Affinage

EPHA1

Ephrin type-A receptor 1 · UniProt P21709

Length
976 aa
Mass
108.1 kDa
Annotated
2026-06-09
100 papers in source corpus 2 papers cited in narrative 2 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

EPHA1 is an ephrin-A-class receptor tyrosine kinase that controls cell morphology and motility, acting as a negative regulator of cell spreading and migration upon ligand engagement (PMID:19118217). Ligand-binding studies establish that EPHA1 preferentially binds ephrin-A1 while retaining class-promiscuous binding to other A-type ephrin ligands, and that its expression is enriched in differentiated epithelial tissues including skin, thymus, kidney, and adrenal cortex (PMID:11519828). Mechanistically, ephrin-A1 stimulation drives EPHA1 to associate, via its C-terminal SAM domain, with the ankyrin region of integrin-linked kinase (ILK); this interaction is independent of EPHA1 kinase activity but requires ligand stimulation (PMID:19118217). Kinase-active EPHA1 suppresses ILK activity, and a constitutively active ILK mutant (S343D) rescues EPHA1-mediated spreading defects and attenuates RhoA activation, placing EPHA1 at the head of an ILK→RhoA→ROCK signaling axis that inhibits cell spreading and migration (PMID:19118217). Beyond these findings, no further mechanistic detail has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2001 Medium

    Defining the ligand specificity and tissue distribution of EPHA1 established it as an ephrin-A-class receptor expressed in differentiated epithelia, framing where its signaling is likely relevant.

    Evidence Soluble and native receptor binding assays, in situ hybridization on tissue sections, and genomic/chromosomal analysis of murine EphA1

    PMID:11519828

    Open questions at the time
    • Binding promiscuity across the full ephrin-A panel quantified only for murine receptor
    • Functional consequence of receptor expression in each tissue not addressed
    • No downstream signaling characterized in this study
  2. 2009 High

    Linking EPHA1 to ILK answered how the receptor controls cell shape and motility, showing it acts through a kinase-independent SAM-domain interaction that suppresses ILK and engages RhoA-ROCK.

    Evidence Co-immunoprecipitation with domain-deletion mapping, ILK activity and RhoA activation assays, and rescue with the kinase-active ILK S343D mutant in cell spreading/migration assays

    PMID:19118217

    Open questions at the time
    • How kinase-active EPHA1 reduces ILK activity at the molecular level is not resolved
    • The downstream RhoA-ROCK effectors mediating spreading inhibition are not delineated
    • Findings derive from a single lab and defined cell systems

Open questions

Synthesis pass · forward-looking unresolved questions
  • The phosphorylation substrates of EPHA1 and the physiological contexts in which the ILK-RhoA-ROCK axis operates in vivo remain undefined.
  • No direct kinase substrates identified
  • No structural model of the EPHA1 SAM–ILK ankyrin interaction
  • Physiological/developmental role in epithelial tissues not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0048018 receptor ligand activity 1 GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005886 plasma membrane 1
Pathway
R-HSA-162582 Signal Transduction 1
Partners

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2009 EphA1 activation (via ephrin-A1 stimulation) inhibits cell spreading and migration in a RhoA-ROCK-dependent manner. EphA1 interacts with integrin-linked kinase (ILK) through its C-terminal SAM domain (EphA1) and the ankyrin region of ILK; this interaction is independent of EphA1 kinase activity but dependent on ephrin-A1 stimulation. Kinase-active EphA1 reduces ILK activity, and expression of a kinase-active ILK mutant (S343D) rescues EphA1-mediated spreading defects and attenuates RhoA activation, placing EphA1 upstream of ILK-RhoA-ROCK in regulating cell morphology and motility. Co-immunoprecipitation, domain-deletion mapping, ILK activity assay, RhoA activation assay, rescue experiments with ILK S343D mutant, cell spreading/migration assays Journal of cell science High 19118217
2001 Murine EphA1 preferentially binds ephrin-A1 (as does the human homologue) but also shows significant binding to other A-type ephrin ligands, consistent with class-promiscuous EphA subclass binding. mEphA1 mRNA is expressed in differentiated epithelial tissues including skin, adult thymus, kidney, and adrenal cortex. Binding assays with soluble recombinant and native mEphA1, in situ hybridization on tissue sections, chromosomal localization, genomic organization analysis Growth factors (Chur, Switzerland) Medium 11519828

