Affinage

DTX2

Probable E3 ubiquitin-protein ligase DTX2 · UniProt Q86UW9

Length
622 aa
Mass
67.2 kDa
Annotated
2026-04-28
12 papers in source corpus 14 papers cited in narrative 14 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DTX2 is a RING-finger E3 ubiquitin ligase whose WWE domains read ADP-ribose modifications, enabling it to couple ADP-ribosylation signaling to ubiquitin-dependent substrate fate decisions across DNA repair, telomere maintenance, ferroptosis regulation, and Notch signaling. At DNA double-strand breaks, DTX2 is recruited in a poly-ADP-ribosylation-dependent manner and promotes homologous recombination by facilitating BRCA1 focus formation while limiting 53BP1 accumulation (PMID:38992439). DTX2 catalyzes K48-linked ubiquitination of substrates including NCOA4, HSD17B4, FTO, and HLTF to target them for proteasomal degradation—thereby suppressing ferroptosis, modulating m6A RNA methylation, and influencing tumor progression—and performs K63-linked ubiquitination of NFIC to promote hTERT transcription and telomerase activity (PMID:39366066, PMID:40058099, PMID:39661064, PMID:38163902, PMID:35198878). DTX2 also catalyzes non-canonical ubiquitin conjugation directly onto ADP-ribose moieties (MARUbylation), as demonstrated on PARP7 and the androgen receptor, linking mono-ADP-ribosylation to proteasomal degradation (PMID:38992439, PMID:37500075).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2006 Medium

    Identification of DTX2 as a WWE- and RING-domain-containing protein established it as a member of the Deltex E3 ligase family, providing the structural framework for all subsequent functional studies.

    Evidence cDNA cloning, RACE, and Northern blot from human fetal/adult tissues

    PMID:17286044

    Open questions at the time
    • No enzymatic activity demonstrated at this stage
    • Substrate specificity unknown
    • Role of WWE domains not yet functionally defined
  2. 2022 High

    Discovery that DTX2 promotes hTERT transcription by K63-linked ubiquitination of NFIC revealed that DTX2 can perform non-degradative ubiquitination to regulate transcription factor activity, establishing its first defined substrate and cellular function.

    Evidence CRISPR/Cas9 reporter screen, BioID proximity labeling, ChIP, ubiquitination assay, telomerase activity and telomere length measurements

    PMID:35198878

    Open questions at the time
    • How K63-linked ubiquitination of NFIC mechanistically enhances promoter binding is unclear
    • Whether DTX2 regulation of telomerase is cell-type-specific was not assessed
  3. 2023 Medium

    Demonstration that DTX2 binds RUNX1, induces its non-degradative ubiquitination, blocks acetylation, and causes cytoplasmic mislocalization showed DTX2 can inhibit transcription factor activity through a ubiquitin-dependent but non-proteolytic mechanism.

    Evidence AlphaScreen binding assay, Co-IP, luciferase reporter, ubiquitination assay, immunofluorescence in leukemia cells

    PMID:37500075

    Open questions at the time
    • Ubiquitin chain type on RUNX1 not determined
    • In vivo relevance to leukemia not tested
    • Whether DTX2 similarly regulates RUNX2/RUNX3 function in physiological contexts is unresolved
  4. 2024 High

    Recruitment of DTX2 to DNA double-strand breaks via PAR-dependent WWE domain binding, and its requirement for efficient homologous recombination and BRCA1 focus formation, established DTX2 as a DNA damage response factor linking ADP-ribosylation to repair pathway choice.

    Evidence Microirradiation-based localization screen, domain deletions, HR/NHEJ reporter assays, 53BP1/BRCA1 foci analysis, clonogenic survival after X-rays and PARPi

    PMID:38992439

    Open questions at the time
    • Direct ubiquitination substrate(s) at DSBs not identified
    • Whether DTX2 catalytic activity or scaffolding is required for HR promotion is unresolved
    • Relationship between DTX2 and other PAR-dependent repair factors not mapped
  5. 2024 High

    Identification of DTX2 as the E3 ligase mediating K48-linked ubiquitination and degradation of multiple substrates—NCOA4, HLTF, and FTO—expanded the catalog of DTX2 targets and connected it to ferroptosis suppression, glioma progression, and m6A RNA methylation regulation.

