Affinage

KIF27

Kinesin-like protein KIF27 · UniProt Q86VH2

Length
1401 aa
Mass
160.3 kDa
Annotated
2026-06-10
33 papers in source corpus 11 papers cited in narrative 12 extracted findings
Cross-family judge faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

KIF27 is a kinesin-4 family motor protein that functions as a microtubule-based scaffold for the assembly and structural integrity of motile cilia rather than as a transporter (PMID:29351996, PMID:41400996). Although originally identified by phylogenetics as the human ortholog of Drosophila Costal-2 (Cos2), sharing its kinesin motor, Ci-binding, and Smo-binding domain architecture and being paralogous to KIF7 (PMID:15547729), mammalian KIF27 does not contribute to Hedgehog signal transduction; loss-of-function across mouse, planarian, and in vitro systems consistently fails to perturb Hh pathway readouts while disrupting ciliogenesis (PMID:19592253, PMID:19933103). Biochemically, KIF27 is a slow, processive motor with a low ATPase rate and high affinity for ATP and microtubules, can influence microtubule dynamics, and does not cooperate for fast team-based transport, consistent with a role as a microtubule-based tether of signaling complexes rather than a cargo-moving motor (PMID:29351996). KIF27 physically associates with the kinase Fu (Stk36) at the base of motile cilia, linking it to central pair apparatus components including Spag16 and Pcdp1, and Fu/KIF27 complexes are required for central pair construction and cilia orientation in oviductal epithelium (PMID:19305393, PMID:23907739). KIF27 localizes to the ciliary transition zone, where it forms a cytoskeletal scaffold that maintains transition zone architecture and enables correct ciliary incorporation of motility-generating proteins; its motile properties are dispensable for this function (PMID:41400996). Consistent with this structural role, Kif27-knockout mice develop autosomal recessive congenital hydrocephalus from dysfunctional motile cilia, and KIF27 loss produces axonemal defects and disrupted ciliary beating recapitulating a primary ciliary dyskinesia-like phenotype (PMID:21746835, PMID:41400996).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2004 Low

    Established KIF27's identity and domain architecture by defining it as the human Costal-2 ortholog, framing the hypothesis that it might function in Hedgehog signaling like its Drosophila counterpart.

    Evidence Bioinformatics and phylogenetic analysis with domain architecture comparison

    PMID:15547729

    Open questions at the time
    • Computational prediction only with no experimental validation of interactions or function
    • Hh-pathway role inferred from Drosophila ortholog, not tested in mammals
    • No localization or biochemical data
  2. 2005 Medium

    Tested whether the Fu–Kif27/Kif7 module conserves a Hh signaling role in mammals, and found it does not, redirecting attention away from canonical Hh function.

    Evidence Stk36 (Fu)-deficient knockout mouse with phenotypic analysis

    PMID:16055716

    Open questions at the time
    • Negative result for Hh does not define the alternative function
    • Does not directly assay KIF27 loss
    • No mechanistic readout for cilia at this stage
  3. 2009 High

    Connected KIF27 to ciliogenesis by demonstrating a physical interaction with Fu and linking the complex to the central pair apparatus of motile cilia rather than Hh signaling.

    Evidence Co-immunoprecipitation, mouse knockout genetics, and electron microscopy of cilia ultrastructure (Fu); parallel Kif7 KO and planarian RNAi establishing cilia-not-Hh roles

    PMID:19305393 PMID:19592253 PMID:19933103

    Open questions at the time
    • KIF27's direct contribution separated from Fu and from KIF7 not fully resolved
    • Mechanism of central pair assembly by the complex undefined
    • No structural detail of the interaction
  4. 2011 Medium

    Demonstrated that KIF27 is required in vivo for motile cilia function by showing its loss causes congenital hydrocephalus, establishing an organismal phenotype.

    Evidence Kif27 knockout mouse with neuropathological/histological analysis and ciliary function assessment

    PMID:21746835

    Open questions at the time
    • Single report
    • Molecular basis of the ciliary defect not resolved
    • Does not distinguish scaffolding from motor activity
  5. 2013 Medium

    Defined the molecular context of KIF27 at the cilium base by placing it in a Fu complex with central pair components Spag16 and Pcdp1 required for central pair construction and cilia orientation.

