Affinage

GMNN

Geminin · UniProt O75496

Length
209 aa
Mass
23.6 kDa
Annotated
2026-06-10
10 papers in source corpus 3 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

Geminin (GMNN) is a cell-cycle-regulated inhibitor of DNA re-replication that licenses orderly genome duplication by binding and inhibiting the replication-licensing factor CDT1 (PMID:40455380). Its activity is controlled at the protein level: geminin carries an N-terminal destruction box near residue Met28 that targets it for anaphase-promoting complex (APC)-mediated degradation at the metaphase-anaphase transition, so the protein accumulates in S/G2/M and is cleared in G1 (PMID:26637980). This phase-specific proteolysis is sufficiently robust that truncated geminin retaining only its degradation signals can be used as a fluorescent biosensor to mark S/G2/M phases, and the geminin N-terminal degron has been exploited to restrict Cas9 activity to S/G2, biasing repair toward homology-directed repair (PMID:29899280). Two distinct gain-of-function disease mechanisms have been defined: mutations that delete the destruction box stabilize geminin and prolong replication inhibition, causing autosomal-dominant Meier-Gorlin syndrome (PMID:26637980), whereas missense mutations that weaken the geminin-CDT1 interaction activate CHK1, induce DNA damage, and arrest preimplantation embryos (PMID:40455380).

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2015 Medium

    Established that geminin's abundance is set by APC recognition of an N-terminal destruction box, and that loss of this degron is a disease-causing gain-of-function mechanism rather than a loss of function.

    Evidence Human genetics identifying de novo destruction-box-disrupting mutations combined with cell-cycle phase and protein-stability analysis

    PMID:26637980

    Open questions at the time
    • Does not directly reconstitute APC-geminin recognition in vitro
    • Penetrance and tissue-specific consequences of stabilized geminin not resolved
  2. 2018 Medium

    Demonstrated that the geminin N-terminal degron is portable and confers cell-cycle-restricted stability on a heterologous protein, confirming the degron is autonomous and functional out of context.

    Evidence Cas9-GMNN N-terminal peptide fusion in porcine fibroblasts with HDR knock-in frequency readout

    PMID:29899280

    Open questions at the time
    • Single cell type and single readout
    • Does not map the minimal degron residues required
  3. 2025 Medium

    Defined the CDT1-binding interface as the functional output of geminin, showing that weakened geminin-CDT1 binding triggers CHK1 activation, DNA damage, and embryo arrest.

    Evidence Whole-exome/Sanger sequencing of patients, RNA-seq of zygotes/one-cell embryos, CDT1 binding assay, and CHK1/DNA-damage marker assessment

    PMID:40455380

    Open questions at the time
    • Single lab; binding deficit not structurally mapped
    • Causal chain from reduced binding to CHK1 activation inferred from markers, not dissected step-by-step
  4. 2025 Medium

    Confirmed that geminin proteolysis is phase-specific and reciprocal to CDT1 degradation, validating geminin as a live-cell reporter of S/G2/M.

    Evidence Fucci(CA) fluorescent truncated-GMNN biosensor in a transgenic chicken line with in vitro and in vivo live imaging (preprint)

    Open questions at the time
    • Preprint, single study
    • Uses truncated protein retaining only degradation signals, not full-length geminin function

Open questions

Synthesis pass · forward-looking unresolved questions
  • How geminin-CDT1 binding affinity, geminin abundance, and APC-mediated turnover are quantitatively coordinated to enforce single-round replication remains unresolved.
  • No structural model of the geminin-CDT1 or geminin-APC interaction in the corpus
  • Direct biochemical reconstitution of CDT1 inhibition by geminin not present
  • Tissue-specific thresholds linking degron/binding defects to distinct phenotypes unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 1
Pathway
R-HSA-1640170 Cell Cycle 2 R-HSA-69306 DNA Replication 2
Partners

