Affinage

KIR3DL2

Killer cell immunoglobulin-like receptor 3DL2 · UniProt P43630

Length
455 aa
Mass
50.2 kDa
Annotated
2026-06-10
41 papers in source corpus 12 papers cited in narrative 12 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/5 claims corpus-supported (80%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

KIR3DL2 is a three-domain killer immunoglobulin-like receptor expressed on NK cells and T-cell subsets that operates as a ligand-discriminating cell-surface receptor coupling recognition of HLA class I and CpG-DNA to control of effector cytokine output and lymphocyte survival (PMID:15162437, PMID:20147700, PMID:23440420). It binds HLA-A3 and HLA-A11 in a peptide-dependent manner, with peptide residue 8 critical for recognition (PMID:15162437), but engages β2m-free HLA-B27 free heavy chains and disulfide-bonded B27 homodimers more strongly and in a peptide-sequence-independent fashion, contacts mediated preferentially by the D0 domain together with complementary D1/D2 interactions across both heavy chains (PMID:23440420, PMID:25582852). B27 free heavy-chain engagement drives greater receptor phosphorylation and signaling than HLA-A3 and promotes survival of KIR3DL2+ NK and CD4 T cells, whereas heterotrimeric class I ligation inhibits IFN-γ production (PMID:17407096, PMID:23440420). Through its D0 domain KIR3DL2 also binds CpG oligodeoxynucleotides, co-internalizing and shuttling them to early endosomes for TLR9 engagement, and discriminates self-DNA from pathogen DNA in a sequence-specific manner to set IFN-γ and cytotoxic responses (PMID:20147700, PMID:34760351). These activities link the receptor to disease: stronger KIR3DL2–B27 free heavy-chain interaction expands IL-23R-bearing, IL-17-producing Th17 cells in spondyloarthritis (PMID:21248258, PMID:23804219), and on malignant Sézary T cells CpG engagement triggers caspase-dependent apoptosis coupled to STAT3 dephosphorylation (PMID:25007046), making KIR3DL2 an actionable target for antibody-mediated killing of cutaneous T-cell lymphoma (PMID:25361998).

Mechanistic history

Synthesis pass · year-by-year structured walk · 12 steps
  1. 2003 Medium

    Established that KIR3DL2 engagement does not necessarily deliver inhibitory signals in all T-cell contexts, complicating the simple inhibitory-receptor model.

    Evidence antibody crosslinking on tumor-infiltrating CD8+ CTL clones with cytotoxicity and IFN-γ readouts

    PMID:14562047

    Open questions at the time
    • Negative finding in one CTL context only
    • Did not identify physiological ligand driving signaling
    • No biochemical signaling characterized
  2. 2004 High

    Defined the first physiological HLA ligands of KIR3DL2 and the peptide-dependence of recognition, answering what classical class I molecules the receptor reads.

    Evidence HLA tetramer staining of KIR3DL2 transfectants with peptide analogue substitution

    PMID:15162437

    Open questions at the time
    • Functional consequence of A3/A11 binding not established here
    • Affinity relative to other ligands unknown
    • No structural interface defined
  3. 2005 Medium

    Showed that KIR3DL2–B27 homodimer interaction promotes NK cell survival in spondyloarthritis, linking the receptor to a disease-relevant ligand.

    Evidence co-culture of patient NK cells with B27₂-expressing cell line; apoptosis and activation-marker assays

    PMID:16255049

    Open questions at the time
    • Did not resolve signaling mechanism of survival
    • Single patient-cell context
    • Causal role in disease not proven
  4. 2007 High

    Demonstrated that β2m-free HLA-B27 heavy-chain homodimers are peptide-sequence-independent ligands of KIR3DL2 that inhibit IFN-γ, distinguishing this binding mode from peptide-dependent heterotrimer recognition.

    Evidence KIR transfectant binding with loaded vs unloaded B27 tetramers; NK IFN-γ functional assays

    PMID:17407096

    Open questions at the time
    • Domain basis of dimer binding not mapped
    • Did not quantify ligand hierarchy
    • Signaling downstream of inhibition uncharacterized
  5. 2010 High

    Revealed a non-HLA ligand class, showing KIR3DL2 binds CpG ODN via its D0 domain and delivers it to endosomal TLR9, defining a receptor role in innate DNA sensing.