    Evidence Co-IP, in vitro ubiquitination assays, knockdown/overexpression, xenograft models, VES binding assays, m6A profiling

    PMID:38163902 PMID:39366066 PMID:39661064

    Open questions at the time
    • HLTF ubiquitination chain linkage type not specified
    • Whether DTX2-mediated NCOA4 degradation operates via WWE-ADP-ribose recognition or direct binding is unclear
    • Physiological regulation of DTX2 expression/activity beyond JAK2-STAT3 is largely unexplored
  6. 2024 Medium

    Zebrafish genetic experiments showed Dtx2 acts as a negative regulator of Notch-Rbpj signaling in spinal cord regeneration, placing DTX2 upstream of Notch in an in vivo neural context distinct from mammalian cancer settings.

    Evidence Heterozygous dtx2 mutant zebrafish, dominant-negative Rbpj epistasis, immunohistochemistry, motor function assay

    PMID:39001828

    Open questions at the time
    • Direct biochemical mechanism by which Dtx2 restrains Notch-Rbpj signaling not identified
    • Whether this reflects conserved mammalian biology is uncertain
  7. 2025 High

    DTX2 was shown to catalyze K48-linked ubiquitination and degradation of HSD17B4 at K645, reducing DHA-containing PUFAs and suppressing ferroptosis in drug-resistant hepatocellular carcinoma, with DTX2 transcription activated by the JAK2-STAT3 pathway.

    Evidence CRISPR screen, in vitro ubiquitination with K645 mutagenesis, lipidomics, in vivo xenograft, DHA supplementation rescue

    PMID:40058099

    Open questions at the time
    • Whether DTX2-HSD17B4 axis operates in non-cancer ferroptosis contexts is untested
    • Structural basis for HSD17B4 recognition by DTX2 is unknown
  8. 2025 Medium

    The discovery that DTX2 catalyzes monoubiquitylation directly on ADP-ribose moieties (MARUbylation) of PARP7—creating a hybrid Ub-ADP-ribose mark subsequently extended by RNF114—established a non-canonical ubiquitin conjugation mechanism and unified the WWE-domain ADP-ribose reader function with catalytic output.

    Evidence (preprint) Cellular ubiquitination assay with PARP7 catalytic mutant, click chemistry probe, Co-IP

    PMID:bio_10.1101_2025.05.11.653360

    Open questions at the time
    • Preprint not yet peer-reviewed
    • In vitro reconstitution with purified components not yet shown
    • Breadth of MARUbylation substrates beyond PARP7 not systematically surveyed

Open questions

Synthesis pass · forward-looking unresolved questions
  • Key open questions include: the structural basis for DTX2 WWE domain recognition of mono- versus poly-ADP-ribose, the full scope of MARUbylation substrates, the identity of DTX2 ubiquitination targets at DNA damage sites that mediate HR pathway choice, and the physiological contexts governing whether DTX2 performs canonical versus non-canonical ubiquitination.
  • No crystal or cryo-EM structure of DTX2 WWE domains bound to ADP-ribose
  • No systematic proteomics of DTX2-dependent ubiquitination events at DSBs
  • Regulatory inputs controlling DTX2 beyond JAK2-STAT3 are largely unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016874 ligase activity 7 GO:0140096 catalytic activity, acting on a protein 7
Localization
GO:0005634 nucleus 2 GO:0005694 chromosome 1
Pathway
R-HSA-392499 Metabolism of proteins 7 R-HSA-162582 Signal Transduction 2 R-HSA-5357801 Programmed Cell Death 2 R-HSA-73894 DNA Repair 1

