Affinage

IL12RB2

Interleukin-12 receptor subunit beta-2 · UniProt Q99665

Length
862 aa
Mass
97.1 kDa
Annotated
2026-06-10
26 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

IL12RB2 encodes the IL-12 receptor β2 subunit, a signaling component that transduces IL-12 stimulation into STAT4 phosphorylation and IFN-γ production, physiologically restraining aberrant B-cell activation and supporting IFN-γ-dependent tumor surveillance: its genetic inactivation in mice produces spontaneous autoimmunity, B-cell tumors, and lung carcinoma alongside IFN-γ deficiency and IL-6 upregulation (PMID:16081683). IL12RB2 expression is epigenetically gated. In Th17 cells the locus carries repressive H3K27 trimethylation that is removed upon activation or immunization, permitting IL-12R β2 upregulation; subsequent IL-12 signaling demethylates the Tbx21/T-bet locus and deviates Th17 cells toward a Th1-like profile (PMID:21307296). During human CD4 T cell activation this derepression depends on the H3K27 demethylase JMJD3, whose inhibition prevents promoter demethylation and impairs IL12RB2 induction (PMID:28947543). Promoter and intergenic-enhancer polymorphisms further tune expression: SNPs at −1035/−1023 create differential binding sites for JunB, GATA-3, and MEF-2, with the −1023G allele forming an AP-1 site that enhances JunB binding, and JunB knockdown abolishes haplotype-specific promoter activity (PMID:26552659). These variants act in a cell-type-specific manner, lowering transcriptional output and IFN-γ in T cells while raising both in NK cells (PMID:18771340), and an enhancer SNP in the IL23R–IL12RB2 intergenic region alters reporter activity, H3K4me1, and the proportion of Th1 cells (PMID:26916345).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2005 High

    Established the in vivo physiological role of IL-12Rβ2 signaling, showing it is required to restrain B-cell activation and sustain IFN-γ-dependent tumor surveillance rather than merely being a cytokine receptor subunit.

    Evidence Il12rb2 knockout mouse with histopathology, serum autoantibody assays, and splenocyte cytokine measurement

    PMID:16081683

    Open questions at the time
    • Does not resolve which downstream effectors mediate autoimmunity versus tumor phenotypes
    • IL-6 upregulation mechanism downstream of receptor loss not defined
    • Cell-intrinsic versus extrinsic contributions not dissected
  2. 2008 Medium

    Showed that IL12RB2 promoter SNPs functionally alter transcription and IFN-γ output in a cell-type-dependent manner, linking genetic variation to differential signaling capacity in T versus NK cells.

    Evidence Luciferase reporter assays in NK3.3 and Jurkat cells plus IFN-γ ELISA in primary cells from genotyped donors

    PMID:18771340

    Open questions at the time
    • Transcription factors responsible for the cell-type difference not identified in this study
    • Reporter activity may not reflect endogenous chromatin context
  3. 2011 Medium

    Identified H3K27me3 as the repressive mark gating IL12RB2 expression in Th17 cells and connected its activation-dependent removal to IL-12-driven Th1 deviation.

    Evidence ChIP for H3K27me3/H3K4me3 at Il12rb2 and Tbx21 loci in ex vivo and in vitro Th17 cells with functional deviation assay

    PMID:21307296

    Open questions at the time
    • Enzyme removing H3K27me3 not identified here
    • Single-lab finding
    • Stability of deviated phenotype not addressed
  4. 2015 Medium

    Defined JunB as a key transcriptional regulator of IL12RB2 and showed how the −1023G allele creates an AP-1 site that enhances JunB recruitment.

    Evidence TF-binding ELISA, luciferase reporter assays, and JunB siRNA knockdown in Jurkat and NK3.3 cells

    PMID:26552659

    Open questions at the time
    • Roles of GATA-3 and MEF-2 not functionally validated
    • Endogenous gene-level effect of JunB not confirmed
  5. 2015 Low

    Linked IL12RB2 promoter genotype to downstream IL-12 receptor signaling strength via STAT4 phosphorylation.

    Evidence STAT4 phosphorylation assay in T cell blasts stratified by IL12RB2 genotype

    PMID:26547104

    Open questions at the time
    • Single correlative functional assay without mechanistic dissection
    • Methodological detail limited
    • Causality from SNP to signaling not established
  6. 2016 Medium

    Mapped a disease-associated enhancer in the IL23R–IL12RB2 intergenic region whose risk allele alters chromatin state and Th1 proportions without changing IL12RB2 mRNA.

    Evidence Luciferase reporter, EMSA, H3K4me1 ChIP, flow cytometry, and RT-qPCR in CD4+ T cells from genotyped donors

    PMID:26916345

    Open questions at the time
    • The trans-acting factor binding the enhancer not identified
    • Target gene of the enhancer ambiguous given unchanged IL12RB2 mRNA
    • Mechanism linking enhancer to Th1 skewing unresolved
  7. 2017 Medium

    Identified JMJD3 as the H3K27 demethylase required for IL12RB2 derepression during human T cell activation, providing the enzymatic basis for the activation-dependent epigenetic switch.

