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HCLS1

Hematopoietic lineage cell-specific protein · UniProt P14317

Length
486 aa
Mass
54.0 kDa
Annotated
2026-06-10
14 papers in source corpus 6 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/5 claims corpus-supported (80%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

HCLS1 (HS1) is a hematopoietic cell-specific actin-binding protein and tyrosine kinase substrate that couples receptor signaling to transcriptional programs governing myeloid and lymphoid cell function (PMID:23001182, PMID:8978766). In granulopoiesis, G-CSF stimulation triggers HAX1-dependent phosphorylation of HCLS1, which then binds the transcription factor LEF-1 and transports it into the nucleus to drive LEF-1 autoregulation; loss of HCLS1 produces neutropenia in mice (PMID:23001182). HCLS1 phosphorylation is also engaged downstream of wild-type Flt3 receptor signaling to support Flt3-ligand-dependent proliferation of myeloid progenitors (PMID:23017497), and it serves as a major substrate of the tyrosine kinase p75HS1 acting downstream of antigen receptors in B and T lymphocytes (PMID:8978766). In chronic myeloid leukemia, NAMPT deacetylates and activates HCLS1, which is required for clonogenic proliferation and regulates the downstream targets IL1RAP and LEF-1 within a NAMPT/HCLS1/LEF-1 axis (PMID:40349748). HCMV latency upregulates HCLS1 in CD14+ monocytes in a US28-dependent manner, stabilizing actin structure and enhancing monocyte motility and transendothelial migration (PMID:31569051).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 1996 Medium

    Establishing the genomic location and biochemical identity of HCLS1 placed it as a defined tyrosine kinase substrate acting in antigen receptor signaling in lymphocytes.

    Evidence FISH chromosomal mapping to 3q13 and identification as a p75HS1 substrate

    PMID:8978766

    Open questions at the time
    • Functional consequence of HCLS1 phosphorylation in lymphocytes not resolved here
    • No direct partners or downstream effectors defined
  2. 2012 High

    Defining the G-CSF/HAX1/HCLS1/LEF-1 axis answered how a cytoplasmic kinase substrate transmits a granulopoietic signal to the nucleus, linking HCLS1 directly to a neutropenia phenotype.

    Evidence Co-IP, nuclear fractionation, phosphorylation assays, HCLS1-knockout neutropenic mice, and patient mutation analysis

    PMID:23001182

    Open questions at the time
    • Identity of the kinase directly phosphorylating HCLS1 downstream of HAX1 not specified
    • Mechanism of LEF-1 nuclear transport by HCLS1 not structurally defined
  3. 2012 Medium

    Comparative phosphoproteomics linked HCLS1 phosphorylation to Flt3-receptor-driven proliferation, extending its signaling role beyond G-CSF to another myeloid growth pathway.

    Evidence Phosphoprotein purification, 2D-PAGE, mass spectrometry, and proliferation assays in FDC-P1 cells

    PMID:23017497

    Open questions at the time
    • Single cell-line system
    • Direct kinase-substrate relationship and downstream effectors not established
  4. 2019 Medium

    Showing US28-dependent HCLS1 upregulation during HCMV latency connected the protein's actin-binding activity to monocyte migratory behavior, a route for viral dissemination.

    Evidence Proteome analysis of latently infected monocytes, US28-deletion virus, motility/transendothelial migration assays, and actin staining

    PMID:31569051

    Open questions at the time
    • Molecular link between US28 and HCLS1 induction unresolved
    • Mechanism of HCLS1-mediated actin stabilization not detailed
  5. 2025 Medium

    Identifying NAMPT-mediated deacetylation of HCLS1 revealed a post-translational activation step that makes HCLS1 essential for leukemic clonogenic proliferation via IL1RAP and LEF-1.

    Evidence NAMPT inhibition, deacetylation assays, clonogenic growth assays, Western blot, and shRNA knockdown in CML cells

    PMID:40349748

    Open questions at the time
    • Single lab, single study
    • Acetylation site(s) and direct enzymatic mechanism not mapped
    • Whether NAMPT acts directly or via a deacetylase intermediary unclear
  6. 2025 Low

    A gain/loss-of-function study in colorectal cells positioned HCLS1 as a suppressor of TLR4/MYD88/NF-κB signaling and tumor proliferation, suggesting context-dependent roles outside hematopoiesis.

