Affinage

DTX2

Probable E3 ubiquitin-protein ligase DTX2 · UniProt Q86UW9

Length
622 aa
Mass
67.2 kDa
Annotated
2026-06-09
12 papers in source corpus 14 papers cited in narrative 14 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DTX2 is a RING/WWE-domain E3 ubiquitin ligase that controls the abundance and activity of diverse substrates through both conventional lysine-linked polyubiquitin chains and unconventional ubiquitylation of ADP-ribose, thereby regulating ferroptosis, DNA repair, telomerase transcription, and Notch/RUNX signaling (PMID:38992439, PMID:40058099, PMID:35198878). Through its RING domain it assembles K48-linked chains that drive proteasomal degradation of NCOA4, HSD17B4, HLTF, and FTO, suppressing ferritinophagy-driven and peroxisomal lipid-dependent ferroptosis and modulating m6A demethylation (PMID:39366066, PMID:40058099, PMID:39661064, PMID:38163902). In contrast, DTX2-mediated K63-linked ubiquitination of the transcription factor NFIC promotes its binding to the hTERT promoter, sustaining telomerase activity and telomere length in cancer cells (PMID:35198878). DTX2 can also ubiquitinate substrates non-degradatively: it modifies RUNX1 to block its acetylation and induce cytoplasmic mislocalization, restraining RUNX1 transcriptional output (PMID:37500075). Its WWE/DELTEX ADP-ribose reader domains recruit DTX2 to poly-ADP-ribosylated DNA double-strand breaks, where it promotes BRCA1 foci formation and homologous recombination at the expense of NHEJ, sensitizing cells to PARP inhibition when depleted (PMID:38992439). The same ADP-ribose-recognition capacity enables a distinct chemistry in which DTX2 ubiquitylates ADP-ribose moieties directly — generating monoubiquitin-MAR marks on PARP7 and tankyrase and recognizing PARP7-installed ADP-ribosyl degrons on the androgen receptor to drive lysine-independent AR degradation [PMID:bio_10.1101_2025.05.11.653360, PMID:bio_10.1101_2025.04.09.648013, PMID:bio_10.1101_2024.12.21.629908]. DTX2 additionally influences Notch signaling outputs in cancer cell migration and zebrafish glial proliferation (PMID:37087577, PMID:39001828).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 2006 Low

    Established the basic architecture of DTX2 as a candidate E3 ligase, defining the domains that would later prove functionally central.

    Evidence RACE cDNA cloning, Northern blot, and bioinformatic domain analysis identifying two WWE domains and a C-terminal RING finger

    PMID:17286044

    Open questions at the time
    • No functional validation of ligase activity
    • No substrate or pathway identified
    • Tissue expression beyond heart not characterized
  2. 2022 High

    Showed DTX2 uses K63-linked, non-degradative ubiquitination to activate a transcription factor, revealing it does more than mark proteins for destruction.

    Evidence CRISPR KO screen with hTERT reporter, BioID, K63-linkage ubiquitination assay, NFIC ChIP, and telomerase activity readouts

    PMID:35198878

    Open questions at the time
    • Ubiquitination site on NFIC not mapped
    • How K63 chains promote promoter binding mechanistically unresolved
  3. 2023 High

    Demonstrated DTX2 can ubiquitinate substrates to alter their activity and localization rather than degrade them, expanding its regulatory repertoire into transcription factor control.

    Evidence AlphaScreen binding, in vitro ubiquitination, acetylation assay, MCSFR reporter, and localization/growth assays in RUNX1-dependent leukemia lines

    PMID:37500075

    Open questions at the time
    • Ubiquitin chain linkage on RUNX1 not defined
    • Mechanism linking ubiquitination to acetylation blockade unclear
  4. 2023 Medium

    Linked DTX2 to Notch-pathway-dependent cancer cell migration, connecting it to canonical Notch signaling outputs.

    Evidence shRNA/overexpression, migration/invasion assays, Notch2/NICD/p-AKT/MMP western blots, and Notch2 siRNA epistasis in colorectal cancer cells

    PMID:37087577

    Open questions at the time
    • No direct molecular target of DTX2 in the Notch2 axis identified
    • Ligase-activity dependence not tested
  5. 2024 High

    Established DTX2 as a PAR-recruited regulator of DNA double-strand break repair pathway choice, tying its WWE/DELTEX domains to genome stability and PARP-inhibitor sensitivity.