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 De novo heterozygous truncating or missense mutations in GMNN that alter sites 5' to residue Met28 (within the destruction box) result in geminin proteins lacking the destruction box, conferring increased protein stability and prolonged inhibition of DNA replication. The anaphase-promoting complex (APC) normally recognizes the destruction box near the 5' end of geminin to degrade it during the metaphase-anaphase transition; mutations disrupting this sequence prevent APC-mediated degradation, constituting a gain-of-function mechanism causing autosomal-dominant Meier-Gorlin syndrome. Human genetics (identification of de novo mutations) combined with cell-cycle phase analysis; mechanistic interpretation supported by known APC-destruction box biology and functional data on protein stability American journal of human genetics Medium 26637980
2025 Rare dominant missense mutations in GMNN decrease geminin's binding to CDT1, leading to activation of CHK1, DNA damage, and cell cycle disturbance, resulting in preimplantation embryo arrest. This establishes that geminin prevents DNA re-replication by inhibiting CDT1, and that impaired geminin–CDT1 interaction disrupts correct cell cycle progression in early embryos. Whole-exome sequencing and Sanger sequencing in patients; RNA sequencing of mouse zygotes and patient one-cell embryo; binding assay (CDT1 interaction) and assessment of CHK1 activation and DNA damage markers Science China. Life sciences Medium 40455380
2018 Fusion of Cas9 to the N-terminal peptide of GMNN (geminin) causes the Cas9 fusion protein to be degraded during NHEJ-dominated cell cycle phases (G1), thereby enriching Cas9 activity in S/G2 phases where HDR predominates, resulting in an approximately two-fold increase in homology-directed repair knock-in frequency in porcine fibroblasts. CRISPR/Cas9-GMNN fusion construct expressed in porcine fetal fibroblasts; point mutation-specific real-time PCR screening for HDR events Genes Medium 29899280
2025 Truncated forms of the human GMNN protein (lacking full-length sequences but retaining degradation signals) are reciprocally degraded relative to CDT1-derived fragments across the cell cycle, allowing fluorescent fusions to distinguish S, G2, and M phases from G1. This confirms that GMNN protein levels are cell-cycle-regulated through phase-specific proteolysis, enabling its use as a biosensor for S/G2/M phases. Fucci(CA) cell cycle biosensor system using fluorescently tagged truncated GMNN in transgenic chicken line (FuChi); in vitro and in vivo live imaging bioRxivpreprint Medium

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Frequent amplification of CENPF, GMNN and CDK13 genes in hepatocellular carcinomas. PloS one 81 22912832
2015 De Novo GMNN Mutations Cause Autosomal-Dominant Primordial Dwarfism Associated with Meier-Gorlin Syndrome. American journal of human genetics 65 26637980
2018 Efficient Knock-in of a Point Mutation in Porcine Fibroblasts Using the CRISPR/Cas9-GMNN Fusion Gene. Genes 20 29899280
2018 Generation of Functional Hepatocytes from Human Adipose-Derived MYC+ KLF4+ GMNN+ Stem Cells Analyzed by Single-Cell RNA-Seq Profiling. Stem cells translational medicine 10 30272835
2021 Evaluation of NUF2 and GMNN Expression in Prostate Cancer: Potential Biomarkers for Prostate Cancer Screening. Reports of biochemistry & molecular biology 7 34604412
2025 GMNN mutations cause female infertility characterized by preimplantation embryo arrest through regulating DNA re-replication. Science China. Life sciences 1 40455380
2024 Evaluation of BUBR1, MCM2, and GMNN as oral cancer biomarkers. European journal of cancer prevention : the official journal of the European Cancer Prevention Organisation (ECP) 1 39480819
2022 Different expression of DNMT1, PCNA, MCM2, CDT1, EZH2, GMNN and EP300 genes in lymphomagenesis of low vs. high grade lymphoma. Pathology, research and practice 1 36257233
2024 GMNN and DLL1 mutation-related spondylocarpotarsal synostosis: a case report. Journal of Yeungnam medical science 0 39659197
2006 The association of polymorphisms of CDT1 and GMNN gene with the risk of breast cancer in Chinese women: a case-control analysis. Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics 0 17029205

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