| 2010 |
MPP8 chromodomain directly binds methylated H3K9 (H3K9me2/me3) in vivo and in vitro, and MPP8 targets the E-cadherin gene promoter to repress it; knockdown reduces DNMT3A localization at the E-cadherin CpG island, decreasing DNA methylation there. MPP8 also physically interacts with H3K9 methyltransferases GLP and ESET, as well as DNMT3A. |
Chromodomain binding assays (in vitro and in vivo), ChIP, Co-immunoprecipitation, knockdown with reporter/methylation readout |
The EMBO journal |
High |
20871592
|
| 2011 |
G9a and GLP dimethylate Dnmt3a at K44 (mouse; equivalent to K47 human DNMT3A); the MPP8 chromodomain specifically recognizes this dimethylated Dnmt3a-K44me2. MPP8 also interacts with self-methylated GLP in a methylation-dependent manner. The MPP8 chromodomain forms a homodimer in solution and in crystals, suggesting a dimeric MPP8 bridges methylated Dnmt3a and GLP to form a Dnmt3a–MPP8–GLP/G9a silencing complex. |
In vitro methylation assay, crystal structure of MPP8 chromodomain dimer, Co-IP, peptide binding assays |
Nature communications |
High |
22086334
|
| 2011 |
Crystal structure of human MPP8 chromodomain in complex with H3K9me3 peptide (residues 1–15) reveals a conserved aromatic cage (Phe59, Trp80, Tyr83) plus Asp87 that encloses the trimethyl-lysine, enabling discrimination of H3K9 from H3K27. The chromodomain forms a homodimer via domain-swapping of two β-strands. Modeled phosphorylation of cage residue Tyr83 is predicted to modulate methyl-lysine binding. |
X-ray crystallography, solution studies (dimerization), peptide binding affinity measurement |
PloS one |
High |
22022377
|
| 2011 |
Crystal structure of MPP8 chromodomain–H3K9me3 peptide complex defines contacts with at least six H3 residues (Q5–S10); three aromatic residues (Phe59, Trp80, Tyr83) form a partial hydrophobic cage. MPP8 harbors an N-terminal chromodomain and C-terminal ankyrin repeat domain. Binding affinities for H3K9me3 and H3K9me2 are sub-micromolar. |
X-ray crystallography, fluorescence polarization binding assay |
Journal of molecular biology |
High |
21419134
|
| 2013 |
MPP8 is phosphorylated by cyclin B1–Cdk1 in vitro and in cells during mitosis; this phosphorylation causes MPP8 to dissociate from chromatin during metaphase-to-anaphase. An MPP8 STA mutant (all Cdk consensus sites substituted to Ala) fails to dissociate from chromatin during early mitosis, demonstrating that Cdk-dependent phosphorylation regulates MPP8 chromatin association. |
In vitro kinase assay (cyclin B1-Cdk1 + MPP8), site-directed mutagenesis (STA mutant), mitotic kinase inhibitor experiments, chromatin fractionation |
Biochemical and biophysical research communications |
High |
23416073
|
| 2013 |
The mitochondrial peptide Humanin (HN) physically interacts with MPP8; co-immunoprecipitation confirmed the interaction. The MPP8-binding site on HN maps to residues 5–12, and the HN-binding domain on MPP8 maps to residues 431–560. |
Co-immunoprecipitation, peptide mapping, deletion analysis |
Journal of peptide science |
Medium |
23532874
|
| 2015 |
MPP8 physically interacts with SIRT1 deacetylase. SIRT1 antagonizes PCAF-catalyzed acetylation of MPP8 at K439, protecting MPP8 from ubiquitin-proteasome degradation. Conversely, MPP8 recruits SIRT1 to target promoters for H4K16 deacetylation after MPP8 binds methyl-H3K9. Disrupting either MPP8 methyl-H3K9 binding or the SIRT1 interaction de-represses E-cadherin and reduces EMT phenotypes. |
Co-IP, site-directed mutagenesis (K439 acetylation site), ubiquitin-proteasome assay, ChIP, knockdown with EMT phenotype readout |
EMBO reports |
High |
25870236
|
| 2015 |
MPP8 physically interacts with PRC1 complex components in co-immunoprecipitation experiments. MPP8 knockdown in HeLa cells de-represses testis-specific genes, and depletion in murine ES cells induces mesoderm differentiation genes (Cdx2, Brachyury). |
Co-immunoprecipitation, shRNA knockdown with gene expression readout |
Biochemical and biophysical research communications |
Medium |
25660450
|
| 2018 |
G9a/GLP tri-methylates ATF7IP at an H3K9-like mimic motif in mouse embryonic stem cells; MPP8 recognizes this methylated ATF7IP via its chromodomain. SETDB1/MPP8-mediated reporter-provirus silencing is delayed in mESCs expressing an unmethylatable ATF7IP mutant, implicating ATF7IP methylation in SETDB1/MPP8-mediated transgene silencing. |