    Evidence Microirradiation localization screen, domain-deletion analysis, HR/NHEJ reporters, BRCA1/53BP1 foci imaging, and X-ray/PARPi sensitization with rescue

    PMID:38992439

    Open questions at the time
    • Direct substrate at DSBs not identified
    • Whether ligase catalytic activity is required for HR promotion unresolved
  6. 2024 Medium

    Identified DTX2 as a suppressor of NCOA4-driven ferritinophagy and ferroptosis via K48-linked degradation, defining a ferroptosis-regulatory role.

    Evidence Co-IP, ubiquitination assay, and knockdown/overexpression with ferroptosis readouts in non-small cell lung cancer cells

    PMID:39366066

    Open questions at the time
    • NCOA4 ubiquitination site not mapped
    • Single study without reciprocal in vivo confirmation
  7. 2024 High

    Extended the ferroptosis-suppressor role to a second substrate and metabolic axis, with DTX2 targeting HSD17B4 to limit peroxisomal lipid metabolism in drug-resistant tumors.

    Evidence CRISPR screen, in vitro/in vivo ubiquitination with K645 site mutagenesis, lipid metabolomics, DHA rescue, and STAT3 inhibition in hepatocellular carcinoma

    PMID:40058099

    Open questions at the time
    • Generality of JAK2-STAT3 induction across tumor types untested
    • Relative contribution of NCOA4 vs HSD17B4 axes not compared
  8. 2024 High

    Showed DTX2 targets the m6A demethylase FTO for UFD1-coupled proteasomal degradation, connecting it to RNA modification and a small-molecule (VES) modulator.

    Evidence Co-IP, ubiquitination assay, VES binding assay, and in vivo FTO knockdown/VES treatment with m6A readouts

    PMID:39661064

    Open questions at the time
    • FTO ubiquitination site not mapped
    • Mechanism of UFD1 recruitment by DTX2 unresolved
  9. 2024 Medium

    Demonstrated DTX2 targets HLTF for degradation to promote glioma growth, broadening its degradative substrate set in cancer.

    Evidence Co-IP, confocal co-localization, in vitro ubiquitination, proliferation/migration assays, and xenograft model

    PMID:38163902

    Open questions at the time
    • Ubiquitin linkage type on HLTF undefined
    • Single-lab study
  10. 2024 Medium

    Provided an in vivo developmental context, showing Dtx2 restrains glial proliferation and spinal cord recovery through Notch-Rbpj signaling.

    Evidence Heterozygous dtx2 zebrafish, post-injury motor and proliferation assays, and dominant-negative Rbpj epistasis

    PMID:39001828

    Open questions at the time
    • Molecular substrate linking Dtx2 to Rbpj output unknown
    • Relationship to mammalian DTX2 function untested
  11. 2025 Medium

    Revealed an unconventional catalytic activity in which DTX2 ubiquitylates ADP-ribose moieties directly, generating hybrid marks on PARP7, tankyrase, and the androgen receptor that govern protein stability and signaling feedback.

    Evidence Cell-based ubiquitination assays with catalytic/site mutants, chemoenzymatic Ub-ADPr probes, ADP-ribosylation site mapping, and AR Cys620 mutant analysis (preprints)

    PMID:bio_10.1101_2024.12.21.629908 PMID:bio_10.1101_2025.04.09.648013 PMID:bio_10.1101_2025.05.11.653360

    Open questions at the time
    • Findings remain in preprints not yet peer-reviewed
    • Structural basis for ADP-ribose-directed ubiquitin transfer unresolved
    • Generality of the MARUbe mechanism across substrates untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How DTX2 selects between K48 degradative, K63 non-degradative, and ADP-ribose-directed ubiquitylation on different substrates, and what governs its substrate specificity, remains unresolved.
  • No structural model of substrate or ADP-ribose engagement
  • Determinants of chain-type choice unknown
  • Physiological hierarchy among the many reported substrates undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016740 transferase activity 6 GO:0016874 ligase activity 4 GO:0140096 catalytic activity, acting on a protein 4
Localization
GO:0005634 nucleus 2 GO:0000228 nuclear chromosome 1
Pathway
R-HSA-392499 Metabolism of proteins 4 R-HSA-162582 Signal Transduction 2 R-HSA-5357801 Programmed Cell Death 2 R-HSA-74160 Gene expression (Transcription) 2 R-HSA-73894 DNA Repair 1