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 DTX2 binds to NCOA4 and facilitates its K48-linked ubiquitination and proteasomal degradation, thereby suppressing NCOA4-mediated ferritinophagy and ferroptosis in non-small cell lung cancer cells. Co-immunoprecipitation, in vitro ubiquitination assay, knockdown/overexpression with ferroptosis phenotypic readout Drug resistance updates Medium 39366066
2024 DTX2 is rapidly recruited to DNA double-strand break sites in a poly-ADP-ribosylation-dependent manner via its WWE and DELTEX C-terminal domains, which bind mono- and poly-ADP-ribosylated proteins; DTX2 depletion decreases homologous recombination efficiency, impairs BRCA1 foci formation, increases 53BP1 accumulation at DSBs, and sensitizes cells to X-rays and PARP inhibition. Localization screen with microirradiation, domain-deletion analysis, HR/NHEJ reporter assays, immunofluorescence for BRCA1/53BP1 foci, clonogenic survival assay The Journal of biological chemistry High 38992439
2025 DTX2 ubiquitinates the peroxisomal β-oxidation enzyme HSD17B4 via its RING domain at the K645 site via K48-linked ubiquitination, promoting HSD17B4 degradation, reducing DHA-containing PUFA levels, and thereby suppressing ferroptosis in Lenvatinib-resistant hepatocellular carcinoma cells; DTX2 transcription is activated by the JAK2-STAT3 pathway. CRISPR screening, in vitro ubiquitination assay, site-directed mutagenesis (K645), lipidomics, in vivo xenograft, DHA supplementation rescue Drug resistance updates High 40058099
2022 DTX2 promotes hTERT transcription by mediating K63-linked ubiquitination of the transcription factor NFIC, which facilitates NFIC binding to the hTERT core promoter; DTX2 depletion reduces hTERT transcription, telomerase activity, and causes progressive telomere shortening and growth arrest. CRISPR/Cas9 reporter screen, BioID proximity labeling, co-immunoprecipitation, ubiquitination assay, ChIP, telomerase activity assay, telomere length measurement iScience High 35198878
2024 FTO (m6A RNA demethylase) is ubiquitinated by its E3 ligase DTX2, followed by UFD1 recruitment and proteasomal degradation; vitamin E succinate (VES) binds to both FTO and DTX2, enhancing FTO-DTX2 interaction, FTO ubiquitination, and degradation. Co-immunoprecipitation, ubiquitination assay, binding assay, genetic FTO knockdown, m6A methylation profiling, in vivo mouse tumor models PNAS High 39661064
2024 DTX2 ubiquitinates HLTF (helicase-like transcription factor), promoting its degradation; HLTF normally inhibits glioma cell proliferation and migration, so DTX2-mediated HLTF degradation promotes glioma progression. Co-immunoprecipitation, confocal microscopy colocalization, in vitro ubiquitination assay, knockdown/overexpression with proliferation/migration assays, in vivo xenograft Biology direct Medium 38163902
2023 DTX2 binds RUNX1 (and RUNX2/RUNX3) through their C-terminal regions, induces non-degradative ubiquitination of RUNX1, inhibits RUNX1 acetylation, reduces RUNX1 transcriptional activity on the MCSFR reporter, and induces RUNX1 cytoplasmic mislocalization, thereby inhibiting growth of RUNX1-dependent leukemia cells. AlphaScreen cell-free binding assay, Co-immunoprecipitation, luciferase reporter assay, ubiquitination assay, immunofluorescence localization, cell growth assay The FEBS journal Medium 37500075
2023 DTX2 overexpression promotes colorectal cancer cell migration and invasion through activation of the Notch2/NICD/AKT/MMP-2 axis; Notch2 knockdown reverses the pro-migratory effects of DTX2 overexpression. shRNA knockdown, overexpression plasmid, scratch and Transwell assays, Western blotting, siRNA epistasis (Notch2 siRNA rescue) Nan fang yi ke da xue xue bao Low 37087577
2006 DTX2 encodes a 622-amino acid protein containing two WWE domains and a RING-finger region, encoded by a gene on chromosome 7q11.23; it is expressed in fetal and adult heart tissue. cDNA library cloning, RACE, Northern blot analysis DNA sequence Medium 17286044
2024 In zebrafish, Dtx2 deficiency activates Notch-Rbpj signaling (increased her gene expression), leading to increased ependymo-radial glial cell proliferation and augmented motor neuron formation after spinal cord injury; dominant-negative Rbpj abolishes this effect, placing Dtx2 upstream of Notch-Rbpj in neural regeneration. Heterozygous dtx2 mutant zebrafish, dominant-negative Rbpj epistasis, immunohistochemistry, motor function assay, gene expression analysis Stem cells and development Medium 39001828
2025 DTX2 generates the initial monoubiquitylation on ADP-ribose (MARUbylation) on PARP7 in cells in a manner dependent on PARP7 catalytic activity, creating a hybrid Ub-ADP-ribose mark that is then extended with K11 polyubiquitin by RNF114. Cellular ubiquitination assay, PARP7 catalytic mutant, chemical biology/click chemistry probe, Co-immunoprecipitation bioRxivpreprint Medium bio_10.1101_2025.05.11.653360
2025 DTX2 (and DTX3) catalyze monoubiquitylation of tankyrase on mono-ADP-ribose residues (not on canonical lysine), creating a monoubiquitin-MAR hybrid mark; this prevents PAR formation by tankyrase, antagonizes RNF146-mediated degradation, and stabilizes tankyrase. Cellular ubiquitination assay, co-immunoprecipitation, domain functional analysis bioRxivpreprint Low bio_10.1101_2025.04.09.648013
2024 PARP7 mono-ADP-ribosylates the androgen receptor (AR) on Cys620 within its DNA-binding domain; this ADP-ribosyl degron is recognized by the ADP-ribose reader domain of DTX2, leading to non-canonical (lysine-independent) ubiquitin conjugation to ADP-ribosyl-cysteine and AR proteasomal degradation, forming a negative feedback loop on AR-dependent gene expression. ADP-ribosylation assay, site-directed mutagenesis (Cys620), co-immunoprecipitation, proteasome inhibitor assay, mathematical modeling with cellular validation using nuclear-import/DNA-binding mutant AR bioRxivpreprint Medium bio_10.1101_2024.12.21.629908
2025 DTX2 (along with RNF114) mediates ADP-ribose-dependent ubiquitination and proteasomal degradation of autoMARylated PARP7, contributing to PARP7 instability during adipogenesis. Genetic depletion in mouse adipose tissue, co-immunoprecipitation, ubiquitination assay bioRxivpreprint Low bio_10.1101_2025.04.07.647692

