Affinage

GK2

Glycerol kinase 2 · UniProt Q14410

Length
553 aa
Mass
60.6 kDa
Annotated
2026-06-10
12 papers in source corpus 2 papers cited in narrative 2 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 2/2 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

GK2 was identified as a candidate galactokinase through its ability to functionally complement a galactokinase-deficient (gal1−) yeast strain, restoring in vivo galactokinase activity and indicating that the encoded 458-amino-acid protein can substitute for yeast galactokinase (PMID:1438294). However, when expressed in mammalian COS cells, GK2 produced no detectable galactokinase activity despite confirmed mRNA expression, while a control galactokinase construct was active under the same conditions (PMID:7542884). The enzymatic function and physiological role of GK2 in mammalian cells therefore remain uncharacterized in the available corpus; beyond the yeast complementation and the negative mammalian activity assay, no substrate, interacting partner, localization, or pathway role has been established.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 1992 Medium

    Whether the GK2 gene product had any galactokinase function was unknown; isolating the cDNA by rescuing a galactokinase-deficient yeast strain established that GK2 can functionally substitute for galactokinase in vivo and is genetically distinct from GK1.

    Evidence Yeast complementation of gal1− mutant with human cDNA library plus chromosomal mapping

    PMID:1438294

    Open questions at the time
    • Complementation in yeast does not demonstrate galactokinase activity in mammalian cells
    • No direct biochemical measurement of enzyme kinetics or substrate specificity
    • Physiological role and tissue context in humans not addressed
  2. 1995 Medium

    Whether GK2 acts as a galactokinase in a mammalian setting was tested directly; expression in COS cells yielded no detectable galactokinase activity despite confirmed transcription, showing GK2 does not function as a galactokinase under these conditions and leaving its biochemical role unresolved.

    Evidence Transient expression in COS cells with galactokinase enzymatic activity assay and Northern blot mRNA confirmation

    PMID:7542884

    Open questions at the time
    • Negative result may reflect missing cofactors, post-translational modification, or improper folding in COS cells rather than absence of intrinsic activity
    • No alternative substrate tested
    • Endogenous tissue-specific expression and function not examined

Open questions

Synthesis pass · forward-looking unresolved questions
  • The native enzymatic activity, true substrate, subcellular localization, and physiological function of mammalian GK2 remain undefined.
  • No purified-protein biochemistry to define catalytic activity or kinetics
  • No identified physical partners or pathway placement
  • No in vivo or knockout phenotype data

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
No controlled-vocabulary terms were assigned to this entry.

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1992 A human GK2 cDNA encoding a predicted 458-amino-acid protein was isolated by functional complementation of a galactokinase-deficient (gal1−) Saccharomyces cerevisiae strain, establishing that GK2 encodes a galactokinase (EC 2.7.1.6) capable of substituting for yeast galactokinase in vivo. The GK2 gene was mapped to chromosome 15, distinct from the previously mapped GK1 locus on chromosome 17q23-25. The encoded protein shares 29% amino acid identity with S. carlsbergensis galactokinase. Yeast complementation of gal1− mutant with human cDNA library; chromosomal mapping Proceedings of the National Academy of Sciences of the United States of America Medium 1438294
1995 When GK2 cDNA was expressed in COS cells alongside GALK1 cDNA, only GALK1 produced high levels of galactokinase activity; GK2-transfected cells showed no detectable galactokinase activity above background, despite confirmed mRNA expression by Northern blot. This demonstrates that GK2 does not function as a galactokinase in mammalian cells under these conditions, leaving its biochemical role uncertain. Transient expression in COS cells with galactokinase enzymatic activity assay; Northern blot confirmation of mRNA expression Biochemical and biophysical research communications Medium 7542884

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1992 Cloning of a human galactokinase gene (GK2) on chromosome 15 by complementation in yeast. Proceedings of the National Academy of Sciences of the United States of America 27 1438294
2015 Identification of a panel of complex autoantigens (LGALS3, PHB2, MUC1, and GK2) in combination with CA15-3 for the diagnosis of early-stage breast cancer. Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 16 26289852
2013 Original Nerve Growth Factor Mimetic Dipeptide GK-2 Restores Impaired Cognitive Functions in Rat Models of Alzheimer's Disease. Acta naturae 16 24303204
2014 Behavioral effect of dipeptide NGF mimetic GK-2 in an in vivo model of rat traumatic brain injury and its neuroprotective and regenerative properties in vitro. The International journal of neuroscience 12 24950445
2019 A Novel Dipeptide NGF Mimetic GK-2 Selectively Activating the PI3K/AKT Signaling Pathway Promotes the Survival of Pancreatic β-Cells in a Rat Model of Diabetes. Acta naturae 5 31024748
1995 Comparison of the enzymatic activities of human galactokinase GALK1 and a related human galactokinase protein GK2. Biochemical and biophysical research communications 5 7542884
2015 Effectiveness of GK-2, a Nerve Growth Factor Mimetic, in Preventing Post-Resuscitation Changes in the Brain. Bulletin of experimental biology and medicine 4 26388581
2025 Pharmacokinetics, tissue distribution, in vivo metabolism and liver microsomal metabolism of GK-A, GK-2 and Eucomic acid in rats were studied by liquid chromatography-tandem mass spectrometry and mass spectrometry imaging of Ginkgo semen extract. Journal of ethnopharmacology 1 41207346
2023 Protective effect of GK2 fused BLVRA protein against oxidative stress-induced dopaminergic neuronal cell damage. The FEBS journal 1 36688733
2022 Low molecular weight NGF mimetic GK-2 normalizes the parameters of glucose and lipid metabolism and exhibits a hepatoprotective effect on a prediabetes model in obese Wistar rats. Clinical and experimental pharmacology & physiology 1 35748804
2010 [Neuroprotective effect of low-molecular peptide mimetic (GK-2) of nerve growth factor is related to activated synthesis of heat shock proteins (hsp32 and hsp70) and increased phosphorylation of TrkA receptor]. Eksperimental'naia i klinicheskaia farmakologiia 1 21395008
2015 [Effect of the nerve growth factor mimetic GK-2 on post-resuscitation expression of neurotrophic factors]. Patologicheskaia fiziologiia i eksperimental'naia terapiia 0 26571801

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