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 DTX2 binds to NCOA4 and facilitates its ubiquitination and degradation via K48-linked polyubiquitin chains, suppressing NCOA4-driven ferritinophagy and ferroptosis in non-small cell lung cancer cells. Co-immunoprecipitation, ubiquitination assay, knockdown/overexpression with ferroptosis readouts Drug resistance updates Medium 39366066
2024 DTX2 is rapidly recruited to DNA double-strand break sites in a poly-ADP-ribosylation-dependent manner, via its WWE and DELTEX conserved C-terminal domains. DTX2 depletion decreases homologous recombination efficiency, moderately enhances NHEJ, impedes BRCA1 foci formation, and increases 53BP1 accumulation at DSBs, indicating a role in DNA repair pathway choice. Localization screen with microirradiation, domain deletion analysis, HR/NHEJ reporter assays, immunofluorescence of BRCA1 and 53BP1 foci, cancer cell sensitization to X-rays and PARP inhibition with rescue by re-expression The Journal of biological chemistry High 38992439
2025 DTX2 ubiquitinates HSD17B4 at its SCP structural domain at K645 via K48-linked chains through its RING domain, leading to proteasomal degradation of HSD17B4, reduction of peroxisomal β-oxidation, decreased DHA-phospholipid levels, and suppression of ferroptosis in hepatocellular carcinoma cells. DTX2 expression is upregulated by JAK2-STAT3 pathway activation in Lenvatinib-resistant cells. CRISPR screen, in vitro and in vivo ubiquitination assays, domain mutagenesis, lipid metabolomics, DHA supplementation rescue, STAT3 pathway inhibition Drug resistance updates High 40058099
2022 DTX2 promotes hTERT transcription by mediating K63-linked ubiquitination of transcription factor NFIC, which facilitates NFIC binding to the hTERT promoter and enhances hTERT expression. DTX2 depletion downregulates hTERT transcription and telomerase activity, leading to progressive telomere shortening, growth arrest, and apoptosis in telomerase-positive cancer cells. CRISPR/Cas9 KO screen with hTERT promoter reporter, BioID proximity labeling, ubiquitination assay (K63-linkage), ChIP analysis of NFIC promoter binding, telomerase activity assay iScience High 35198878
2024 DTX2 acts as an E3 ubiquitin ligase for FTO (fat mass and obesity-associated protein), ubiquitinating it followed by UFD1 recruitment and proteasomal degradation. VES (vitamin E succinate) binds both FTO and DTX2, enhancing the FTO-DTX2 interaction and promoting FTO ubiquitination and degradation. Co-immunoprecipitation (FTO-DTX2 interaction), ubiquitination assay, binding assay (VES to FTO and DTX2), genetic FTO knockdown and VES treatment in vivo with m6A methylation readout Proceedings of the National Academy of Sciences of the United States of America High 39661064
2023 DTX2 binds to RUNX1 (and RUNX2/RUNX3) through their C-terminal regions. DTX2-induced ubiquitination of RUNX1 does not cause its proteasomal degradation but instead inhibits RUNX1 acetylation (which normally enhances RUNX1 transcriptional activity), reduces RUNX1-mediated transcriptional activation of an MCSFR reporter, and induces RUNX1 cytoplasmic mislocalization. DTX2 overexpression inhibits growth of RUNX1-dependent leukemia cell lines. Cell-free AlphaScreen binding assay, in vitro ubiquitination assay, acetylation assay, luciferase reporter assay (MCSFR promoter), immunofluorescence for localization, cell growth assay in leukemia lines The FEBS journal High 37500075
2024 DTX2 ubiquitinates HLTF (helicase-like transcription factor), promoting its degradation, and thereby promoting glioma cell proliferation and migration. DTX2 and HLTF co-immunoprecipitate and co-localize. Co-immunoprecipitation, confocal co-localization, in vitro ubiquitination assay, knockdown/overexpression with proliferation/migration assays, in vivo xenograft model Biology direct Medium 38163902
2023 DTX2 overexpression promotes migration and invasion of colorectal cancer cells through activation of the Notch2/Akt axis, evidenced by increased Notch2, NICD, p-Akt, and MMP-2/9 protein levels; Notch2 siRNA reversed the pro-migratory effect of DTX2 overexpression. shRNA knockdown and overexpression, scratch/Transwell assays, Western blotting for Notch2/NICD/p-AKT/MMP proteins, epistasis by Notch2 siRNA co-transfection Nan fang yi ke da xue xue bao Medium 37087577
2024 In zebrafish, Dtx2 deficiency induces ependymo-radial glial cell proliferation and improves spinal cord motor function recovery after injury. This effect is mediated via activation of Notch-Rbpj signaling, as dominant-negative Rbpj abolished the increased ependymo-radial glia proliferation caused by Dtx2 deficiency. Heterozygous dtx2 mutant zebrafish, motor function assays post-injury, cell proliferation assays, dominant-negative Rbpj epistasis experiment, her gene expression analysis Stem cells and development Medium 39001828
2006 DTX2 encodes a 622-amino-acid protein containing two WWE domains and a C-terminal RING-finger domain, located on human chromosome 7q11.23. Northern analysis showed expression in fetal and adult heart tissue. RACE cDNA cloning, Northern blot, bioinformatic domain analysis DNA sequence Low 17286044
2025 DTX2 generates the initial MARUbe (monoubiquitylation of mono-ADP-ribose) on PARP7 in cells, depending on PARP7 catalytic activity. This MARUbe is then extended with K11-linked polyubiquitin by RNF114. Cell-based ubiquitination assay, PARP7 catalytic mutant, click chemistry-inspired chemoenzymatic Ub-ADPr probe, co-immunoprecipitation bioRxivpreprint Medium bio_10.1101_2025.05.11.653360
2025 DTX2 (and DTX3) catalyze monoubiquitylation of tankyrase on mono-ADP-ribose (not canonical lysine), creating a monoubiquitin-MAR hybrid mark that prevents PAR formation and stabilizes tankyrase by antagonizing RNF146-mediated degradation. Cell-based ubiquitination assay, tankyrase ADP-ribosylation site mapping, functional stabilization assay bioRxivpreprint Medium bio_10.1101_2025.04.09.648013
2024 PARP7 mono-ADP-ribosylates the androgen receptor (AR) on Cys620 within its DNA binding domain, and this ADP-ribosyl degron is recognized by the ADP-ribose reader domain of DTX2, leading to non-conventional (lysine-independent) ubiquitin conjugation to ADP-ribosyl-cysteine and proteasomal degradation of AR, forming a negative feedback loop on AR-dependent gene expression. Biochemical ubiquitination assay, AR Cys620 mutant analysis, nuclear import-competent/DNA binding-deficient AR mutant, mathematical modeling validated in cells, proteasome inhibitor experiments bioRxivpreprint Medium bio_10.1101_2024.12.21.629908
2025 AutoMARylation of PARP7 promotes its instability through an E3 ligase-ubiquitin-proteasome pathway mediated by DTX2 (and RNF114), linking NAD+ sensing to PARP7 protein turnover. Genetic depletion of PARP7, DTX2, and RNF114; autoMARylation assay; proteasome inhibitor experiments in adipogenesis context bioRxivpreprint Low bio_10.1101_2025.04.07.647692