Source papers

Stage 0 corpus · 100 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Common variants at ABCA7, MS4A6A/MS4A4E, EPHA1, CD33 and CD2AP are associated with Alzheimer's disease. Nature genetics 1635 21460840
2008 Eph-ephrin bidirectional signaling in physiology and disease. Cell 1062 18394988
2010 Eph receptors and ephrins in cancer: bidirectional signalling and beyond. Nature reviews. Cancer 1016 20179713
1998 The ephrins and Eph receptors in neural development. Annual review of neuroscience 941 9530499
2005 Eph receptor signalling casts a wide net on cell behaviour. Nature reviews. Molecular cell biology 889 15928710
2016 Mechanisms of ephrin-Eph signalling in development, physiology and disease. Nature reviews. Molecular cell biology 511 26790531
2001 Multiple roles of EPH receptors and ephrins in neural development. Nature reviews. Neuroscience 505 11256076
1999 Eph receptors and ephrins restrict cell intermingling and communication. Nature 407 10403252
1999 Eph receptors and ephrins: effectors of morphogenesis. Development (Cambridge, England) 389 10207129
2013 Eph receptor signaling and ephrins. Cold Spring Harbor perspectives in biology 340 24003208
2007 Bidirectional Eph-ephrin signaling during axon guidance. Trends in cell biology 333 17420126
2003 'Eph'ective signaling: forward, reverse and crosstalk. Journal of cell science 299 12808016
2014 Therapeutic targeting of EPH receptors and their ligands. Nature reviews. Drug discovery 292 24378802
2004 The role of ephrins and Eph receptors in cancer. Cytokine & growth factor reviews 283 15561600
2002 The ephrins and Eph receptors in angiogenesis. Cytokine & growth factor reviews 264 11750881
2004 Eph/ephrin signaling in morphogenesis, neural development and plasticity. Current opinion in cell biology 262 15363810
2008 Eph/ephrin signaling: networks. Genes & development 254 18281458
2014 Eph receptors and ephrins: therapeutic opportunities. Annual review of pharmacology and toxicology 240 25292427
2010 Architecture of Eph receptor clusters. Proceedings of the National Academy of Sciences of the United States of America 219 20505120
2010 Eph/ephrin molecules--a hub for signaling and endocytosis. Genes & development 216 21078817
2007 Regulation of angiogenesis by Eph-ephrin interactions. Trends in cardiovascular medicine 215 17574121
2019 Emerging Roles for Eph Receptors and Ephrin Ligands in Immunity. Frontiers in immunology 204 31333644
2007 Cell-cell signaling via Eph receptors and ephrins. Current opinion in cell biology 204 17928214
2012 Eph/Ephrin signaling in injury and inflammation. The American journal of pathology 193 23021982
1997 The Eph family of receptors. Current opinion in cell biology 181 9330863
2000 Eph receptors and ephrins: regulators of guidance and assembly. International review of cytology 177 10730216
2012 Eph/ephrin signalling during development. Development (Cambridge, England) 171 23093422
2004 Eph receptor-ephrin bidirectional signals that target Ras and Rho proteins. Cellular signalling 158 15093606
2009 Synapse development and plasticity: roles of ephrin/Eph receptor signaling. Current opinion in neurobiology 152 19497733
2003 Eph signaling: a structural view. Trends in neurosciences 151 12495863
2006 Roles of Eph receptors and ephrins in the normal and damaged adult CNS. Brain research reviews 131 16774788
2002 Diverse roles for the Eph family of receptor tyrosine kinases in carcinogenesis. Microscopy research and technique 129 12242697
2008 Eph, a protein family coming of age: more confusion, insight, or complexity? Science signaling 128 18413883
2005 Eph receptor and ephrin ligand-mediated interactions during angiogenesis and tumor progression. Experimental cell research 128 16330025
2012 Bone cell interactions through Eph/ephrin: bone modeling, remodeling and associated diseases. Cell adhesion & migration 127 22660185