    Evidence Co-immunoprecipitation, immunofluorescence localization, and Fu-deficient oviduct analysis

    PMID:23907739

    Open questions at the time
    • Whether KIF27 directly binds Spag16/Pcdp1 versus via Fu unclear
    • Single-lab extension to a new tissue
    • Stoichiometry and assembly order of the complex unknown
  6. 2014 Medium

    Extended the Fu–KIF27 association to spermatogenesis, localizing KIF27 to the spermatid manchette and implicating the complex in sperm head shaping.

    Evidence Co-immunoprecipitation, immunofluorescence in the manchette, and conditional Fu KO mouse

    PMID:24525297

    Open questions at the time
    • KIF27 role inferred from interaction/co-localization, not direct Kif27 KO in germ cells
    • Functional necessity of KIF27 in manchette untested
    • Mechanism linking complex to head shaping undefined
  7. 2018 High

    Resolved KIF27's mechanochemistry, showing it is a slow processive motor unable to transport in teams, supporting a tethering role rather than cargo transport.

    Evidence In vitro single-molecule motility, microtubule dynamics, and ATPase kinetics with mutagenesis

    PMID:29351996

    Open questions at the time
    • Tethering model not yet demonstrated in cilia in vivo
    • Identity of tethered signaling complexes not established here
    • Relationship of motility to ciliary function untested
  8. 2025 High

    Established KIF27 as a transition-zone microtubule scaffold whose motility is dispensable, defining the mechanism by which it maintains TZ architecture and enables incorporation of motility proteins.

    Evidence Kif27 KO mouse genetics, high-resolution imaging, in situ cryo-electron tomography, single-molecule motility assays, and proteomics

    PMID:41400996

    Open questions at the time
    • Specific TZ interactors and how they are recruited not fully detailed in this summary
    • How scaffolding regulates motility-protein incorporation mechanistically unresolved
    • Human disease genetics for KIF27-associated PCD not established in the corpus

Open questions

Synthesis pass · forward-looking unresolved questions
  • How KIF27 scaffolding activity is molecularly coupled to transition-zone assembly and to the gating/incorporation of axonemal motility components remains to be defined, as does any direct link to human ciliopathy.
  • No structural model of the KIF27 scaffold at the TZ
  • TZ interactor network only partially characterized
  • No timeline evidence for KIF27 mutations in human disease

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 2 GO:0005198 structural molecule activity 1 GO:0140657 ATP-dependent activity 1
Localization
GO:0005929 cilium 3 GO:0005856 cytoskeleton 1
Pathway
R-HSA-1852241 Organelle biogenesis and maintenance 2
Partners
Complex memberships
central pair apparatustransition zone

