Affinage

KATNAL1

Katanin p60 ATPase-containing subunit A-like 1 · UniProt Q9BW62

Length
490 aa
Mass
55.4 kDa
Annotated
2026-06-10
13 papers in source corpus 6 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

KATNAL1 is a katanin p60-related microtubule-severing ATPase that remodels the microtubule cytoskeleton in specialized cell types to control morphogenesis and cell motility (PMID:22654668, PMID:30448058). In the testis it is expressed in Sertoli cells, where its ATPase activity drives the microtubule dynamics required to retain and ultimately release developing spermatids; a point mutation in its conserved ATPase domain disrupts Sertoli cell microtubules, causing premature spermatid exfoliation and male infertility (PMID:22654668). KATNAL1 acts cooperatively with its paralog KATNA1 throughout spermatogenesis to regulate the meiotic spindle, cytokinesis and midbody abscission, Golgi organization, and acrosome and manchette formation, with KATNAL1 contributing specific roles in sperm flagellum development, manchette regulation, and sperm–epithelial disengagement; its testis interactome includes cytoskeletal and vesicle trafficking proteins (PMID:37882691). In the nervous system KATNAL1 is the dominant neuronal katanin and exhibits greater severing activity and intracellular stability than KATNA1, properties conferred by its amino-terminal half, and it restrains neuronal process elongation while supporting neuronal migration, motile cilia of ependymal cells, and associated behaviors (PMID:28373692, PMID:30448058).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2012 High

    Established KATNAL1 as a functional microtubule-severing protein whose ATPase activity is required in Sertoli cells for spermatid retention, linking its enzymatic function to a defined reproductive phenotype.

    Evidence ENU point mutation in the ATPase domain in a mouse genetic model with histology and immunolocalization of the seminiferous epithelium

    PMID:22654668

    Open questions at the time
    • Did not directly demonstrate severing activity in vitro for the wild-type or mutant protein
    • Did not identify the binding partners mediating microtubule remodeling in Sertoli cells
  2. 2017 Medium

    Extended KATNAL1 function beyond the testis, showing it is required for neuronal migration and morphology, motile ciliary function, and normal behavior, implicating it in brain development.

    Evidence Loss-of-function mouse allele with brain morphology, neuronal migration, ciliary, and behavioral assays

    PMID:28373692

    Open questions at the time
    • Single lab; molecular mechanism linking severing to migration and cilia not resolved
    • Behavioral deficits not mechanistically connected to specific cellular defects
  3. 2017 Low

    Provided a structural rationale for ATP engagement by the ATPase domain, supporting the enzymatic model.

    Evidence Homology modeling, molecular dynamics simulation, and molecular docking (computational only)

    PMID:28093975

    Open questions at the time
    • Computational only with no experimental validation of ATP binding
    • No experimental structure of KATNAL1
  4. 2018 Medium

    Distinguished KATNAL1 from its paralog KATNA1 by showing higher severing activity and greater stability, mapping both properties to the N-terminal half and defining KATNAL1 as the dominant neuronal severing enzyme that restrains process elongation.

    Evidence Cycloheximide chase, domain-swap chimeras, cell-based severing assays, and siRNA knockdown with process elongation readout in Neuro2a cells

    PMID:30448058

    Open questions at the time
    • Activity and stability assayed in cultured cells, not with purified protein
    • Structural basis within the N-terminal half not pinpointed
  5. 2023 High

    Resolved the division of labor between KATNAL1 and KATNA1 across spermatogenesis and identified candidate physical partners, establishing cooperative and KATNAL1-specific roles in spindle, cytokinesis, organelle, and flagellar morphogenesis.

    Evidence Single and double knockout mice with comparative phenotyping plus mass spectrometry testis interactome

    PMID:37882691

    Open questions at the time
    • Interactome partners not validated as direct or functionally required
    • Which severing events are KATNAL1- versus KATNA1-dependent at the molecular level not fully separated
  6. 2024 Medium

    Linked KATNAL1 to a regulatory and disease context by showing miR-548az-5p suppression of KATNAL1 disorganizes microtubules and promotes senescence in amniotic epithelial cells.

    Evidence miRNA microarray, target prediction, miR-548az-5p overexpression in hAECs with microtubule, senescence, and proliferation assays

    PMID:39638877

    Open questions at the time
    • No direct mutagenesis or rescue of KATNAL1 to confirm causality
    • Single lab; effects on microtubules inferred from miRNA overexpression rather than direct KATNAL1 manipulation

Open questions

Synthesis pass · forward-looking unresolved questions
  • How KATNAL1 severing activity is spatially and temporally regulated, and the identity of the direct partners that recruit it to specific microtubule populations, remains unresolved.
  • No validated direct physical partner with defined functional role
  • No experimental structure of the active severing complex
  • Mechanism connecting severing to migration, ciliary, and behavioral phenotypes not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 3 GO:0016787 hydrolase activity 1 GO:0140657 ATP-dependent activity 1
Localization
GO:0005856 cytoskeleton 2
Pathway
R-HSA-1474165 Reproduction 2 R-HSA-1266738 Developmental Biology 1
Partners