2010 Ephrins and Eph receptors in stem cells and cancer. Current opinion in cell biology 127 20810264
2000 Control of cell behaviour by signalling through Eph receptors and ephrins. Current opinion in neurobiology 118 10851175
2019 Eph receptor signalling: from catalytic to non-catalytic functions. Oncogene 111 31406248
2003 Eph receptors and ephrins. The international journal of biochemistry & cell biology 111 12479863
2004 Eph receptor tyrosine kinases in tumor and tumor microenvironment. Current pharmaceutical design 106 15544526
2012 Eph receptors and ephrins as targets for cancer therapy. Journal of cellular and molecular medicine 103 22862837
2023 Eph receptors and ephrins in cancer progression. Nature reviews. Cancer 96 37996538
2006 Putative dual role of ephrin-Eph receptor interactions in inflammation. IUBMB life 91 16801213
2008 Eph/ephrin signaling in epithelial development and homeostasis. The international journal of biochemistry & cell biology 90 18761422
2009 EphA1 interacts with integrin-linked kinase and regulates cell morphology and motility. Journal of cell science 89 19118217
1997 Reciprocal expression of the Eph receptor Cek5 and its ligand(s) in the early retina. Developmental biology 89 9070326
2011 Eph and ephrin signaling in the formation of topographic maps. Seminars in cell & developmental biology 87 22044886
2011 Eph receptors and ephrins in neuron-astrocyte communication at synapses. Glia 85 21850709
2004 Eph receptors, ephrins, and synaptic function. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry 85 15271258
2011 Targeting Eph receptors with peptides and small molecules: progress and challenges. Seminars in cell & developmental biology 83 22044885
2011 Eph-dependent cell-cell adhesion and segregation in development and cancer. Cellular and molecular life sciences : CMLS 83 22204021
2011 Eph receptor function is modulated by heterooligomerization of A and B type Eph receptors. The Journal of cell biology 81 22144690
2013 Eph/ephrin recognition and the role of Eph/ephrin clusters in signaling initiation. Biochimica et biophysica acta 80 23628727
2010 The role of Eph receptors and ephrin ligands in colorectal cancer. International journal of cancer 80 20039322
2012 Concepts and consequences of Eph receptor clustering. Seminars in cell & developmental biology 78 22261642
2001 Eph receptors and neural plasticity. Nature reviews. Neuroscience 75 11256081
2014 Eph receptor and ephrin function in breast, gut, and skin epithelia. Cell adhesion & migration 69 25482622
2014 Mechanisms of boundary formation by Eph receptor and ephrin signaling. Developmental biology 68 25448699
2017 Targeting Eph/ephrin system in cancer therapy. European journal of medicinal chemistry 67 28780190
2006 Bidirectional ephrin/Eph signaling in synaptic functions. Brain research 61 17166489
2011 Eph/ephrin interactions modulate muscle satellite cell motility and patterning. Development (Cambridge, England) 60 22071104
2001 Expression of Eph receptors in skeletal muscle and their localization at the neuromuscular junction. Molecular and cellular neurosciences 59 11414792
2016 Eph Receptor Tyrosine Kinases in Tumor Immunity. Cancer research 57 27811149
2000 Roles of Eph receptors and ephrins in segmental patterning. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 57 11128993
2011 Ectodomain structures of Eph receptors. Seminars in cell & developmental biology 56 22044883
2014 Ephrin-Eph signaling in embryonic tissue separation. Cell adhesion & migration 55 25482630
2010 Expression of EphA1 in gastric carcinomas is associated with metastasis and survival. Oncology reports 55 21042754
2006 Emerging roles of the Angiopoietin-Tie and the ephrin-Eph systems as regulators of cell trafficking. Journal of leukocyte biology 55 16864601
2018 Differential Expression Patterns of Eph Receptors and Ephrin Ligands in Human Cancers. BioMed research international 54 29682554
