Affinage

MVB12B

Multivesicular body subunit 12B · UniProt Q9H7P6

Length
319 aa
Mass
35.6 kDa
Annotated
2026-04-29
17 papers in source corpus 7 papers cited in narrative 7 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

MVB12B is a dedicated subunit of the metazoan ESCRT-I complex, incorporating into the TSG101–VPS37 core through conserved C-terminal elements and contributing to membrane-associated cargo sorting and vesicle biogenesis (PMID:18005716). Its N-terminal MABP domain adopts a β-prism fold with a hydrophobic membrane-anchoring loop and an electropositive patch that binds acidic lipids in a charge-density-dependent manner, enabling autonomous membrane targeting (PMID:22232651). MVB12B is phosphorylated by TBK1 downstream of STING activation, which is essential for sorting bacterial DNA into extracellular vesicles during intracellular infection, linking ESCRT-I to innate immune signaling (PMID:30804548). MVB12B is also required for ESCRT-dependent unconventional secretion of CFTRΔF508 from the ER to the cell surface, and its perturbation impairs HIV-1 budding (PMID:29969945, PMID:18005716).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2007 High

    The identity of the fourth ESCRT-I subunit class in metazoans was unknown; identification of MVB12A/MVB12B as stoichiometric ESCRT-I components established the heterotetrameric architecture and linked these subunits to HIV-1 budding.

    Evidence Reciprocal co-immunoprecipitation, hydrodynamic sedimentation, siRNA knockdown and overexpression with HIV infectivity readouts in human cells

    PMID:18005716

    Open questions at the time
    • Structural basis for MVB12B incorporation into the ESCRT-I core not resolved
    • Functional distinction between MVB12A and MVB12B paralogs unclear
    • Role in endogenous cargo sorting not tested
  2. 2010 Medium

    How MVB12B stability is regulated post-translationally was unknown; EGF-stimulated ubiquitination at Lys264/Lys290, modulated by phosphorylation at Tyr241/Tyr243, was shown to destabilize MVB12B and promote inclusion body formation, establishing an EGFR-linked regulatory circuit.

    Evidence Mass spectrometry PTM mapping, site-directed mutagenesis, EGF stimulation in human cells

    PMID:20654576

    Open questions at the time
    • The E3 ubiquitin ligase responsible was not identified
    • Kinase phosphorylating Tyr241/Tyr243 not determined
    • Physiological consequence of MVB12B destabilization on cargo sorting not measured
  3. 2012 High

    How MVB12B engages membranes was structurally undefined; the 1.3-Å crystal structure of the MABP domain revealed a β-prism fold with a hydrophobic anchoring loop and an electropositive patch, establishing a charge-density-dependent (not stereoselective) lipid-binding mechanism.

    Evidence X-ray crystallography at 1.3 Å, in vitro liposome-binding assays, fluorescence microscopy localization

    PMID:22232651

    Open questions at the time
    • Which specific endosomal phosphoinositide species are preferred in vivo not determined
    • Whether MABP-mediated membrane binding is required for ESCRT-I function in cells not tested
  4. 2013 Medium

    Whether MVB12A/MVB12B and UBAP1 subunits are functionally interchangeable within ESCRT-I was unclear; depletion experiments showed that UBAP1, but not MVB12A/MVB12B, is required for ubiquitin-dependent EGF receptor sorting, revealing functional specialization among ESCRT-I fourth-subunit variants.

    Evidence siRNA knockdown of individual subunits with EGF receptor degradation as cargo-sorting readout

    PMID:24284069

    Open questions at the time
    • The specific cargo class sorted by MVB12B-containing ESCRT-I complexes remained unidentified
    • Whether MVB12A and MVB12B are truly redundant or have distinct cargo selectivities was not resolved
  5. 2018 Medium

    Whether ESCRT-I participates in unconventional ER-to-plasma-membrane secretion was unknown; MVB12B was shown to be required for stress-induced, Golgi-bypassing surface trafficking of CFTRΔF508, with its overexpression partially rescuing chloride channel function.