    Evidence soluble receptor binding, D0 domain-deletion mutagenesis, confocal co-localization, IFN-γ assays

    PMID:20147700

    Open questions at the time
    • Sequence selectivity of CpG binding not defined here
    • Physiological source of CpG ligand unaddressed
    • Relationship to HLA-binding function unclear
  6. 2011 Medium

    Connected the KIR3DL2–B27 dimer axis to Th17 biology, showing it drives IL-17 production and IL-23R expression in CD4 T cells relevant to spondyloarthritis.

    Evidence co-culture of KIR3DL2+ CD4 T cells with B27₂-APCs; intracellular cytokine staining

    PMID:21248258

    Open questions at the time
    • Signaling pathway linking receptor to IL-17 not resolved
    • In vitro system only
    • Causal contribution to clinical disease not established
  7. 2013 High

    Quantified the ligand hierarchy and signaling consequences, establishing that B27 free heavy chain binds more strongly than HLA-A3 and drives greater phosphorylation, IL-2 output, and lymphocyte survival.

    Evidence tetramer binding, KIR3DL2-Fc pulldown, KIR3DL2-CD3ε reporter assays, phosphorylation and survival assays

    PMID:23440420

    Open questions at the time
    • Endogenous signaling adaptors not identified
    • Structural interface predicted not solved
    • Link between phosphorylation and survival mechanistically incomplete
  8. 2013 Medium

    Provided a molecular basis for differential disease association by linking allele-specific B27 dimer/FHC formation to differential KIR3DL2 stimulation.

    Evidence comparison of HLA-B*27:05 vs B*27:09 dimer formation, reporter and NK survival assays

    PMID:23804219

    Open questions at the time
    • Direct genetic disease causation not tested
    • Mechanism of differential dimer formation not the focus
    • Single in vitro system
  9. 2014 Medium

    Mapped the apoptotic consequence of CpG engagement in malignant cells, showing KIR3DL2 ligation triggers caspase-dependent death and STAT3 dephosphorylation in Sézary cells.

    Evidence internalization assays, caspase-inhibitor rescue, STAT3 phosphorylation western blot, apoptosis assays

    PMID:25007046

    Open questions at the time
    • Signaling link between receptor and STAT3 not defined
    • Restricted to Sézary cell context
    • Endogenous CpG trigger in vivo unknown
  10. 2014 Medium

    Validated KIR3DL2 as a therapeutic target, demonstrating that an anti-KIR3DL2 antibody mediates ADCC/phagocytosis and tumor control in CTCL models.

    Evidence in vitro ADCC/phagocytosis with primary Sézary cells; mouse xenograft model

    PMID:25361998

    Open questions at the time
    • Single antibody/agent tested
    • Mechanism of selective tumor expression not addressed
    • Clinical efficacy not established here
  11. 2015 Medium

    Resolved the structural basis of preferential B27 dimer binding, identifying D0 as central and defining complementary D0/D1 contacts across both heavy chains.

    Evidence site-directed mutagenesis of receptor domains, functional binding assays, computational interface modeling

    PMID:25582852

    Open questions at the time
    • Model not validated by experimental structure
    • Contact residues inferred from modeling
    • Single lab
  12. 2021 Medium

    Established sequence-specific self/non-self DNA discrimination, showing genome-common CpG drives inhibition while parasite-prevalent CpG drives activation.

    Evidence CpG-DNA uptake, IFN-γ and cytotoxicity assays with defined sequences, genomic bioinformatic survey

    PMID:34760351

    Open questions at the time
    • Molecular basis of sequence discrimination not solved
    • NKL cell line model only
    • In vivo relevance to anti-parasite immunity untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How KIR3DL2 integrates opposing inhibitory versus activating outcomes across its HLA and CpG ligands at the level of cytoplasmic signaling adaptors remains unresolved.
  • No experimental structure of any ligand complex
  • Cytoplasmic signaling adaptors and ITIM/ITAM usage not directly characterized in corpus
  • Mechanism switching between inhibition and activation undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0001618 virus receptor activity 3 GO:0003677 DNA binding 2 GO:0060089 molecular transducer activity 2
Localization
GO:0005886 plasma membrane 3 GO:0005768 endosome 1
Pathway
R-HSA-168256 Immune System 3

