Affinage

EPM2AIP1

EPM2A-interacting protein 1 · UniProt Q7L775

Length
607 aa
Mass
70.4 kDa
Annotated
2026-06-09
18 papers in source corpus 6 papers cited in narrative 5 extracted findings
Cross-family judge faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

EPM2AIP1 is a glycogen synthase-associated protein that links the laforin-dependent regulation of glycogen metabolism to whole-body energy homeostasis (PMID:12782127, PMID:24142699). It was first identified as a direct binding partner of laforin (the EPM2A gene product) and colocalizes with laforin in cells and on polyglucosan masses (Lafora bodies) in vivo (PMID:12782127, PMID:15102711). Functionally, EPM2AIP1 modulates the allosteric activation of glycogen synthase by glucose 6-phosphate; in its absence, hepatic glycogen synthesis is reduced, liver fat increases, and animals develop hepatic insulin resistance while being protected from age-related obesity (PMID:24142699). Independently of its metabolic role, EPM2AIP1 is transcribed from a bidirectional promoter shared with MLH1, such that a -93G>A promoter polymorphism reciprocally apportions transcriptional activity between the two genes by altering nuclear-factor binding (PMID:21206982), and methylation of this shared promoter coordinately silences both MLH1 and EPM2AIP1 protein expression in endometrial carcinoma (PMID:34772843, PMID:40468018).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2003 Medium

    Established the first molecular partner of EPM2AIP1, placing it within the laforin signaling/glycogen-disease axis rather than as an orphan protein.

    Evidence Yeast two-hybrid screen of human brain cDNA, coimmunoprecipitation of transfected proteins, and EPM2A deletion-construct mapping with subcellular colocalization

    PMID:12782127

    Open questions at the time
    • Interaction shown for transfected/overexpressed proteins, not at endogenous levels
    • Functional consequence of the laforin-EPM2AIP1 interaction not defined
    • Binding interface on EPM2AIP1 not mapped
  2. 2004 Medium

    Demonstrated where EPM2AIP1 acts in disease tissue by localizing it directly on polyglucosan inclusions, connecting it physically to the pathological substrate of Lafora disease.

    Evidence Immunogold electron microscopy and colocalization in a laforin-trap transgenic mouse model

    PMID:15102711

    Open questions at the time
    • Does not establish whether EPM2AIP1 contributes to Lafora body formation or is recruited passively
    • Single localization method in a transgenic trap model
    • No human tissue confirmation in this finding
  3. 2013 High

    Resolved the biochemical function of EPM2AIP1 by showing it tunes allosteric activation of glycogen synthase, defining a concrete role in hepatic glycogen synthesis and insulin sensitivity.

    Evidence Epm2aip1 knockout mouse with glycogen synthase activity assays, hepatic glycogen measurement, and metabolic phenotyping

    PMID:24142699

    Open questions at the time
    • Whether EPM2AIP1 binds glycogen synthase directly or acts through laforin is unresolved
    • Structural basis for modulating glucose 6-phosphate allostery unknown
    • Tissue specificity beyond liver not fully characterized
  4. 2010 Medium

    Showed that EPM2AIP1 expression is genetically coupled to MLH1 via a shared bidirectional promoter, explaining co-regulation of two functionally unrelated genes.

    Evidence Bidirectional luciferase reporter assays of the MLH1/EPM2AIP1 promoter and EMSA across cell lines

    PMID:21206982

    Open questions at the time
    • Identity of the polymorphism-sensitive nuclear factors not determined
    • In vivo relevance of allele-specific apportioning not established
    • No link between this regulation and EPM2AIP1's metabolic function
  5. 2022 Medium

    Demonstrated that promoter methylation coordinately silences EPM2AIP1 with MLH1, making EPM2AIP1 protein loss a correlate of MLH1 epigenetic inactivation in tumors.

    Evidence Immunohistochemistry for EPM2AIP1 correlated with MLH1 promoter methylation by qPCR across 119 endometrial carcinomas, replicated in a second series

    PMID:34772843 PMID:40468018

    Open questions at the time
    • Correlative IHC/methylation data without in vitro mechanistic dissection
    • Functional consequence of EPM2AIP1 loss in tumor cells not tested
    • Whether EPM2AIP1 silencing contributes to tumorigenesis or is a bystander is unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • How EPM2AIP1's two distinct contexts — glycogen synthase regulation/laforin binding versus MLH1-coupled transcriptional regulation — relate mechanistically, and whether EPM2AIP1 has an independent function in either, remains open.
  • No structure or domain-level mechanism for any EPM2AIP1 activity
  • No demonstration of direct glycogen synthase binding
  • No causal role established for EPM2AIP1 loss in cancer phenotypes

