Affinage

LAGE3

EKC/KEOPS complex subunit LAGE3 · UniProt Q14657

Length
143 aa
Mass
14.8 kDa
Annotated
2026-06-10
8 papers in source corpus 4 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

LAGE3 is a component of the EKC/KEOPS complex implicated in threonylcarbamoylation of adenosine at position 37 in tRNAs, and it functions as a pro-tumorigenic factor across multiple cancer contexts (PMID:38653358). In hepatocellular carcinoma, LAGE3 is required for VEGFA mRNA stability, and its elevated expression increases VEGFA secretion and angiogenesis (PMID:38653358); it further drives proliferation, migration, invasion, and apoptosis resistance through activation of the JNK and ERK signaling pathways, as pharmacological ERK or JNK inhibition reverses LAGE3-induced malignant phenotypes (PMID:34837962). In non-small cell lung cancer, LAGE3 promotes metastasis and stemness via AKT/PI3K signaling, with its knockdown suppressing the stemness factors Nanog, SOX2, and OCT4 and reducing tumor growth in vivo (PMID:37473499). LAGE3 also physically interacts with the orf virus immunomodulatory protein ORFV024 (PMID:29605601). Beyond these signaling and interaction findings, the biochemical mechanism by which LAGE3 stabilizes VEGFA mRNA or engages upstream kinase activation has not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2018 Medium

    Establishing a physical binding partner for LAGE3 provided the first direct interaction-level evidence for the protein, linking it to viral immunomodulation.

    Evidence Yeast two-hybrid screen, His-tag pull-down, and co-immunoprecipitation with confocal microscopy identifying orf virus ORFV024 as a binding partner

    PMID:29605601

    Open questions at the time
    • Functional consequence of the LAGE3-ORFV024 interaction for host immunity is undefined
    • No mapping of the interaction interface or binding domain
    • Relevance to endogenous LAGE3 cellular function unclear
  2. 2021 Medium

    Placed LAGE3 within defined kinase cascades by showing it activates JNK and ERK to drive HCC malignant phenotypes, moving from correlation toward mechanism.

    Evidence siRNA knockdown and overexpression in Hep3B and SK-HEP1 cells, xenograft model, phospho-JNK/ERK western blots, and inhibitor (SCH772984, SP600125) rescue

    PMID:34837962

    Open questions at the time
    • How LAGE3 connects to upstream JNK/ERK activation is unknown
    • No structural or biochemical basis for pathway engagement
    • Single lab, no orthogonal genetic rescue
  3. 2023 Medium

    Extended LAGE3's oncogenic role beyond liver cancer to NSCLC and to a distinct pathway, implicating AKT/PI3K in metastasis and stemness control.

    Evidence siRNA knockdown in A549 and H1975 cells, xenograft nude mouse model, western blotting of AKT/PI3K components and stemness markers Nanog/SOX2/OCT4

    PMID:37473499

    Open questions at the time
    • No rescue or mutagenesis to confirm causality
    • Mechanistic link between LAGE3 and AKT/PI3K activation unresolved
    • Whether different pathways in HCC vs NSCLC reflect tissue context is untested
  4. 2024 Medium

    Connected LAGE3's EKC/KEOPS complex membership to a specific molecular output by showing it is required for VEGFA mRNA stability and angiogenesis.

    Evidence Knockdown/overexpression in HCC cell lines with western blot and mRNA stability assays

    PMID:38653358

    Open questions at the time
    • Direct biochemical mechanism linking LAGE3 or tRNA modification to VEGFA mRNA stability not defined
    • No orthogonal method or rescue reported
    • Whether tRNA threonylcarbamoylation activity underlies the mRNA effect is untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How LAGE3's role in the EKC/KEOPS tRNA-modification complex mechanistically gives rise to its diverse oncogenic signaling and mRNA-stabilizing activities remains unresolved.
  • No structural model of LAGE3 within the EKC/KEOPS complex from the corpus
  • No demonstration that catalytic tRNA modification activity is required for the cancer phenotypes
  • Unifying mechanism across angiogenesis, JNK/ERK, and AKT/PI3K pathways not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003723 RNA binding 1
Partners
Complex memberships
EKC/KEOPS complex

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 LAGE3, as a component of the EKC/KEOPS complex (involved in threonylcarbamoylation of adenosine at position 37 in tRNAs), is required for VEGFA mRNA stability; increased LAGE3 expression leads to upregulated VEGFA secretion and angiogenesis in hepatocellular carcinoma cells. Knockdown/overexpression experiments in HCC cell lines with western blot and mRNA stability assays Biochimica et biophysica acta. Molecular basis of disease Medium 38653358
2021 LAGE3 promotes proliferation, migration, and invasion of hepatocellular carcinoma cells and inhibits apoptosis by activating the JNK and ERK signaling pathways; pharmacological inhibition of ERK (SCH772984) or JNK (SP600125) reversed LAGE3 overexpression-induced malignant phenotypes. siRNA knockdown and overexpression in HCC cell lines (Hep3B, SK-HEP1), xenograft mouse model, western blot for p-JNK/JNK and p-ERK/ERK, pharmacological inhibitor rescue experiments Cellular & molecular biology letters Medium 34837962
2023 LAGE3 promotes cell metastasis and stemness in non-small cell lung cancer by activating the AKT/PI3K signaling pathway; LAGE3 knockdown suppressed stemness-related proteins (Nanog, SOX2, OCT4) and reduced tumor growth in vivo. siRNA knockdown in NSCLC cell lines (A549, H1975), xenograft nude mouse model, western blotting for AKT/PI3K pathway components and stemness proteins Pathology, research and practice Medium 37473499
2018 LAGE3 physically interacts with orf virus protein ORFV024; this interaction was confirmed by yeast two-hybrid screening, His-tag pull-down assay, and co-immunoprecipitation. Yeast two-hybrid, His-tag pull-down assay, co-immunoprecipitation, confocal microscopy Gene Medium 29605601

Source papers

Stage 0 corpus · 8 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2021 LAGE3 promoted cell proliferation, migration, and invasion and inhibited cell apoptosis of hepatocellular carcinoma by facilitating the JNK and ERK signaling pathway. Cellular & molecular biology letters 24 34837962
2020 LAGE3 correlates with tumorigenic immune infiltrates in the clear cell renal cell carcinoma microenvironment. International immunopharmacology 14 32683301
2018 Identification of host cellular proteins LAGE3 and IGFBP6 that interact with orf virus protein ORFV024. Gene 9 29605601
2023 Diagnosis delay a family of Galloway-Mowat Syndrome caused by a classical splicing mutation of Lage3. BMC nephrology 7 36755238
2023 Novel LAGE3 Pathogenic Variants Combined with TRPC6 and NUP160 Variants in Galloway-Mowat Syndrome: A Case Report. Case reports in nephrology and dialysis 2 37900929
2024 LAGE3 promotes angiogenesis on hepatocellular carcinoma by stabilizing VEGFA mRNA. Biochimica et biophysica acta. Molecular basis of disease 1 38653358
2023 LAGE3 promotes cell metastasis and stemness in non-small cell lung cancer companied with AKT/PI3K signaling pathway activation. Pathology, research and practice 1 37473499
2025 Two brothers presented with rare clinical characteristics with a novel LAGE3 variant: a case report and literature review. BMC pediatrics 0 40490705

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