2005 Characterization of a novel Eph receptor tyrosine kinase, EphA10, expressed in testis. Biochimica et biophysica acta 54 15777695
2005 Eph-modulated cell morphology, adhesion and motility in carcinogenesis. IUBMB life 54 16012051
2011 Role of Eph/ephrin tyrosine kinase in malignant glioma. Neuro-oncology 53 21856686
2021 The Role of the Eph Receptor Family in Tumorigenesis. Cancers 50 33430066
2020 The role of Eph receptors in cancer and how to target them: novel approaches in cancer treatment. Expert opinion on investigational drugs 50 32348169
2014 Eph- and ephrin-dependent mechanisms in tumor and stem cell dynamics. Cellular and molecular life sciences : CMLS 50 24794629
1997 The Eph family: a multitude of receptors that mediate cell recognition signals. Cell and tissue research 50 9321683
2011 Dancing with the dead: Eph receptors and their kinase-null partners. Biochemistry and cell biology = Biochimie et biologie cellulaire 49 21455264
2018 Specific Eph receptor-cytoplasmic effector signaling mediated by SAM-SAM domain interactions. eLife 48 29749928
2014 Regulation of cell differentiation by Eph receptor and ephrin signaling. Cell adhesion & migration 47 25482623
2011 Eph/ephrin signaling in epidermal differentiation and disease. Seminars in cell & developmental biology 47 22040910
2020 Eph Receptors in the Immunosuppressive Tumor Microenvironment. Cancer research 46 33177063
2014 The role of proteases in regulating Eph/ephrin signaling. Cell adhesion & migration 46 25482632
2008 Downregulation of EphA1 in colorectal carcinomas correlates with invasion and metastasis. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 46 19011600
2022 The Eph receptor A4 plays a role in demyelination and depression-related behavior. The Journal of clinical investigation 44 35271507
2021 The Clinical Impact of the EPH/Ephrin System in Cancer: Unwinding the Thread. International journal of molecular sciences 44 34445116
2015 Targeting the Eph System with Peptides and Peptide Conjugates. Current drug targets 44 26212263
2012 Regulation of tumor initiation and metastatic progression by Eph receptor tyrosine kinases. Advances in cancer research 44 22588054
2005 Eph proteins and the assembly of auditory circuits. Hearing research 44 16080997
2019 Ephrins and Eph Receptor Signaling in Tissue Repair and Fibrosis. Current rheumatology reports 43 30980212
2017 Eph-ephrin signaling modulated by polymerization and condensation of receptors. Proceedings of the National Academy of Sciences of the United States of America 43 29192024
2012 Eph/ephrin signaling in cell-cell and cell-substrate adhesion. Frontiers in bioscience (Landmark edition) 43 22201756
2014 Beyond boundaries--Eph:ephrin signaling in neurogenesis. Cell adhesion & migration 41 25482631
2001 Characterization of the Epha1 receptor tyrosine kinase: expression in epithelial tissues. Growth factors (Chur, Switzerland) 41 11519828
2013 Therapeutic perspectives of Eph-ephrin system modulation. Drug discovery today 40 24291785
2021 Eph-Ephrin Signaling Mediates Cross-Talk Within the Bone Microenvironment. Frontiers in cell and developmental biology 39 33634116
2014 Eph receptor tyrosine kinases in cancer stem cells. Cytokine & growth factor reviews 39 24933439
2014 Promiscuous and specific recognition among ephrins and Eph receptors. Biochimica et biophysica acta 39 25017878
2017 Cell segregation and border sharpening by Eph receptor-ephrin-mediated heterotypic repulsion. Journal of the Royal Society, Interface 38 28747399
2008 Eph/ephrin signalling and function in oncogenesis: lessons from embryonic development. Current cancer drug targets 38 18781894
1997 Eph-related receptors and their ligands: mediators of contact dependent cell interactions. Journal of molecular medicine (Berlin, Germany) 38 9297625

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