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 1
Localization
GO:0005634 nucleus 1
Pathway
R-HSA-1430728 Metabolism 1
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2003 EPM2AIP1 protein was identified as a direct binding partner of laforin (EPM2A gene product) through a yeast two-hybrid screen of a human brain cDNA library, confirmed by coimmunoprecipitation of in vivo-transfected protein. Interaction specificity was validated using EPM2A deletion constructs. EPM2AIP1 and laforin also show subcellular colocalization. Yeast two-hybrid screen, coimmunoprecipitation of transfected proteins, EPM2A deletion construct analysis, subcellular colocalization Genomics Medium 12782127
2004 EPM2AIP1 protein localizes on polyglucosan masses (Lafora bodies) in vivo, as demonstrated by immunogold electron microscopy and colocalization studies in a laforin-trap transgenic mouse model. Immunogold electron microscopy, transgenic mouse model with laforin trap, colocalization on Lafora bodies Human molecular genetics Medium 15102711
2013 Epm2aip1 is a glycogen synthase (GS)-associated protein. Absence of Epm2aip1 in mice impairs allosteric activation of GS by glucose 6-phosphate, decreases hepatic glycogen synthesis, increases liver fat, causes hepatic insulin resistance, and protects against age-related obesity. Epm2aip1 knockout mouse model, GS activity assays (allosteric activation by glucose 6-phosphate), hepatic glycogen measurement, metabolic phenotyping The Journal of biological chemistry High 24142699
2010 The MLH1-93G>A promoter polymorphism bidirectionally affects transcription from the shared MLH1/EPM2AIP1 promoter: the -93G allele drives higher MLH1 promoter activity, while the -93A allele drives higher EPM2AIP1 promoter activity. EMSAs indicate the polymorphism alters the affinity of nuclear protein factors binding to this region. Luciferase reporter assays with MLH1/EPM2AIP1 promoter constructs in forward and reverse orientation, electrophoretic mobility shift assay (EMSA) Oncology reports Medium 21206982
2022 MLH1 promoter methylation silences EPM2AIP1 protein expression (nuclear EPM2AIP1 loss detected by IHC in 81.8% of methylated endometrial tumors with 94.5% sensitivity), establishing that the shared MLH1/EPM2AIP1 bidirectional promoter methylation coordinately suppresses both genes' expression. Immunohistochemistry for EPM2AIP1 protein, correlated with MLH1 promoter methylation testing by quantitative PCR in 119 endometrial carcinoma cases The American journal of surgical pathology Medium 34772843 40468018

Source papers

Stage 0 corpus · 18 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 MLH1 germline epimutations as a factor in hereditary nonpolyposis colorectal cancer. Gastroenterology 138 16285940
2004 Laforin preferentially binds the neurotoxic starch-like polyglucosans, which form in its absence in progressive myoclonus epilepsy. Human molecular genetics 80 15102711
2013 Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma. Genome research 43 24105770
2012 MLH1 methylation screening is effective in identifying epimutation carriers. European journal of human genetics : EJHG 34 22763379
2003 Identification of a novel protein interacting with laforin, the EPM2a progressive myoclonus epilepsy gene product. Genomics 33 12782127
2010 Functional effects of the MLH1-93G>A polymorphism on MLH1/EPM2AIP1 promoter activity. Oncology reports 28 21206982
2019 DNA methylation changes that precede onset of dysplasia in advanced sessile serrated adenomas. Clinical epigenetics 21 31200767
2013 Deficiency of a glycogen synthase-associated protein, Epm2aip1, causes decreased glycogen synthesis and hepatic insulin resistance. The Journal of biological chemistry 19 24142699
2007 Altered DNA copy number in patients with different seizure disorder type: by array-CGH. Brain & development 18 17573221
2023 MSI-XGNN: an explainable GNN computational framework integrating transcription- and methylation-level biomarkers for microsatellite instability detection. Briefings in bioinformatics 10 37833839
2022 EPM2AIP1 Immunohistochemistry Can Be Used as Surrogate Testing for MLH1 Promoter Methylation in Endometrial Cancer. The American journal of surgical pathology 10 34772843
2023 The admixed brushtail possum genome reveals invasion history in New Zealand and novel imprinted genes. Nature communications 8 37848431
2022 WGCNA-Based DNA Methylation Profiling Analysis on Allopurinol-Induced Severe Cutaneous Adverse Reactions: A DNA Methylation Signature for Predisposing Drug Hypersensitivity. Journal of personalized medicine 6 35455641
2022 Transcriptome analysis of peripheral blood mononuclear cells in patients with type 1 diabetes mellitus. Endocrine 5 35976509
2011 A new locus for autosomal dominant generalized epilepsy associated with mild mental retardation on chromosome 3p. Epilepsia 5 21480884
2025 EPM2 AIP1 immunohistochemistry as a surrogate of promoter methylation analysis in endometrial carcinoma. Virchows Archiv : an international journal of pathology 4 40468018
2024 EPM2AIP1 immunohistochemistry is inadequate as a surrogate marker for MLH1 promoter hypermethylation testing in colorectal cancer. Human pathology 3 38945374
2026 Exceptional Response to Lenvatinib plus Pembrolizumab after Pembrolizumab Failure in MLH1-Methylated Deficient Mismatch Repair/Microsatellite Instability-High Endometrial Cancer: A Case Report. Case reports in oncology 0 42136687

Missed literature

Know a paper Affinage missed for EPM2AIP1? Flag it for the maintainers and the community.

No submissions yet.