    Evidence Overexpression/knockdown in HCT116 cells, CCK-8 assays, Western blot, and AAV-overexpression xenografts

    PMID:40533777

    Open questions at the time
    • Mechanism by which HCLS1 acts on TLR4/NF-κB not directly established
    • Single lab, not independently confirmed
    • Relevance to endogenous HCLS1 in non-hematopoietic tissue unclear

Open questions

Synthesis pass · forward-looking unresolved questions
  • The direct kinase(s), acetylation sites, and structural basis by which HCLS1 simultaneously binds actin and shuttles transcription factors remain undefined across the corpus.
  • No structural model of HCLS1–LEF-1 or HCLS1–actin interaction
  • Unified picture reconciling actin-binding and transcription-factor-transport functions absent

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140110 transcription regulator activity 2 GO:0008092 cytoskeletal protein binding 1
Localization
GO:0005634 nucleus 1 GO:0005829 cytosol 1 GO:0005856 cytoskeleton 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-1266738 Developmental Biology 1
Partners

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 Upon G-CSF stimulation, HCLS1 is phosphorylated and binds the transcription factor LEF-1, transporting LEF-1 into the nucleus to induce LEF-1 autoregulation; HAX1 is required upstream for G-CSF-triggered HCLS1 phosphorylation, and HCLS1-deficient mice are neutropenic. Co-immunoprecipitation, nuclear fractionation, phosphorylation assays, HCLS1-knockout mouse model, patient mutation analysis Nature medicine High 23001182
2012 HCLS1 phosphorylation is specifically implicated in FL (Flt3-ligand)-dependent proliferation downstream of wild-type Flt3 receptor in myeloid progenitor cells, as identified by comparative phosphoproteome analysis. Phosphoprotein purification, 2D-PAGE, mass spectrometry, functional proliferation assays in FDC-P1 cell line Journal of proteomics Medium 23017497
2019 HCMV latency-associated upregulation of HCLS1 in CD14+ monocytes occurs in a US28-dependent manner, stabilizes actin structure, and increases cell motility and transendothelial migration. Proteome analysis of latently infected monocytes, US28-deletion virus, motility and transendothelial migration assays, actin staining iScience Medium 31569051
2025 NAMPT deacetylates and activates HCLS1 protein in CML cells; activated HCLS1 is essential for clonogenic proliferation of CML cells and regulates downstream targets IL1RAP and LEF-1 in the NAMPT/HCLS1/LEF-1 pathway. NAMPT inhibition, deacetylation assays, clonogenic growth assays, Western blot, shRNA knockdown of HCLS1 Experimental hematology Medium 40349748
2025 HCLS1 overexpression inhibits HCT116 colorectal cancer cell proliferation and suppresses TLR4/MYD88/NF-κB (p-p65) signaling; 5-alkylresorcinol exerts anti-cancer effects partly through activating HCLS1. Overexpression/knockdown plasmids transfected into HCT116 cells, CCK-8 proliferation assay, Western blot, xenograft mouse model with AAV-mediated HCLS1 overexpression European journal of medical research Low 40533777
1996 The human HCLS1 gene maps to chromosome 3q13 and encodes a major substrate of protein-tyrosine kinase p75HS1, involved in signal transduction downstream of antigen receptors in B and T lymphocytes. Fluorescence in situ hybridization (FISH) using cDNA and genomic DNA probes Cytogenetics and cell genetics Medium 8978766

Source papers

Stage 0 corpus · 14 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Identification and functional characterization of hCLS1, a human cardiolipin synthase localized in mitochondria. The Biochemical journal 79 16716149
2012 Interactions among HCLS1, HAX1 and LEF-1 proteins are essential for G-CSF-triggered granulopoiesis. Nature medicine 73 23001182
2006 Cloning and characterization of a cDNA encoding human cardiolipin synthase (hCLS1). Journal of lipid research 52 16547353
2018 Hematopoietic cell-specific lyn substrate (HCLS1 or HS1): A versatile actin-binding protein in leukocytes. Journal of leukocyte biology 31 30537294
2016 Kostmann's Disease and HCLS1-Associated Protein X-1 (HAX1). Journal of clinical immunology 30 27943080
2019 Human Cytomegalovirus Upregulates Expression of HCLS1 Resulting in Increased Cell Motility and Transendothelial Migration during Latency. iScience 18 31569051
2018 Identification of the Functional Autophagy-Regulatory Domain in HCLS1-Associated Protein X-1 That Resists Against Oxidative Stress. DNA and cell biology 6 29461873
1996 The human HCLS1 gene maps to chromosome 3q13 by fluorescence in situ hybridization. Cytogenetics and cell genetics 6 8978766
2022 Hsa-miR223-3p circulating level is upregulated in Friedreich's ataxia and inversely associated with HCLS1 associated protein X-1, HAX-1. Human molecular genetics 5 35015850
2012 Phosphoproteome analyses reveal specific implications of Hcls1, p21-activated kinase 1 and Ezrin in proliferation of a myeloid progenitor cell line downstream of wild-type and ITD mutant Fms-like tyrosine kinase 3 receptors. Journal of proteomics 4 23017497
2025 Therapeutic efficacy of 5-alkylresorcinol on progression of colorectal cancer by activating HCLS1 and suppressing TLR4/MYD88/NF-κB signaling. European journal of medical research 2 40533777
2025 NAMPT-mediated deacetylation of HCLS1 protein promotes clonogenic growth of pediatric CML cells. Experimental hematology 0 40349748
2024 Correlation between elevated HCLS1 levels and heart failure: A diagnostic biomarker. Medicine 0 38847679
2014 WITHDRAWN: Assessment of hematopoietic and neurologic pathophysiology of HCLS1-associated protein X-1 deficiency in a Hax1-knockout mouse model. Experimental hematology 0 25448489

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