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 KIR3DL2*001 directly and specifically binds HLA-A3 and HLA-A11 in a peptide-dependent manner; single amino acid substitutions in the nonamer peptide revealed a critical role for residue 8 in KIR3DL2 recognition, demonstrated by HLA tetramer binding to KIR3DL2 transfectants. HLA tetramer staining of KIR3DL2 transfectants; peptide analogue substitution assays European journal of immunology High 15162437
2007 HLA-B27 heavy-chain homodimers (B27₂, β2m-free) bind KIR3DL2 (and KIR3DL1) independently of the sequence of the bound peptide, in contrast to HLA-B27 heterotrimers whose KIR3DL1 binding is peptide-dependent; KIR3DL2 ligation by B27₂ inhibits NK and T cell IFN-γ production. KIR transfectant binding assays with peptide-loaded vs. unloaded B27 tetramers; NK cell IFN-γ functional assays European journal of immunology High 17407096
2010 KIR3DL2 directly binds CpG oligodeoxynucleotides (ODNs) via its D0 domain, co-internalizes with CpG ODN upon NK cell stimulation, and shuttles CpG ODN to early endosomes where it encounters TLR9, thereby mediating CpG-induced IFN-γ release predominantly in KIR3DL2+ NK cells. Soluble KIR3DL2 binding assays with ODNs; flow cytometry surface down-modulation; confocal microscopy co-localization; domain-deletion mutagenesis (D0 domain); functional IFN-γ assays in KIR3DL2+ vs KIR3DL2− NK cells Blood High 20147700
2011 B27₂-expressing APCs stimulate the survival, proliferation, and IL-17 production of KIR3DL2+ CD4 T cells; KIR3DL2+ CD4 T cells account for the majority of IL-23R expression and produce more IL-17 in the presence of IL-23, linking HLA-B27 homodimer/KIR3DL2 interaction to Th17 expansion in spondyloarthritis. Co-culture of KIR3DL2+ CD4 T cells with B27₂-expressing APCs; intracellular cytokine staining; flow cytometry; KIR3DL2+ T cell line stimulation assays Journal of immunology Medium 21248258
2013 KIR3DL2 binds HLA-B27 free heavy chain (FHC) dimers more strongly than other HLA class I (including HLA-A3); B27 FHC binding induces greater KIR3DL2 phosphorylation and greater IL-2 production in KIR3DL2-CD3ε reporter T cells than HLA-A3; B27 FHC binding promotes greater survival of KIR3DL2+ CD4 T and NK cells. HLA tetramer binding to KIR3DL2-transfected cells; KIR3DL2-Fc pull-down of FHC from cell lines; KIR3DL2-CD3ε reporter T cell assays; phosphorylation assays; NK/T cell survival assays Journal of immunology High 23440420
2013 HLA-B*27:05 forms more cell surface B27 dimers and free heavy chain than HLA-B*27:09; cells expressing HLA-B*27:05 stimulate KIR3DL2-CD3ε reporter T cells more effectively and promote KIR3DL2+ NK cell survival more strongly than HLA-B*27:09, providing a mechanistic basis for differential AS association. In vitro B27 FHC/dimer formation assays; FACS staining with class I tetramers; KIR3DL2-CD3ε reporter T cell assays; NK cell survival assays Rheumatology (Oxford, England) Medium 23804219
2014 Engagement of KIR3DL2 by CpG ODN on malignant Sézary T cells induces receptor internalization and caspase-dependent apoptosis, correlated with dephosphorylation of constitutively activated STAT3. KIR3DL2 internalization assays; caspase inhibitor (Z-DEVD) rescue experiments; STAT3 phosphorylation western blot; flow cytometry apoptosis assays The Journal of investigative dermatology Medium 25007046
2015 The D0 Ig-like domain of KIR3DL2 plays a central role in the stronger binding to B27 FHC dimers; mutagenesis identified key contact residues in D0, D1, and D2 domains, with modeling predicting that non-symmetrical complementary contacts of D0 and D1 with the α1, α2, and α3 domains of both B27 H chains underlie preferential binding. Site-directed mutagenesis of KIR3DL2 domains; functional binding assays on NK and reporter cells; computational modeling of B27 dimer–KIR3DL2 interface Journal of immunology Medium 25582852
2003 KIR3DL2/p140 crosslinking on tumor-infiltrating CD8+ CTL clones did not inhibit (or activate) cytotoxicity or cytokine production triggered by anti-CD3, indicating that KIR3DL2 engagement does not produce inhibitory effects on these CTL in vitro. Antibody crosslinking of KIR3DL2 on CTL clones; 51Cr cytotoxicity assay; IFN-γ secretion assay Oncogene Medium 14562047
2005 KIR3DL2+ NK cells in spondyloarthritis patients display an activated phenotype and are protected from apoptosis by culture with a cell line expressing B27 homodimers (B27₂), demonstrating that KIR3DL2–B27₂ interaction promotes NK cell survival. Annexin V/7-AAD apoptosis assay; 51Cr cytotoxicity assay; co-culture of NK cells with B27₂-expressing cell line; flow cytometry activation marker staining Arthritis and rheumatism Medium 16255049
2021 KIR3DL2 binds CpG-DNA in a sequence-specific manner; CpG-DNA sequences common in the human genome induce inhibitory signaling in KIR3DL2+ NKL cells (reduced IFN-γ, reduced target-cell killing), whereas CpG-DNA sequences prevalent in parasitic worm genomes promote IFN-γ production and cytotoxicity, indicating KIR3DL2 differentiates self-DNA from pathogen DNA. CpG-DNA uptake assays in KIR3DL2+ NKL cells; functional IFN-γ and cytotoxicity assays with defined CpG-DNA sequences; genomic bioinformatic survey of CpG flanking sequences PeerJ Medium 34760351
2014 IPH4102, a humanized anti-KIR3DL2 monoclonal antibody, mediates antibody-dependent cell cytotoxicity (ADCC) and phagocytosis of KIR3DL2+ CTCL tumor cells, selectively killing primary Sézary cells ex vivo; in a mouse model of KIR3DL2+ disease, it improved survival and reduced tumor growth. In vitro ADCC and phagocytosis assays with allogeneic PBMC effectors; autologous NK-based killing assays with primary Sézary patient cells; mouse xenograft tumor model Cancer research Medium 25361998