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 KIF27 was identified as the human ortholog of Drosophila Costal-2 (Cos2) by bioinformatics and phylogenetic analysis. KIF27 shares the same domain structure as Cos2, including a kinesin motor (KISc) domain, Ci-binding domain, and Smo-binding domain. KIF7 was identified as a paralog of KIF27 within the human genome. Bioinformatics/phylogenetic analysis; domain architecture comparison International journal of oncology Low 15547729
2005 Mouse Fu (Stk36)-deficient mice do not exhibit embryonic phenotypes indicative of perturbed Hh signaling, suggesting that the Fu–Kif27/Kif7 complex does not have a conserved role in mammalian Hh signal transduction, in contrast to the Drosophila pathway. Gene-targeted knockout mouse; phenotypic analysis Molecular and cellular biology Medium 16055716
2009 Mouse Fu (Stk36) physically interacts with Kif27, a mammalian Cos2 orthologue. This interaction was identified by co-immunoprecipitation and links Fu to known structural components of the central pair apparatus of motile 9+2 cilia. Fu is essential for construction of the central pair apparatus and is linked to ciliogenesis rather than Hh signaling in mice. Co-immunoprecipitation; mouse knockout genetics; electron microscopy of cilia ultrastructure Nature High 19305393
2009 In vitro analysis of mammalian Kif7 and Kif27 led to the conclusion that neither protein has a role in Hh signaling (negative result for Hh pathway function in mammals). Kif7 accumulates at the distal tip of primary cilia in a Hh-dependent manner and is required for Gli3 localization to cilia and processing of Gli3 to its repressor form. Kif7 knockout mice; immunofluorescence localization; Gli3 processing assays Current biology : CB Medium 19592253
2009 In planarians, RNAi knockdown of Cos2/Kif27/Kif7 orthologs does not result in detectable Hh signaling defects but is essential for ciliogenesis, establishing a mechanistic link between Kif27-family proteins and cilia function independent of Hh signaling. RNA interference in planarians; phenotypic analysis of cilia and Hh pathway readouts Science (New York, N.Y.) Medium 19933103
2011 Kif27 knockout mice develop autosomal recessive congenital hydrocephalus, and the pathogenic mechanism is attributed to dysfunctional motile cilia, placing KIF27 as an essential component of motile ciliogenesis in vivo. Gene knockout mouse; neuropathological and histological analysis; ciliary function assessment Veterinary pathology Medium 21746835
2013 Fu (Stk36) physically associates with Kif27 at the base of motile cilia and with known central pair components Spag16 and Pcdp1 in oviductal epithelium. Fu-deficient mouse oviducts show defects in central pair construction and cilia orientation, placing Kif27 as part of a complex required for central pair apparatus assembly. Co-immunoprecipitation; immunofluorescence localization; Fu-deficient mouse oviduct analysis Developmental dynamics : an official publication of the American Association of Anatomists Medium 23907739
2014 Kif27 is detected in the manchette of spermatids, and Fu (Stk36) interacts with Kif27 in the context of spermatogenesis. Conditional inactivation of Fu in male germ cells causes infertility with abnormal sperm head shaping and periaxonemal structure defects, placing Kif27 as part of the Fu-containing complex in spermatid head shaping structures. Co-immunoprecipitation; immunofluorescence localization in manchette; conditional KO mouse Developmental biology Medium 24525297
2016 Sequence similarities between KIF21A, KIF7, and KIF27 in the regulatory domain suggest a conserved autoinhibitory mechanism (antiparallel coiled-coil regulatory domain inhibiting the motor domain) shared among kinesin-4 family members. The KIF21A regulatory domain interacts with the KIF21B motor domain, and analogous sequences in KIF27 suggest this regulation is conserved. Crystal structure of KIF21A regulatory domain; domain-interaction assay; sequence conservation analysis with KIF27 Scientific reports Low 27485312
2018 KIF27 is a slow and processive kinesin whose mechanochemical behavior arises from a slow ATPase rate and high affinity for both ATP and microtubules. KIF27 can influence microtubule dynamics. Unlike KIF7 (immotile due to inability to release ADP upon microtubule binding), KIF27 moves slowly and processively but cannot cooperate for fast processive transport in teams. Neither KIF7 nor KIF27 functions as a transporter; instead they are proposed to act as microtubule-based tethers of signaling complexes. In vitro single-molecule motility assays; microtubule dynamics assays; ATPase kinetics; mutagenesis-guided mechanistic analysis The Journal of cell biology High 29351996
2025 KIF27 localizes to the transition zone (TZ) of motile cilia and forms a cytoskeletal scaffold that promotes TZ integrity. Loss of KIF27 causes specific defects in axonemal structure and disrupts cilia beating, leading to a primary ciliary dyskinesia (PCD)-like phenotype. The motile properties of KIF27 are dispensable for its function in cilia assembly; instead, KIF27 acts as a microtubule scaffold to regulate TZ architecture and enable correct ciliary incorporation of motility-generating proteins. KIF27 interactors at the TZ were identified by proteomics. Mouse genetics (KO); high-resolution imaging; in situ cryo-electron tomography; single-molecule motility assays; proteomics Proceedings of the National Academy of Sciences of the United States of America High 41400996
2025 KIF27 promotes the integrity of the transition zone (TZ), a diffusion barrier at the cilium base. Loss of KIF27 results in defects in axonemal structure and cilia beating recapitulating primary ciliary dyskinesia. KIF27's motile properties are dispensable for this function; it acts as a microtubule scaffold to regulate TZ architecture and enable ciliary incorporation of motility-generating proteins. (Preprint version of PMID:41400996, confirms same findings prior to peer review.) Mouse genetics; single-molecule motility assays; proteomics; high-resolution imaging; in situ cryo-tomography bioRxivpreprint High