    Evidence H3K27me3 ChIP-seq in naive/memory CD4 T cells plus JMJD3 inhibitor with IL12RB2 expression quantification

    PMID:28947543

    Open questions at the time
    • Recruitment mechanism of JMJD3 to the locus unknown
    • Inhibitor specificity not fully excluded
    • Single-lab finding

Open questions

Synthesis pass · forward-looking unresolved questions
  • How epigenetic gating (H3K27me3/JMJD3), SNP-driven transcription factor recruitment, and downstream STAT4 signaling integrate to set quantitative IL-12Rβ2 output in distinct lymphocyte lineages remains unresolved.
  • No structural or biochemical characterization of the receptor itself in this corpus
  • No unified model linking promoter and intergenic-enhancer variants to in vivo phenotypes
  • Direct molecular partners of IL-12Rβ2 not defined in the timeline

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 2
Localization
GO:0005886 plasma membrane 1
Pathway
R-HSA-168256 Immune System 3 R-HSA-162582 Signal Transduction 2

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2005 Targeted inactivation (knockout) of Il12rb2 in mice leads to spontaneous autoimmunity (immune-complex mesangial glomerulonephritis, antinuclear antibodies, lymphoid infiltrates with vasculitis and Sjögren syndrome features), B-cell tumors (plasmacytoma), and lung carcinoma, associated with strong IL-6 upregulation in splenocytes and IFN-γ deficiency, establishing that IL-12Rβ2 signaling physiologically restrains aberrant B-cell activation and supports IFN-γ-dependent tumor surveillance. Il12rb2 knockout mouse model; histopathology, serum antibody assays, cytokine measurement in splenocytes Blood High 16081683
2011 In ex vivo-isolated murine Th17 cells, the Il12rb2 locus carries repressive H3K27 trimethylation marks that restrict its expression; in vitro activation or in vivo immunization removes these marks and allows IL-12Rβ2 upregulation. IL-12 stimulation then removes H3K27me3 at the Tbx21/T-bet locus, enhancing T-bet expression and enabling deviation of Th17 cells toward a Th1-like profile. ChIP for H3K27me3 and H3K4me3 at Il12rb2 and Tbx21 loci in purified ex vivo and in vitro Th17 cells; flow cytometry; in vitro IL-12 stimulation assays Journal of immunology Medium 21307296
2017 During human naive CD4 T cell activation, H3K27me3 at the IL12RB2 promoter is dynamically removed (demethylated) predominantly within 1 day of activation; pharmacological inhibition of the H3K27 demethylase JMJD3 prevents this demethylation and impairs IL12RB2 expression, demonstrating that JMJD3-driven H3K27 demethylation is required for IL12RB2 upregulation during T cell activation. ChIP-seq for H3K27me3 at IL12RB2 promoter in naive and memory CD4 T cells; JMJD3 inhibitor treatment with quantification of IL12RB2 expression Journal of immunology Medium 28947543
2015 SNPs in the promoter region of IL12RB2 (-1035 and -1023 positions; rs3762315 and rs3762316) create differential binding sites for the transcription factors JunB, GATA-3, and MEF-2; the -1023G polymorphism creates an AP-1 consensus site that enhances JunB binding. siRNA-mediated suppression of JunB eliminates haplotype-specific differences in IL12RB2 promoter activity in both Jurkat T cells and NK3.3 cells, establishing JunB as a key transcriptional regulator of IL12RB2. ELISA-based transcription factor binding assay; luciferase reporter assays; siRNA knockdown of JunB in Jurkat T and NK3.3 cells Immunogenetics Medium 26552659
2008 SNPs in the 5' flanking region of IL12RB2 (-1035A>G and -1023A>G) have differential effects on transcriptional activity depending on cell type: variant haplotypes show higher transcriptional activity in the NK cell line NK3.3 but lower activity in Jurkat T cells. Functionally, activated T cells from carriers of variant SNPs produce significantly less IFN-γ, while NK cells from carriers produce significantly more IFN-γ. Luciferase reporter gene assays in NK3.3 and Jurkat cells; IFN-γ ELISA in activated primary T cells and NK cells from genotyped donors Journal of interferon & cytokine research Medium 18771340
2015 IL-12-driven STAT4 phosphorylation in T cell blasts from healthy individuals correlates with specific IL12RB2 promoter SNP allele variants and haplotypes, indicating that genetically determined variation in IL12RB2 promoter region influences downstream IL-12 receptor signaling strength. STAT4 phosphorylation assay (presumably phospho-flow or ELISA) in T cell blasts from individuals stratified by IL12RB2 genotype Immunobiology Low 26547104
2016 The AS-associated SNP rs11209032 in the IL23R-IL12RB2 intergenic region resides within a ~1.14 kb putative enhancer; the risk 'A' allele shows reduced luciferase reporter activity and reduced H3K4me1 methylation in CD4+ T cells from homozygous risk-allele carriers, and decreased binding of nuclear extract (~3.5-fold). Homozygosity for the risk allele is associated with increased proportions of IFN-γ+ (Th1) CD4+ T cells, but does not affect IL12RB2 mRNA levels. Luciferase reporter assay in HEK293T cells; EMSA (electrophoretic mobility gel shift assay); ChIP for H3K4me1; flow cytometry for IFN-γ+ CD4+ T cells; RT-qPCR for IL12RB2 mRNA Annals of the rheumatic diseases Medium 26916345