Source papers

Stage 0 corpus · 41 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2004 Recognition of HLA-A3 and HLA-A11 by KIR3DL2 is peptide-specific. European journal of immunology 262 15162437
2011 Th17 cells expressing KIR3DL2+ and responsive to HLA-B27 homodimers are increased in ankylosing spondylitis. Journal of immunology (Baltimore, Md. : 1950) 229 21248258
2009 KIR2DS4 is a product of gene conversion with KIR3DL2 that introduced specificity for HLA-A*11 while diminishing avidity for HLA-C. The Journal of experimental medicine 201 19858347
2005 Expansion and enhanced survival of natural killer cells expressing the killer immunoglobulin-like receptor KIR3DL2 in spondylarthritis. Arthritis and rheumatism 157 16255049
2019 IPH4102, a first-in-class anti-KIR3DL2 monoclonal antibody, in patients with relapsed or refractory cutaneous T-cell lymphoma: an international, first-in-human, open-label, phase 1 trial. The Lancet. Oncology 130 31253572
2004 CD158k/KIR3DL2 is a new phenotypic marker of Sezary cells: relevance for the diagnosis and follow-up of Sezary syndrome. The Journal of investigative dermatology 106 15086570
2007 Interaction of HLA-B27 homodimers with KIR3DL1 and KIR3DL2, unlike HLA-B27 heterotrimers, is independent of the sequence of bound peptide. European journal of immunology 94 17407096
2013 KIR3DL2 binds to HLA-B27 dimers and free H chains more strongly than other HLA class I and promotes the expansion of T cells in ankylosing spondylitis. Journal of immunology (Baltimore, Md. : 1950) 75 23440420
2010 A novel KIR-associated function: evidence that CpG DNA uptake and shuttling to early endosomes is mediated by KIR3DL2. Blood 74 20147700
2011 Caspase-3 contributes to ZO-1 and Cl-5 tight-junction disruption in rapid anoxic neurovascular unit damage. PloS one 73 21364989
2014 IPH4102, a humanized KIR3DL2 antibody with potent activity against cutaneous T-cell lymphoma. Cancer research 58 25361998
2013 The arthritis-associated HLA-B*27:05 allele forms more cell surface B27 dimer and free heavy chain ligands for KIR3DL2 than HLA-B*27:09. Rheumatology (Oxford, England) 54 23804219
2008 CD158k/KIR3DL2 is a useful marker for identifying neoplastic T-cells in Sézary syndrome by flow cytometry. Cytometry. Part B, Clinical cytometry 53 18061949
2017 Usefulness of KIR3DL2 to Diagnose, Follow-Up, and Manage the Treatment of Patients with Sézary Syndrome. Clinical cancer research : an official journal of the American Association for Cancer Research 42 28119365
2007 CD158K/KIR3DL2 transcript detection in lesional skin of patients with erythroderma is a tool for the diagnosis of Sézary syndrome. The Journal of investigative dermatology 35 17703174
2012 CD158k/KIR3DL2 and NKp46 are frequently expressed in transformed mycosis fungoides. Experimental dermatology 32 22621189
2016 KIR3DL2 (CD158k) is a potential therapeutic target in primary cutaneous anaplastic large-cell lymphoma. The British journal of dermatology 27 27037558
2019 Revisiting the initial diagnosis and blood staging of mycosis fungoides and Sézary syndrome with the KIR3DL2 marker. The British journal of dermatology 25 31487384
2012 New perspectives on the ligands and function of the killer cell immunoglobulin-like receptor KIR3DL2 in health and disease. Frontiers in immunology 24 23162554
2017 Therapeutic Antibodies to KIR3DL2 and Other Target Antigens on Cutaneous T-Cell Lymphomas. Frontiers in immunology 19 28912774