    Evidence siRNA screen of ESCRT components, overexpression rescue, cell-surface expression and Cl⁻ channel functional assays

    PMID:29969945

    Open questions at the time
    • Mechanism by which MVB12B recognizes CFTRΔF508 as cargo not defined
    • Whether this pathway operates for wild-type CFTR or other misfolded clients not tested
  6. 2019 High

    How innate immune signaling intersects with ESCRT-mediated vesicle biogenesis was undefined; TBK1-dependent phosphorylation of MVB12B was shown to be essential for packaging bacterial DNA into extracellular vesicles, which activate cGAS-STING in bystander cells and suppress T-cell proliferation.

    Evidence Phosphoproteomics, siRNA knockdown, EV isolation, bystander cGAS-STING activation, T-cell proliferation assays across three bacterial pathogens

    PMID:30804548

    Open questions at the time
    • Specific phosphorylation site(s) on MVB12B required for this function not mapped
    • Whether MVB12B directly binds DNA cargo or acts indirectly through adaptor proteins unknown
    • Relevance to viral DNA sorting into EVs not tested
  7. 2025 Medium

    Whether MVB12B has tumor-suppressive activity was unexplored; overexpression in bladder cancer cell lines suppressed proliferation and migration, suggesting a growth-inhibitory role linked to ESCRT function.

    Evidence Overexpression in T24 and UM-UC-3 bladder cancer lines, proliferation and migration assays, GSEA pathway analysis

    PMID:41510117

    Open questions at the time
    • Mechanism by which MVB12B suppresses proliferation not elucidated
    • No in vivo tumor model used
    • Loss-of-function genetic evidence (knockout, mutations in tumors) not provided

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key unresolved questions include: which specific cargo molecules are selectively sorted by MVB12B-containing versus MVB12A-containing ESCRT-I complexes; the identity of the TBK1 phosphorylation site(s) on MVB12B; whether the MABP domain is required for ESCRT-I function in vivo; and how EGF-regulated ubiquitination feeds back onto MVB12B's sorting activities.
  • No cargo-selectivity model distinguishing MVB12B- from MVB12A-containing ESCRT-I
  • No reconstitution of TBK1–MVB12B–DNA sorting in a minimal system
  • No structural model of full-length MVB12B within the ESCRT-I heterotetramer

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008289 lipid binding 1
Localization
GO:0005768 endosome 2 GO:0031410 cytoplasmic vesicle 2 GO:0005886 plasma membrane 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 4 R-HSA-168256 Immune System 1
Complex memberships
ESCRT-I

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2007 MVB12A and MVB12B are identified as the fourth class of metazoan ESCRT-I subunits, associating with the core TSG101-VPS37 binary complex through conserved C-terminal sequence elements; hydrodynamic studies show soluble human ESCRT-I contains one copy of each of the four subunit types. Depletion or overexpression of MVB12 subunits inhibits HIV-1 infectivity and induces aberrant virion morphologies and altered viral Gag protein processing. Co-immunoprecipitation, hydrodynamic sedimentation, siRNA knockdown, HIV budding infectivity assays Cell host & microbe High 18005716
2012 The MVB12B MABP (MVB12-associated β-prism) domain has a β-prism fold with a hydrophobic membrane-anchoring loop and an electropositive phosphoinositide-binding patch that binds in vitro to liposomes containing acidic lipids in a charge-density-dependent (but not stereoselective) manner; the MABP domain autonomously localizes to subcellular puncta and the plasma membrane. 1.3-Å crystal structure, in vitro liposome-binding assay, subcellular localization by fluorescence microscopy Proceedings of the National Academy of Sciences of the United States of America High 22232651
2010 MVB12B is ubiquitinated at Lys264 and Lys290, leading to its instability and inclusion body formation; these ubiquitinations are induced by EGF stimulation and regulated by phosphorylation of Tyr241 and Tyr243 of MVB12B. MVB12A also participates in the aggregation of MVB12B, suggesting cross-regulation of the two paralogs within ESCRT-I. Mass spectrometry-based PTM identification, site-directed mutagenesis, co-immunoprecipitation, EGF stimulation assays Biochemical and biophysical research communications Medium 20654576
2013 MVB12A and MVB12B (but not UBAP1) are selectively incorporated into ESCRT-I complexes; siRNA-mediated depletion of UBAP1, but not MVB12A/MVB12B, disrupts ubiquitin-dependent cargo sorting at the multivesicular body, demonstrating functional specialization among MVB12 family members in endosomal sorting. siRNA knockdown, co-immunoprecipitation, cargo sorting assays (EGF receptor degradation) Journal of cell science Medium 24284069
2019 MVB12B is a substrate of TANK-binding kinase 1 (TBK1): TBK1-mediated phosphorylation of MVB12B is essential for sorting of bacterial DNA into extracellular vesicles (EVs) in Listeria monocytogenes-infected cells; EVs carrying bacterial DNA are delivered to bystander cells to activate the cGAS-STING pathway and inhibit T-cell proliferation. Phosphoproteomics/MS identification of TBK1 substrate, siRNA knockdown, EV isolation, bystander-cell stimulation assays, T-cell proliferation assays Nature microbiology High 30804548
2018 MVB12B is required for unconventional secretion of CFTRΔF508: siRNA knockdown of MVB12B inhibits stress-induced cell-surface trafficking of CFTRΔF508 from the ER via the MVB/ESCRT pathway, bypassing the Golgi; MVB12B overexpression partially rescues CFTRΔF508 cell-surface expression and Cl− channel function. siRNA screen of ESCRT components, overexpression rescue, cell-surface expression assay, Cl− channel functional assay Autophagy Medium 29969945
2025 MVB12B overexpression suppresses BLCA (bladder urothelial carcinoma) cell proliferation and migration in vitro; PPI network analysis links MVB12B to ESCRT components, and GSEA implicates keratinization and intermediate filament organization pathways. Overexpression functional assays (proliferation, migration) in T24 and UM-UC-3 cell lines, immunohistochemistry, qRT-PCR, GSEA Translational cancer research Medium 41510117