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2024 E3 ubiquitin ligase DTX2 fosters ferroptosis resistance via suppressing NCOA4-mediated ferritinophagy in non-small cell lung cancer. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 30 39366066
2024 An E3 ubiquitin ligase localization screen uncovers DTX2 as a novel ADP-ribosylation-dependent regulator of DNA double-strand break repair. The Journal of biological chemistry 15 38992439
2025 DTX2 attenuates Lenvatinib-induced ferroptosis by suppressing docosahexaenoic acid biosynthesis through HSD17B4-dependent peroxisomal β-oxidation in hepatocellular carcinoma. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 12 40058099
2022 An inducible CRISPR/Cas9 screen identifies DTX2 as a transcriptional regulator of human telomerase. iScience 12 35198878
2012 Acute myeloid leukemia with t(7;21)(q11.2;q22) expresses a novel, reversed-sequence RUNX1-DTX2 chimera. International journal of hematology 10 22661044
2024 Targeting DTX2/UFD1-mediated FTO degradation to regulate antitumor immunity. Proceedings of the National Academy of Sciences of the United States of America 7 39661064
2024 DTX2 promotes glioma development via regulation of HLTF. Biology direct 4 38163902
2023 The E3 ligase DTX2 inhibits RUNX1 function by binding its C terminus and prevents the growth of RUNX1-dependent leukemia cells. The FEBS journal 3 37500075
2006 cDNA cloning, characterization and expression analysis of DTX2, a human WWE and RING-finger gene, in human embryos. DNA sequence : the journal of DNA sequencing and mapping 3 17286044
2023 [DTX2 overexpression promotes migration and invasion of colorectal cancer cells through the Notch2/Akt axis]. Nan fang yi ke da xue xue bao = Journal of Southern Medical University 2 37087577
2024 Dtx2 Deficiency Induces Ependymo-Radial Glial Cell Proliferation and Improves Spinal Cord Motor Function Recovery. Stem cells and development 1 39001828
2025 [High expression of DTX2 promotes proliferation, invasion and epithelial-mesenchymal transition of oxaliplatin-resistant colorectal cancer cells]. Nan fang yi ke da xue xue bao = Journal of Southern Medical University 0 40294933