1 is identified as a direct positive transcriptional regulator of TDP1 through a conserved NRF-1 binding site in the TDP1 core promoter. |
Co-immunoprecipitation (HBZ-NRF1), dominant-negative NRF1, NRF1 overexpression/shRNA, TDP1 promoter reporter assays, NRF1 binding site identification |
Scientific reports |
Medium |
28993637
|
| 2018 |
LSD1-ERRα-mediated transcriptional activation at target gene TSSs requires NRF1 as an essential promoter-tethering factor for LSD1 recruitment; NRF1 does not affect LSD1 enzymatic activity. All three factors (NRF1, LSD1, ERRα) are required for cell invasion in an MMP1-dependent manner via NRF1/LSD1/ERRα-mediated H3K9me2 demethylation. |
ChIP-seq, siRNA knockdown of each factor, invasion assays, histone modification analysis |
Scientific reports |
Medium |
29968728
|
| 2023 |
NRF1 transcriptionally induces aggrephagy by directly targeting p62/SQSTM1 and GABARAPL1 genes in response to proteasome dysfunction, in addition to its known role inducing proteasome subunit genes. NRF1 is required for p62-positive puncta formation and colocalization with ULK1 and TBK1, and for phosphorylation of p62 at Ser403. |
Genome-wide transcriptome analysis (RNA-seq), ChIP for direct NRF1 binding, NRF1 knockdown, p62 phosphorylation assays, confocal microscopy for puncta formation |
Scientific reports |
High |
37658135
|
| 2021 |
Nrf1 genetic deletion prevented neonatal cardiomyocytes from activating a transcriptional program required for heart regeneration after injury; conversely, Nrf1 overexpression protected the adult heart from ischemia/reperfusion injury. The protective function involves dual activation of the proteasome and redox balance. |
Neonatal heart regeneration model, Nrf1 cardiac-specific deletion, Nrf1 overexpression, I/R injury model, cardiomyocyte toxicity assays |
Nature communications |
High |
34489413
|
| 2000 |
Alpha-Pal/NRF-1 binds the FMR1 promoter and its binding is abolished by DNA methylation; USF1, USF2, and alpha-Pal/NRF-1 are the major transcription factors binding the FMR1 promoter in brain and testis extracts, and NRF-1 binding site integrity is important for transcriptional activity in neuronal cells. |
EMSA/supershift assays with brain and testis extracts, methylation sensitivity assays, mutational analysis of promoter binding sites, reporter gene assays |
The Journal of biological chemistry |
Medium |
11058604
|
| 2019 |
Distinct Nrf1 isoforms (Nrf1α, Nrf1β, Nrf1γ) differentially regulate ARE target genes; Nrf1α and Nrf1β dominantly upregulate >90% of differentially expressed genes while Nrf1γ acts as a dominant-negative inhibitor, counteracting Nrf1α/β activity on target genes including 26S proteasomal subunits. |
Tetracycline-inducible stable expression in Flp-In T-REx system, RNA-sequencing, quantitative RT-PCR validation |
Scientific reports |
Medium |
30814566
|
| 2005 |
Alpha-Pal/NRF-1 induces neurite outgrowth in neuroblastoma cells and primary cortical neurons; a dominant-negative NRF-1 mutant inhibits neurite induction. This function is partly mediated through NRF-1's downstream target gene IAP/CD47. |
Stable and transient expression in IMR-32 cells, dominant-negative mutant, primary cortical neuron transfection, IAP antisense inhibition |
Biochemical and biophysical research communications |
Medium |
15992771
|
| 2019 |
NRF1 and NRF2 have overlapping and distinct transcriptional targets; ChIP-exo sequencing revealed NRF2 prefers AREs flanked by GC-rich regions while NRF1 prefers AT-rich flanking regions, explaining their differential binding in specific cellular contexts. |
ChIP-exo sequencing combined with RNA-seq in U2OS cells, motif analysis |
The Journal of biological chemistry |
High |
31628195
|
| 2019 |
NRF1 binds subtelomeric CpG island promoters and drives TERRA (telomeric repeat-containing RNA) expression when these sites are demethylated; targeted demethylation via CRISPR-dCas9-TET1 increased TERRA production in a NRF1-dependent manner. |
CRISPR-dCas9-TET1 epigenetic engineering for targeted demethylation, NRF1 binding assays, TERRA quantification |
International journal of molecular sciences |
Medium |
31181625
|
| 2024 |
HDAC3 deacetylates NRF1, reducing its nuclear stability and promoting its interaction with p65/NF-κB. Pterostilbene inhibits HDAC3 activity, increasing NRF1 acetylation at K105 and K139, which inhibits NRF1-p65 interaction and reduces neuroinflammation. K105R and K139R Nrf1 mutants counteracted the protective effect. |
Dual-luciferase reporter, co-immunoprecipitation, site-directed mutagenesis (K105R, K139R), MCAO/R mouse model, OGD/R microglial model |
Cellular & molecular biology letters |
Medium |
39198723
|
| 2023 |
NRF1 binds the METTL3 promoter to upregulate METTL3 transcription, which promotes m6A modification and IGF2BP2-dependent mRNA stability of GLRX, protecting against dopamine neuron degeneration in a Parkinson's disease mouse model. |
ChIP, dual luciferase reporter assays, RIP, MeRIP (m6A profiling), NRF1/METTL3 overexpression and KD in MPTP mouse model |
CNS neuroscience & therapeutics |
Medium |
37735974
|
| 2015 |
Nrf1 deficiency in pancreatic β-cells causes impaired glucose-stimulated insulin secretion, elevated basal insulin release, and oxidative stress. Mechanistically, Nrf1 loss alters glucose metabolic enzyme expression (inducing hexokinase 1, suppressing glucokinase) and disrupts coupling of glycolysis to mitochondrial metabolism. |
Stable Nrf1 knockdown in MIN6 cells, β-cell-specific Nrf1 conditional KO mice, insulin secretion assays, glucose metabolism assays, gene expression analysis |
Antioxidants & redox signaling |
High |
25556857
|
| 2010 |
PGC-1β directly interacts with NRF-1 and ERRα; deletion or mutation of NRF-1 and/or ERRα binding sites in target gene (cytochrome c, ATP synthase β, ALAS-1) promoters attenuates their activation by PGC-1β. Inhibition of NRF-1 by siRNA ablates PGC-1β-mediated mitochondrial biogenesis and oxidative phosphorylation. |
siRNA knockdown, promoter deletion/mutagenesis, co-expression studies, mitochondrial function assays |
Mitochondrion |
Medium |
20561910
|
| 2023 |
NRF1 and NRF2 co-regulate genes that eliminate cholesterol and mitigate inflammation and oxidative damage in hepatocytes; combined NRF1/NRF2 deficiency (but not single deficiency) causes severe steatohepatitis, cholesterol overload, and altered bile acid metabolism. Therapeutic effects of NRF2-activating drug bardoxolone require NRF1. |
Hepatocyte-specific single and double KO mice, ChIP-seq for target gene identification, dietary cholesterol challenge, pharmacological bardoxolone treatment |
Cell reports |
High |
37060561
|