Source papers

Stage 0 corpus · 33 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2009 Planarian Hh signaling regulates regeneration polarity and links Hh pathway evolution to cilia. Science (New York, N.Y.) 199 19933103
2009 The mammalian Cos2 homolog Kif7 plays an essential role in modulating Hh signal transduction during development. Current biology : CB 189 19592253
2006 Hedgehog signaling pathway and gastrointestinal stem cell signaling network (review). International journal of molecular medicine 156 17089004
2005 Hedgehog signaling pathway and gastric cancer. Cancer biology & therapy 148 16258256
2009 Fused has evolved divergent roles in vertebrate Hedgehog signalling and motile ciliogenesis. Nature 120 19305393
2011 Congenital hydrocephalus in genetically engineered mice. Veterinary pathology 115 21746835
2006 WNT antagonist, SFRP1, is Hedgehog signaling target. International journal of molecular medicine 100 16328026
2010 Hedgehog signaling update. American journal of medical genetics. Part A 89 20635334
2005 Mice deficient in the fused homolog do not exhibit phenotypes indicative of perturbed hedgehog signaling during embryonic development. Molecular and cellular biology 87 16055716
2004 KIF27 is one of orthologs for Drosophila Costal-2. International journal of oncology 57 15547729
2005 Delineation of the minimal commonly deleted segment and identification of candidate tumor-suppressor genes in del(9q) acute myeloid leukemia. Genes, chromosomes & cancer 47 16015647
2014 Mammalian Fused is essential for sperm head shaping and periaxonemal structure formation during spermatogenesis. Developmental biology 40 24525297
2019 Integrated miRNA and mRNA expression profiling identifies novel targets and pathological mechanisms in autoimmune thyroid diseases. EBioMedicine 38 31735554
2020 Whole genome sequencing of elite athletes. Biology of sport 36 32879552
2018 Altered chemomechanical coupling causes impaired motility of the kinesin-4 motors KIF27 and KIF7. The Journal of cell biology 31 29351996
2013 Fused (Stk36) is a ciliary protein required for central pair assembly and motile cilia orientation in the mammalian oviduct. Developmental dynamics : an official publication of the American Association of Anatomists 29 23907739
2005 Comparative genomics on Sonic hedgehog orthologs. Oncology reports 27 16142377
2016 Structural basis for misregulation of kinesin KIF21A autoinhibition by CFEOM1 disease mutations. Scientific reports 23 27485312
2004 Characterization of KIF7 gene in silico. International journal of oncology 23 15547730
2012 Structural insights into human Kif7, a kinesin involved in Hedgehog signalling. Acta crystallographica. Section D, Biological crystallography 22 22281744
2021 Genetic basis of elite combat sports athletes: a systematic review. Biology of sport 17 34937977
2018 Characterization of acute myeloid leukemia with del(9q) - Impact of the genes in the minimally deleted region. Leukemia research 15 30476680
2022 Genomic analyses of claw disorders in Holstein cows: Genetic parameters, trait associations, and genome-wide associations considering interactions of SNP and heat stress. Journal of dairy science 13 36028345
2014 Novel interstitial 2.6 Mb deletion on 9q21 associated with multiple congenital anomalies. American journal of medical genetics. Part A 13 24501764
2023 Liver transcriptome profiles of dairy cows with different serum metabotypes. Journal of dairy science 9 37806621
2005 Characterization of KIF12 gene in silico. Oncology reports 5 15643526
2019 High-Density Cell Arrays for Genome-Scale Phenotypic Screening. SLAS discovery : advancing life sciences R & D 3 30682322
2017 Human and mouse microarrays-guided expression analysis of membrane protein trafficking-related genes in MDCK cells, a canine epithelial model for apical and basolateral differential protein targeting. Biochimie open 2 29450149
2025 Hedgehog Signaling Functions in Spermatogenesis and Keeping Hemolymph-Testis Barrier Stability in Eriocheir sinensis. International journal of molecular sciences 1 40508185
2025 The kinesin-4 protein KIF27 forms a cytoskeletal scaffold at the transition zone to promote motile cilia structural integrity. Proceedings of the National Academy of Sciences of the United States of America 1 41400996
2024 Molecular genetic foundation of a sex-linked tailless trait in Hongshan chicken by whole genome data analysis. Poultry science 1 38603937
2021 Genetic variants in the Hedgehog signaling pathway genes are associated with gastric cancer risk in a Chinese Han population. Journal of biomedical research 1 35403607
2026 Correlation Analysis of BLTP1 (KIAA1109) and KIF27 Gene Polymorphisms with Wool Traits in Subo Merino Sheep. Genes 0 41898830

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