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 KATNAL1, a katanin p60-related microtubule-severing protein, is expressed in testicular Sertoli cells from 15.5 dpc and loss-of-function (point mutation in the conserved ATPase domain via ENU mutagenesis) disrupts Sertoli cell microtubule dynamics, causing premature exfoliation of spermatids from the seminiferous epithelium and male-specific infertility. ENU mutagenesis (point mutation in ATPase domain), mouse genetic model, histological analysis of seminiferous epithelium, immunolocalization PLoS genetics High 22654668
2017 Loss-of-function of Katnal1 in mice causes defects in neuronal migration and morphology in the brain, as well as defects in motile cilia of ventricular ependymal cells, in addition to behavioural deficits in circadian rhythms, sleep, anxiety and learning/memory. Mouse genetic model (loss-of-function allele), brain morphological analysis, neuronal migration assays, ciliary function assays, behavioural testing Molecular psychiatry Medium 28373692
2018 KATNAL1 exhibits higher microtubule-severing activity and greater intracellular stability compared to KATNA1 in Neuro2a cells; the amino-terminal half of KATNAL1 is the determinant of both its higher activity and stability. KATNAL1 is dominantly expressed in neurons, and its knockdown enhances process elongation in Neuro2a cells, whereas KATNA1 knockdown does not. Cycloheximide chase analysis, chimeric protein swapping (amino/carboxyl terminal halves), microtubule-severing activity assays in cultured cells, siRNA knockdown with process elongation phenotypic readout Biochemical and biophysical research communications Medium 30448058
2023 KATNA1 and KATNAL1 cooperatively regulate the male meiotic spindle, cytokinesis, midbody abscission, Golgi organisation, acrosome and manchette formation in mouse spermatogenesis; KATNAL1 has specific roles in sperm flagellum development, manchette regulation and sperm-epithelial disengagement. Proteomic analysis of the KATNAL1 (and KATNA1/KATNB1) testis interactome identified interactions with cytoskeletal and vesicle trafficking proteins. Single and double gene knockout mice, comparative phenotypic analysis (meiotic spindle, cytokinesis, spermatid remodelling), proteomic interactome (mass spectrometry) Development (Cambridge, England) High 37882691
2024 miR-548az-5p targets KATNAL1 mRNA in human amniotic epithelial cells; upregulation of miR-548az-5p suppresses KATNAL1 expression, disorganizes microtubules, increases senescence-associated secretory phenotype markers, and inhibits cell proliferation via cyclin D1 and CDK6, contributing to amniotic membrane senescence and labor initiation. miRNA microarray, bioinformatics target prediction, miR-548az-5p overexpression in hAECs, KATNAL1 expression measurement, immunofluorescence of microtubules, senescence and proliferation assays Scientific reports Medium 39638877
2017 Computational molecular docking confirmed that KATNAL1 binds ATP through hydrophobic and hydrogen bond interactions at its ATPase domain; a homology model was generated and validated by MD simulation. Comparative molecular modeling, molecular dynamics simulation, molecular docking Combinatorial chemistry & high throughput screening Low 28093975

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 KATNAL1 regulation of sertoli cell microtubule dynamics is essential for spermiogenesis and male fertility. PLoS genetics 67 22654668
2017 A missense mutation in Katnal1 underlies behavioural, neurological and ciliary anomalies. Molecular psychiatry 34 28373692
2019 Circ_KATNAL1 regulates prostate cancer cell growth and invasiveness through the miR-145-3p/WISP1 pathway. Biochemistry and cell biology = Biochimie et biologie cellulaire 31 31800303
2014 A newly recognized 13q12.3 microdeletion syndrome characterized by intellectual disability, microcephaly, and eczema/atopic dermatitis encompassing the HMGB1 and KATNAL1 genes. American journal of medical genetics. Part A 27 24664804
2022 circ-Katnal1 Enhances Inflammatory Pyroptosis in Sepsis-Induced Liver Injury through the miR-31-5p/GSDMD Axis. Mediators of inflammation 17 35979014
2018 KATNAL1 is a more active and stable isoform of katanin, and is expressed dominantly in neurons. Biochemical and biophysical research communications 11 30448058
2014 Association between an alternative promoter polymorphism and sperm deformity rate is due to modulation of the expression of KATNAL1 transcripts in Chinese Holstein bulls. Animal genetics 10 24990491
2023 The katanin A-subunits KATNA1 and KATNAL1 act co-operatively in mammalian meiosis and spermiogenesis to achieve male fertility. Development (Cambridge, England) 8 37882691
2022 Common genetic variation in KATNAL1 non-coding regions is involved in the susceptibility to severe phenotypes of male infertility. Andrology 6 35752927
2014 Lack of association of KATNAL1 gene sequence variants and azoospermia in humans. Journal of assisted reproduction and genetics 6 24913027
2017 Molecular Modeling and Dynamics Simulation Analysis of KATNAL1 for Identification of Novel Inhibitor of Sperm Maturation. Combinatorial chemistry & high throughput screening 4 28093975
2024 miR-548az-5p induces amniotic epithelial cell senescence by regulating KATNAL1 expression in labor. Scientific reports 3 39638877
2023 Circ_KATNAL1 promotes the inflammation and apoptosis in human middle ear epithelial cells induced by lipopolysaccharide by regulating the miR-153-3p / TLR4 axis. Cellular and molecular biology (Noisy-le-Grand, France) 2 37715400

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