Source papers

Stage 0 corpus · 26 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2010 Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. Nature genetics 527 20622878
2009 Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants. The New England journal of medicine 499 19458352
2005 Lack of Il12rb2 signaling predisposes to spontaneous autoimmunity and malignancy. Blood 98 16081683
2011 A GWAS follow-up study reveals the association of the IL12RB2 gene with systemic sclerosis in Caucasian populations. Human molecular genetics 67 22076442
2012 Association study of IL10 and IL23R-IL12RB2 in Iranian patients with Behçet's disease. Arthritis and rheumatism 65 22378604
2011 Epigenetic changes at Il12rb2 and Tbx21 in relation to plasticity behavior of Th17 cells. Journal of immunology (Baltimore, Md. : 1950) 50 21307296
2016 An ankylosing spondylitis-associated genetic variant in the IL23R-IL12RB2 intergenic region modulates enhancer activity and is associated with increased Th1-cell differentiation. Annals of the rheumatic diseases 46 26916345
2008 IL12RB2 and ABCA1 genes are associated with susceptibility to radiation dermatitis. Clinical cancer research : an official journal of the American Association for Cancer Research 34 18927311
2016 Identification of susceptibility SNPs in IL10 and IL23R-IL12RB2 for Behçet's disease in Han Chinese. The Journal of allergy and clinical immunology 33 27464962
2017 H3K27 Methylation Dynamics during CD4 T Cell Activation: Regulation of JAK/STAT and IL12RB2 Expression by JMJD3. Journal of immunology (Baltimore, Md. : 1950) 32 28947543
2011 Bovine IFNGR2, IL12RB1, IL12RB2, and IL23R polymorphisms and MAP infection status. Mammalian genome : official journal of the International Mammalian Genome Society 18 21597988
2008 Polymorphisms in the 5' flanking region of IL12RB2 are associated with susceptibility to periodontal diseases in the Japanese population. Journal of clinical periodontology 18 18353079
2011 Role of rs1343151 IL23R and rs3790567 IL12RB2 polymorphisms in biopsy-proven giant cell arteritis. The Journal of rheumatology 14 21285166
2016 Association study of rs924080 and rs11209032 polymorphisms of IL23R-IL12RB2 in a Northern Chinese Han population with Behcet's disease. Human immunology 7 27660093
2015 IL12RB2 Polymorphisms correlate with risk of lung adenocarcinoma. Immunobiology 7 26547104
2008 Differential effects of polymorphisms in the 5' flanking region of IL12RB2 on NK- and T-cell activity. Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research 7 18771340
2024 Chlamydia muridarum Associated Pulmonary and Urogenital Disease and Pathology in a Colony of Enzootically Infected Il12rb2 Deficient and Stat1 Knockout Mice. Comparative medicine 6 38561234
2018 Single-Nucleotide Polymorphisms in IL23R-IL12RB2 (rs1495965) Are Highly Prevalent in Patients with Behcet's Uveitis and Vary Between Populations. Ocular immunology and inflammation 5 29792538
2017 Polymorphisms of IL12RB2 May Affect the Natural History of Primary Biliary Cholangitis: A Single Centre Study. Journal of immunology research 5 28299343
2015 The potential of interleukin 12 receptor beta 2 (IL12RB2) and tumor necrosis factor receptor superfamily member 8 (TNFRSF8) gene as diagnostic biomarkers of oral lichen planus (OLP). Acta odontologica Scandinavica 5 25915578
2012 IL12RB2 gene is associated with the age of type 1 diabetes onset in Croatian family Trios. PloS one 5 23152861
2015 Functional analysis of differences in transcriptional activity conferred by genetic variants in the 5' flanking region of the IL12RB2 gene. Immunogenetics 3 26552659
2014 Polymorphisms assessment in the promoter region of IL12RB2 in Amazon leprosy patients. Human immunology 3 24486579
2026 Integrated bioinformatics and machine learning deciphering IL12RB2 and FYN as key immune biomarkers in brucellosis. International immunopharmacology 0 41605052
2025 Association of IL12RB2, RORC, and class II HLA polymorphisms with severe erythema multiforme of regorafenib in Japanese patients with colorectal cancer. Cancer chemotherapy and pharmacology 0 41284062
2011 Five-step process for screening antisense compounds for efficacy: gene target IL-12Rb2. Methods in molecular biology (Clifton, N.J.) 0 21748639

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