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Intracellular bacteria engage a STING-TBK1-MVB12b pathway to enable paracrine cGAS-STING signalling. Nature microbiology 107 30804548
2007 Identification of human MVB12 proteins as ESCRT-I subunits that function in HIV budding. Cell host & microbe 98 18005716
2018 Specific autophagy and ESCRT components participate in the unconventional secretion of CFTR. Autophagy 54 29969945
2012 Structural basis for membrane targeting by the MVB12-associated β-prism domain of the human ESCRT-I MVB12 subunit. Proceedings of the National Academy of Sciences of the United States of America 43 22232651
2014 A genome-wide association study of intra-ocular pressure suggests a novel association in the gene FAM125B in the TwinsUK cohort. Human molecular genetics 37 24518671
2016 Indexing Effects of Copy Number Variation on Genes Involved in Developmental Delay. Scientific reports 31 27363808
2013 The molecular basis for selective assembly of the UBAP1-containing endosome-specific ESCRT-I complex. Journal of cell science 29 24284069
2010 Distinct functions of human MVB12A and MVB12B in the ESCRT-I dependent on their posttranslational modifications. Biochemical and biophysical research communications 25 20654576
2021 Transcriptome-wide Mendelian randomization study prioritising novel tissue-dependent genes for glioma susceptibility. Scientific reports 11 33504897
2014 Protective effect of ischaemic preconditioning in total knee arthroplasty. European review for medical and pharmacological sciences 9 24899618
2024 Genetic Factors Associated with the Development of Neuropathy in Type 2 Diabetes. International journal of molecular sciences 5 38339094
2023 Cell-Free Genic Extrachromosomal Circular DNA Profiles of DNase Knockouts Associated with Systemic Lupus Erythematosus and Relation with Common Fragile Sites. Biomedicines 4 38255187
2020 Novel genetic variants of PIP5K1C and MVB12B of the endosome-related pathway predict cutaneous melanoma-specific survival. American journal of cancer research 4 33163277
2025 Transcriptome analysis of 3D4/21 cells expressing CSFV NS4B. Frontiers in microbiology 0 39967738
2025 Leveraging molecular-QTL co-association to predict novel disease-associated genetic loci using a graph convolutional neural network. PloS one 0 40493586
2025 Identification of Biomarkers for Right Ventricular Dysfunction in Idiopathic Dilated Cardiomyopathy Via Urinary Proteomics and Machine Learning. Journal of the American Heart Association 0 41404738
2025 Multivesicular body subunit 12B (MVB12B) overexpression represses proliferation and migration in bladder urothelial carcinoma. Translational cancer research 0 41510117