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2024 E3 ubiquitin ligase DTX2 fosters ferroptosis resistance via suppressing NCOA4-mediated ferritinophagy in non-small cell lung cancer. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 36 39366066
2024 An E3 ubiquitin ligase localization screen uncovers DTX2 as a novel ADP-ribosylation-dependent regulator of DNA double-strand break repair. The Journal of biological chemistry 17 38992439
2025 DTX2 attenuates Lenvatinib-induced ferroptosis by suppressing docosahexaenoic acid biosynthesis through HSD17B4-dependent peroxisomal β-oxidation in hepatocellular carcinoma. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 13 40058099
2022 An inducible CRISPR/Cas9 screen identifies DTX2 as a transcriptional regulator of human telomerase. iScience 12 35198878
2012 Acute myeloid leukemia with t(7;21)(q11.2;q22) expresses a novel, reversed-sequence RUNX1-DTX2 chimera. International journal of hematology 10 22661044
2024 Targeting DTX2/UFD1-mediated FTO degradation to regulate antitumor immunity. Proceedings of the National Academy of Sciences of the United States of America 9 39661064
2024 DTX2 promotes glioma development via regulation of HLTF. Biology direct 4 38163902
2023 The E3 ligase DTX2 inhibits RUNX1 function by binding its C terminus and prevents the growth of RUNX1-dependent leukemia cells. The FEBS journal 4 37500075
2006 cDNA cloning, characterization and expression analysis of DTX2, a human WWE and RING-finger gene, in human embryos. DNA sequence : the journal of DNA sequencing and mapping 3 17286044
2023 [DTX2 overexpression promotes migration and invasion of colorectal cancer cells through the Notch2/Akt axis]. Nan fang yi ke da xue xue bao = Journal of Southern Medical University 2 37087577
2024 Dtx2 Deficiency Induces Ependymo-Radial Glial Cell Proliferation and Improves Spinal Cord Motor Function Recovery. Stem cells and development 1 39001828
2025 [High expression of DTX2 promotes proliferation, invasion and epithelial-mesenchymal transition of oxaliplatin-resistant colorectal cancer cells]. Nan fang yi ke da xue xue bao = Journal of Southern Medical University 0 40294933

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