Comprehensive substrate screen (MS-based), in vitro methylation assay, chromodomain binding assay, unmethylatable mutant cell line, reporter-provirus silencing assay |
Epigenetics & chromatin |
High |
30286792
|
| 2019 |
MPP8 physically interacts with SETDB1 in embryonic stem cells and co-regulates a significant number of common genomic targets, especially satellite DNA repeats, as shown by combined biochemical, transcriptomic, and genomic (ChIP/CUT&RUN) analyses. |
Co-immunoprecipitation, RNA-seq, ChIP-seq/genomic profiling |
Genes |
Medium |
31557926
|
| 2021 |
MPP8 is essential for ground-state pluripotency in mESCs; its depletion causes cell cycle arrest and spontaneous differentiation. SETDB1 recruits MPP8 to its genomic target loci. Unexpectedly, MPP8 lacking the chromodomain still efficiently represses LINE-1 elements, while the unannotated C-terminus is essential for function. MPP8 represses LINE1 elements through its association with the HUSH core complex, independently of detectable chromatin binding and maintenance of H3K9me3 levels. |
Auxin-inducible degron depletion, domain deletion mutants, ChIP-seq, RNA-seq, rescue experiments |
Nature communications |
High |
34031396
|
| 2021 |
A peptidomimetic ligand (UNC5246) targeting the MPP8 chromodomain was developed; biotinylated UNC5246 in chemoproteomics studies revealed HRP2 (hepatoma-derived growth factor-related protein 2) as a novel MPP8-associated protein. HRP2 was shown to colocalize with MPP8 at the E-cadherin gene locus. |
One-bead one-compound (OBOC) combinatorial screening, chemoproteomics pulldown, ChIP colocalization |
ACS chemical biology |
Medium |
34415726
|
| 2023 |
MPP8 regulates the LIF/STAT3 signaling pathway activity and Nanog expression in mESCs. Induced degradation of MPP8 protein impairs mESC proliferation, colony formation, LIF/STAT3 pathway activity, and differentiation capacity. |
miniIAA7-tagged degron cell lines, auxin-induced degradation, reporter assays for STAT3 activity, colony formation assay |
Cells |
Medium |
37626833
|
| 2024 |
Crystal structure of the MPP8 C-terminal domain (CTD) reveals five ankyrin repeats followed by a PINIT-domain-like fold. AlphaFold3 modeling predicts the MPP8 CTD interacts with SPOC and novel-fold domains in TASOR; point mutations at these predicted interfaces abolish HUSH-dependent transcriptional repression in a cell-based reporter assay. The MPP8 chromodomain binds sequences in SETDB1, ATF7IP, G9a, and GLP with similar or higher affinity than H3K9me3, suggesting MPP8 recruits H3K9 methyltransferases via its chromodomain. |
X-ray crystallography (MPP8 CTD), AlphaFold3 structural modeling, site-directed mutagenesis at predicted interfaces, cell-based HUSH reporter assay, binding affinity measurements |
Journal of molecular biology |
High |
39638237
|
| 2026 |
Covalent fragment screening identified two acrylamide-containing fragments that covalently label MPP8 at cysteine 99 (C99), which is adjacent to the methyl-lysine binding pocket of the chromodomain, providing a site for potential covalent antagonist development. |
MALDI-TOF mass spectrometry covalent fragment screening, glutathione reactivity assay for selectivity |
SLAS discovery |
Medium |
41621721
|
| 2024 |
PRC1.6 complex colocalizes with the HUSH complex at active promoters genome-wide; PRC1.6 binding at a subset of HUSH-silenced genes is dependent on the core HUSH component MPP8, as shown by genome-wide chromatin profiling and loss-of-function experiments. |
Proximity labeling (C-BERST), forward genetic screen, ChIP-seq/genome-wide profiling, MPP8 loss-of-function |
bioRxivpreprint |
Medium |
|
| 2025 |
In human iPSCs, MPP8 depletion (as a core HUSH component) induces expression of young LINE-1 elements and interferon-stimulated genes (ISGs) directly, without IFN signaling, suggesting MPP8 directly represses ISGs as transcriptional targets at the chromatin level. CUT&Tag confirmed MPP8 enrichment at HUSH-regulated ISGs. |
MPP8 depletion in iPSCs, RNA-seq, CUT&Tag chromatin profiling |
bioRxivpreprint |
Medium |
|
| 2025 |
MPP8 is targeted for proteasomal degradation by the adenoviral E3 ubiquitin ligase complex (E1B-55K and E4orf6) during HAdV infection, identifying MPP8 as a host restriction factor for adenovirus that the virus actively counteracts. |
Protein degradation assays, co-immunoprecipitation with viral proteins, proteasome inhibitor rescue |
bioRxivpreprint |
Low |
|