2004 Investigation of killer cell immunoglobulin-like receptor gene diversity V. KIR3DL2. Tissue antigens 19 15304002
2015 A novel targeted immunotherapy for CTCL is on its way: Anti-KIR3DL2 mAb IPH4102 is potent and safe in non-clinical studies. Oncoimmunology 17 26405593
2003 Functional and molecular characterization of a KIR3DL2/p140 expressing tumor-specific cytotoxic T lymphocyte clone infiltrating a human lung carcinoma. Oncogene 17 14562047
2018 IPH4102, a monoclonal antibody directed against the immune receptor molecule KIR3DL2, for the treatment of cutaneous T-cell lymphoma. Expert opinion on investigational drugs 14 30001170
2014 KIR3DL2/CpG ODN interaction mediates Sézary syndrome malignant T cell apoptosis. The Journal of investigative dermatology 13 25007046
2009 [Os(IV)Cl(5)(Hazole)](-) complexes: synthesis, structure, spectroscopic properties, and antiproliferative activity. Inorganic chemistry 13 19842663
2006 Influence of interleukin IL-2 and IL-12 + IL-18 on surface expression of immunoglobulin-like receptors KIR2DL1, KIR2DL2, and KIR3DL2 in natural killer cells. Mediators of inflammation 13 17047292
2007 KIR3DL2: diversity in a hematopoietic stem cell transplant population. Tissue antigens 9 17661911
2022 KIR3DL2 contributes to the typing of acute adult T-cell leukemia and is a potential therapeutic target. Blood 8 35687761
2015 The D0 Ig-like domain plays a central role in the stronger binding of KIR3DL2 to B27 free H chain dimers. Journal of immunology (Baltimore, Md. : 1950) 8 25582852
2024 Structural Phase Transition in 0D (3,5-DMP)2Bi1-SbCl5 Metal Halides: Expression of the Lone Pair Effect and Polyhedral Distortion. Inorganic chemistry 7 38588023
2020 Potential antipsychotic action of the selective agonist of adenosine A1 receptors, 5'-Cl-5'-deoxy-ENBA, in amphetamine and MK-801 rat models. Pharmacological reports : PR 7 32219695
2014 Two new cases of KIR3DP1, KIR2DL4-negative genotypes, one of which is also lacking KIR3DL2. Archivum immunologiae et therapiae experimentalis 7 25033772
2021 Abundant CpG-sequences in human genomes inhibit KIR3DL2-expressing NK cells. PeerJ 6 34760351
2014 Primary cutaneous aggressive epidermotropic CD8+ T-cell lymphoma with KIR3DL2 and NKp46 expression in a human immunodeficiency virus carrier. Journal of cutaneous pathology 6 25407699
2021 Fine definition of the epitopes on the human gp91phox/NOX2 for the monoclonal antibodies CL-5 and 48. Journal of immunological methods 4 34971634
2020 Novel genetic variants of KIR3DL2 and PVR involved in immunoregulatory interactions are associated with non-small cell lung cancer survival. American journal of cancer research 4 32642289
2021 KCs2Pb2(HCOO)2Cl5: A Lead Formate with Strong Second-Harmonic-Generation Response Obtained by an Anionic Substitution. Inorganic chemistry 3 34964612
2025 Fluvoxamine may reverse the decrease in filtering capacity that occurs in acute kidney injury by increasing IL-10 and ACE expressions and preserving AQ-2, AQ-4, CL-5, and ZO-1 expressions. Naunyn-Schmiedeberg's archives of pharmacology 2 39878814
2021 [Study of the distribution of KIR3DL2 alleles among ethnic Han Chinese from Zhejiang]. Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics 1 34096033
2006 Investigation of killer cell immunoglobulin-like receptors gene KIR3DL2 diversity and confirmation of KIR3DL2*015 in a Chinese population. Tissue antigens 1 16948642

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